RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 PDE6HQ13956 83 aa10.72□□□□□ -0.69
HMGCS2-201ENST00000369406 ELOBQ15370 118 aa10.72□□□□□ -0.69
HMGCS2-201ENST00000369406 RNASE7Q9H1E1 156 aaKnown RBP10.72□□□□□ -0.69
HMGCS2-201ENST00000369406 TUBA4BQ9H853 241 aa10.72□□□□□ -0.69
HMGCS2-201ENST00000369406 SORL1Q92673 2214 aa10.71□□□□□ -0.69
HMGCS2-201ENST00000369406 IGHV7-4-1A0A0J9YVY3 117 aa10.71□□□□□ -0.69
HMGCS2-201ENST00000369406 DIRC3C9JPN6 131 aa10.71□□□□□ -0.69
HMGCS2-201ENST00000369406 CD28P10747 220 aa10.71□□□□□ -0.69
HMGCS2-201ENST00000369406 HOXD3P31249 432 aaPredicted RBP10.71□□□□□ -0.69
HMGCS2-201ENST00000369406 SLURP1P55000 103 aa10.71□□□□□ -0.69
HMGCS2-201ENST00000369406 SYNJ2BPP57105 145 aa10.71□□□□□ -0.69
HMGCS2-201ENST00000369406 C1orf194Q5T5A4 169 aa10.71□□□□□ -0.69
HMGCS2-201ENST00000369406 S100A7AQ86SG5 101 aa10.71□□□□□ -0.69
HMGCS2-201ENST00000369406 ZNF418Q8TF45 676 aaPredicted RBP10.71□□□□□ -0.69
HMGCS2-201ENST00000369406 SFRP2Q96HF1 295 aa10.71□□□□□ -0.69
HMGCS2-201ENST00000369406 IGKV2-40A0A087WW87 121 aaPredicted RBP10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 IGKV2D-40P01614 121 aaPredicted RBP10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 RPEL1Q2QD12 228 aa10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 LINC00322Q6ZN03 302 aaPredicted RBP10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 Q86TA4 180 aa10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 CHEK1O14757 476 aa10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 TAS2R60P59551 318 aa10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 KHDC1LQ5JSQ8 128 aa10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 C8orf86Q6ZUL3 223 aa10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 C1QL4Q86Z23 238 aa10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 LYPD1Q8N2G4 141 aa10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 C20orf173Q96LM9 149 aa10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 RHPN1-AS1Q9BWJ2 59 aa10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 DAZ1Q9NQZ3 744 aaKnown RBP10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 LY96Q9Y6Y9 160 aa10.7□□□□□ -0.7
HMGCS2-201ENST00000369406 GCGP01275 180 aa10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 MGST1P10620 155 aaKnown RBP10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 ADAMTSL5Q6ZMM2 481 aa10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 BAGE2Q86Y30 109 aa10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 C15orf54Q8N8G6 183 aa10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 CMTM2Q8TAZ6 248 aa10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 MLST8Q9BVC4 326 aa10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 C16orf95Q9H693 158 aa10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 RNF24Q9Y225 148 aa10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 LTAP01374 205 aa10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 MT-ND4LP03901 98 aa10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 GALR1P47211 349 aa10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 CDX1P47902 265 aaPredicted RBP10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 DEFB1P60022 68 aa10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 TMEM242Q9NWH2 141 aa10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 SMPXQ9UHP9 88 aa10.69□□□□□ -0.7
HMGCS2-201ENST00000369406 IGKV3-7A0A075B6H7 116 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 H7BYZ3 331 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 SOCS3O14543 225 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 PFN1P07737 140 aaKnown RBP10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 PRNTQ86SH4 94 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 VGLL1Q99990 258 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 A0A1W2PRX2 142 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 HAX1O00165 279 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 UBE2G1P62253 170 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 PSG9Q00887 426 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 FAM106AQ4KMX7 169 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 KLHL30-AS1Q8NEE0 82 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 GPR82Q96P67 336 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 CTDSP1Q9GZU7 261 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 V9GYV3 84 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 ATRQ13535 2644 aa10.68□□□□□ -0.7
HMGCS2-201ENST00000369406 ZNF253O75346 499 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 CA1P00915 261 aaPredicted RBP10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 SCGB2A2Q13296 93 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 OR11H1Q8NG94 326 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 Q8TAT8 98 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 C4orf3Q8WVX3 66 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 FMC1Q96HJ9 113 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 AAMDCQ9H7C9 122 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 K7EMT4 169 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 FAM3BP58499 235 aaPredicted RBP10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 KRTAP10-3P60369 221 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 ERCC8Q13216 396 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 KLF5Q13887 457 aaPredicted RBP10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 LCN12Q6JVE5 192 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 PRR27Q6MZM9 219 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 OR10G8Q8NGN5 311 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 C14orf144Q96I85 54 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 CITED2Q99967 270 aaPredicted RBP10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 AGRNO00468 2067 aa10.67□□□□□ -0.7
HMGCS2-201ENST00000369406 CXorf65A6NEN9 183 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 A8MWP6 167 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 PSG3Q16557 428 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 CDPF1Q6NVV7 123 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 REC114Q7Z4M0 266 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 TMEM75Q8N9X5 138 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 ANAPC16Q96DE5 110 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 C8orf49Q96NF6 230 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 PSG8Q9UQ74 426 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 RAB5AP20339 215 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 ERVFC1-1P60608 527 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 ZC2HC1AQ96GY0 325 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 RAX2Q96IS3 184 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 GPR61Q9BZJ8 451 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 MAST4O15021 2626 aa10.66□□□□□ -0.7
HMGCS2-201ENST00000369406 ZNF705DP0CH99 300 aaPredicted RBP10.65□□□□□ -0.7
HMGCS2-201ENST00000369406 ZNF705BP0CI00 300 aaPredicted RBP10.65□□□□□ -0.7
HMGCS2-201ENST00000369406 S100A7P31151 101 aa10.65□□□□□ -0.7
HMGCS2-201ENST00000369406 CRLF1O75462 422 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms