RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 POU2AF1Q16633 256 aa11.6□□□□□ -0.55
UBA1-202ENST00000377269 C1orf229Q6ZS94 237 aaPredicted RBP11.6□□□□□ -0.55
UBA1-202ENST00000377269 PIP4P2Q8N4L2 257 aa11.6□□□□□ -0.55
UBA1-202ENST00000377269 RAB37Q96AX2 223 aa11.6□□□□□ -0.55
UBA1-202ENST00000377269 HINT2Q9BX68 163 aa11.6□□□□□ -0.55
UBA1-202ENST00000377269 EPDR1Q9UM22 224 aa11.6□□□□□ -0.55
UBA1-202ENST00000377269 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.59□□□□□ -0.55
UBA1-202ENST00000377269 HAX1O00165 279 aa11.59□□□□□ -0.55
UBA1-202ENST00000377269 CSN1S1P47710 185 aa11.59□□□□□ -0.55
UBA1-202ENST00000377269 Q5PR19 223 aa11.59□□□□□ -0.55
UBA1-202ENST00000377269 FA2HQ7L5A8 372 aa11.59□□□□□ -0.55
UBA1-202ENST00000377269 FXYD5Q96DB9 178 aa11.59□□□□□ -0.55
UBA1-202ENST00000377269 PIMREGQ9BSJ6 248 aa11.59□□□□□ -0.55
UBA1-202ENST00000377269 LINC00574Q9H8X3 128 aa11.59□□□□□ -0.55
UBA1-202ENST00000377269 PRNDQ9UKY0 176 aa11.59□□□□□ -0.55
UBA1-202ENST00000377269 PDZD2O15018 2839 aa11.59□□□□□ -0.55
UBA1-202ENST00000377269 P01737 135 aa11.59□□□□□ -0.55
UBA1-202ENST00000377269 APOHP02749 345 aaPredicted RBP11.59□□□□□ -0.55
UBA1-202ENST00000377269 GNG5P63218 68 aa11.59□□□□□ -0.55
UBA1-202ENST00000377269 MLANAQ16655 118 aa11.59□□□□□ -0.55
UBA1-202ENST00000377269 FOXI2Q6ZQN5 318 aa11.59□□□□□ -0.55
UBA1-202ENST00000377269 THYN1Q9P016 225 aa11.59□□□□□ -0.55
UBA1-202ENST00000377269 GAGE12HA6NDE8 117 aa11.58□□□□□ -0.56
UBA1-202ENST00000377269 MOSP00540 346 aa11.58□□□□□ -0.56
UBA1-202ENST00000377269 CD69Q07108 199 aa11.58□□□□□ -0.56
UBA1-202ENST00000377269 CT45A1Q5HYN5 189 aa11.58□□□□□ -0.56
UBA1-202ENST00000377269 SAMD5Q5TGI4 173 aa11.58□□□□□ -0.56
UBA1-202ENST00000377269 CT45A3Q8NHU0 189 aa11.58□□□□□ -0.56
UBA1-202ENST00000377269 ABCA2Q9BZC7 2435 aa11.58□□□□□ -0.56
UBA1-202ENST00000377269 SCGB2A2Q13296 93 aa11.58□□□□□ -0.56
UBA1-202ENST00000377269 DEFB113Q30KQ7 82 aa11.58□□□□□ -0.56
UBA1-202ENST00000377269 OR10W1Q8NGF6 305 aa11.58□□□□□ -0.56
UBA1-202ENST00000377269 OR1L8Q8NGR8 309 aa11.58□□□□□ -0.56
UBA1-202ENST00000377269 PRRC2AP48634 2157 aaKnown RBP11.57□□□□□ -0.56
UBA1-202ENST00000377269 NPIPB6E9PJ23 425 aa11.57□□□□□ -0.56
UBA1-202ENST00000377269 LGALS9BQ3B8N2 356 aa11.57□□□□□ -0.56
UBA1-202ENST00000377269 LGALS9CQ6DKI2 356 aa11.57□□□□□ -0.56
UBA1-202ENST00000377269 LY6G5BQ8NDX9 201 aa11.57□□□□□ -0.56
UBA1-202ENST00000377269 CACNG8Q8WXS5 425 aa11.57□□□□□ -0.56
UBA1-202ENST00000377269 SPATA25Q9BR10 227 aa11.57□□□□□ -0.56
UBA1-202ENST00000377269 ONECUT1Q9UBC0 465 aa11.57□□□□□ -0.56
UBA1-202ENST00000377269 INSIG2Q9Y5U4 225 aa11.57□□□□□ -0.56
UBA1-202ENST00000377269 LTAP01374 205 aa11.57□□□□□ -0.56
UBA1-202ENST00000377269 CSN3P07498 182 aa11.57□□□□□ -0.56
UBA1-202ENST00000377269 RNASE2P10153 161 aaKnown RBP11.57□□□□□ -0.56
UBA1-202ENST00000377269 TMEM177Q53S58 311 aa11.57□□□□□ -0.56
UBA1-202ENST00000377269 PATE2Q6UY27 113 aa11.57□□□□□ -0.56
UBA1-202ENST00000377269 OR1L4Q8NGR5 311 aa11.57□□□□□ -0.56
UBA1-202ENST00000377269 FLNBO75369 2602 aaKnown RBP11.56□□□□□ -0.56
UBA1-202ENST00000377269 TEX50A0A1B0GTY4 177 aa11.56□□□□□ -0.56
UBA1-202ENST00000377269 COX7A2P2O60397 106 aa11.56□□□□□ -0.56
UBA1-202ENST00000377269 IGHV1-8P0DP01 117 aa11.56□□□□□ -0.56
UBA1-202ENST00000377269 C10orf113Q5VZT2 155 aa11.56□□□□□ -0.56
UBA1-202ENST00000377269 MAPK1IP1LQ8NDC0 245 aa11.56□□□□□ -0.56
UBA1-202ENST00000377269 C8orf46Q8TAG6 207 aa11.56□□□□□ -0.56
UBA1-202ENST00000377269 TSSC4Q9Y5U2 329 aaPredicted RBP11.56□□□□□ -0.56
UBA1-202ENST00000377269 VGLL1Q99990 258 aa11.55□□□□□ -0.56
UBA1-202ENST00000377269 TIMM8BQ9Y5J9 83 aaPredicted RBP11.55□□□□□ -0.56
UBA1-202ENST00000377269 ZFHX3Q15911 3703 aa11.55□□□□□ -0.56
UBA1-202ENST00000377269 CREBBPQ92793 2442 aa11.55□□□□□ -0.56
UBA1-202ENST00000377269 UPK2O00526 184 aa11.55□□□□□ -0.56
UBA1-202ENST00000377269 SLC25A5P05141 298 aaKnown RBP11.55□□□□□ -0.56
UBA1-202ENST00000377269 SMIM13P0DJ93 91 aa11.55□□□□□ -0.56
UBA1-202ENST00000377269 RAB9AP51151 201 aa11.55□□□□□ -0.56
UBA1-202ENST00000377269 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.55□□□□□ -0.56
UBA1-202ENST00000377269 FMC1Q96HJ9 113 aa11.55□□□□□ -0.56
UBA1-202ENST00000377269 SGK494Q96LW2 274 aa11.55□□□□□ -0.56
UBA1-202ENST00000377269 A0A096LNJ9 63 aa11.54□□□□□ -0.56
UBA1-202ENST00000377269 TCTEX1D4Q5JR98 221 aa11.54□□□□□ -0.56
UBA1-202ENST00000377269 CCDC144NLQ6NUI1 221 aa11.54□□□□□ -0.56
UBA1-202ENST00000377269 PDPNQ86YL7 162 aa11.54□□□□□ -0.56
UBA1-202ENST00000377269 GATD1Q8NB37 220 aa11.54□□□□□ -0.56
UBA1-202ENST00000377269 DAZAP1Q96EP5 407 aaKnown RBP11.54□□□□□ -0.56
UBA1-202ENST00000377269 J3QR89 54 aa11.54□□□□□ -0.56
UBA1-202ENST00000377269 TMEM116Q8NCL8 245 aa11.54□□□□□ -0.56
UBA1-202ENST00000377269 OR5AN1Q8NGI8 311 aa11.54□□□□□ -0.56
UBA1-202ENST00000377269 AKAP9Q99996 3911 aa11.54□□□□□ -0.56
UBA1-202ENST00000377269 PGPA6NDG6 321 aa11.53□□□□□ -0.56
UBA1-202ENST00000377269 COX7A1P24310 79 aa11.53□□□□□ -0.56
UBA1-202ENST00000377269 CKS1BP61024 79 aa11.53□□□□□ -0.56
UBA1-202ENST00000377269 RAB9BQ9NP90 201 aa11.53□□□□□ -0.56
UBA1-202ENST00000377269 SPANXB1Q9NS25 103 aaPredicted RBP11.53□□□□□ -0.56
UBA1-202ENST00000377269 BEX4Q9NWD9 120 aaPredicted RBP11.53□□□□□ -0.56
UBA1-202ENST00000377269 SIGLEC8Q9NYZ4 499 aa11.53□□□□□ -0.56
UBA1-202ENST00000377269 ZNF207O43670 478 aaKnown RBP11.53□□□□□ -0.56
UBA1-202ENST00000377269 FCGR2BP31994 310 aaPredicted RBP11.53□□□□□ -0.56
UBA1-202ENST00000377269 SLC25A48Q6ZT89 311 aaKnown RBP11.53□□□□□ -0.56
UBA1-202ENST00000377269 STXBP6Q8NFX7 210 aa11.53□□□□□ -0.56
UBA1-202ENST00000377269 PRSS3P2Q8NHM4 247 aa11.53□□□□□ -0.56
UBA1-202ENST00000377269 CSPG4Q6UVK1 2322 aa11.53□□□□□ -0.56
UBA1-202ENST00000377269 SAA2P0DJI9 122 aaPredicted RBP11.52□□□□□ -0.56
UBA1-202ENST00000377269 DIAPH2-AS1Q14236 149 aa11.52□□□□□ -0.56
UBA1-202ENST00000377269 KRTAP1-3Q8IUG1 177 aa11.52□□□□□ -0.56
UBA1-202ENST00000377269 TMEM133Q9H2Q1 129 aa11.52□□□□□ -0.56
UBA1-202ENST00000377269 F8W1H4 67 aa11.52□□□□□ -0.57
UBA1-202ENST00000377269 SSBP2P81877 361 aaPredicted RBP11.52□□□□□ -0.57
UBA1-202ENST00000377269 KLRD1Q13241 179 aa11.52□□□□□ -0.57
UBA1-202ENST00000377269 OR8A1Q8NGG7 326 aa11.52□□□□□ -0.57
UBA1-202ENST00000377269 ITPR3Q14573 2671 aa11.52□□□□□ -0.57
UBA1-202ENST00000377269 A0A096LNT2 108 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms