RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 C1orf159Q96HA4 380 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 SERF1AO75920 110 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 DNAL4O96015 105 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 PDE6HQ13956 83 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 ATP5L2Q7Z4Y8 100 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 FAM19A2Q8N3H0 131 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 CYSLTR1Q9Y271 337 aa9.26□□□□□ -0.93
SYNE1-204ENST00000367248 TRAV8-1A0A0A6YYK1 113 aa9.25□□□□□ -0.93
SYNE1-204ENST00000367248 SPRNQ5BIV9 151 aa9.25□□□□□ -0.93
SYNE1-204ENST00000367248 LY96Q9Y6Y9 160 aa9.25□□□□□ -0.93
SYNE1-204ENST00000367248 TPSG1Q9NRR2 321 aa9.25□□□□□ -0.93
SYNE1-204ENST00000367248 VPREB3Q9UKI3 123 aa9.25□□□□□ -0.93
SYNE1-204ENST00000367248 EP400Q96L91 3159 aa9.25□□□□□ -0.93
SYNE1-204ENST00000367248 CKS1BP61024 79 aa9.25□□□□□ -0.93
SYNE1-204ENST00000367248 SSBP2P81877 361 aaPredicted RBP9.25□□□□□ -0.93
SYNE1-204ENST00000367248 DAZAP2Q15038 168 aaPredicted RBP9.25□□□□□ -0.93
SYNE1-204ENST00000367248 C8orf31Q8N9H6 132 aa9.25□□□□□ -0.93
SYNE1-204ENST00000367248 TRBV24-1A0A075B6N3 115 aa9.25□□□□□ -0.93
SYNE1-204ENST00000367248 CCL24O00175 119 aa9.25□□□□□ -0.93
SYNE1-204ENST00000367248 APOC4P55056 127 aa9.25□□□□□ -0.93
SYNE1-204ENST00000367248 NPC2P61916 151 aa9.25□□□□□ -0.93
SYNE1-204ENST00000367248 POU2AF1Q16633 256 aa9.25□□□□□ -0.93
SYNE1-204ENST00000367248 NAV2Q8IVL1 2488 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 IGF2RP11717 2491 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 SRSF1Q07955 248 aaKnown RBP eCLIP9.24□□□□□ -0.93
SYNE1-204ENST00000367248 ORMDL2Q53FV1 153 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 Q8NA96 180 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 PMCHL2Q9BQD1 86 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 NCR2O95944 276 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 HBDP02042 147 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 ELANEP08246 267 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 ZNF843Q8N446 348 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 TMEM242Q9NWH2 141 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 JOSD1Q15040 202 aaPredicted RBP9.24□□□□□ -0.93
SYNE1-204ENST00000367248 PRORYQ9H606 182 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 TTC9CQ8N5M4 171 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 FGF23Q9GZV9 251 aaPredicted RBP9.24□□□□□ -0.93
SYNE1-204ENST00000367248 TSSC4Q9Y5U2 329 aaPredicted RBP9.24□□□□□ -0.93
SYNE1-204ENST00000367248 GAGE12JA6NER3 117 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 SRSF2Q01130 221 aaKnown RBP9.24□□□□□ -0.93
SYNE1-204ENST00000367248 GAGE1Q13065 139 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 GAGE4Q13068 117 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 GAGE5Q13069 117 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 GAGE13Q4V321 117 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 LYZL1Q6UWQ5 148 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 HIVEP3Q5T1R4 2406 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 KIF26AQ9ULI4 1882 aaPredicted RBP9.24□□□□□ -0.93
SYNE1-204ENST00000367248 MYO18BQ8IUG5 2567 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 SCGB1A1P11684 91 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 FOXL1Q12952 345 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 PGPEP1Q9NXJ5 209 aa9.24□□□□□ -0.93
SYNE1-204ENST00000367248 WNK1Q9H4A3 2382 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 C14orf178Q8N769 122 aaPredicted RBP9.23□□□□□ -0.93
SYNE1-204ENST00000367248 CCDC168Q8NDH2 2452 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 LINC00158P58513 81 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 ST6GALNAC6Q969X2 333 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 GNB1LQ9BYB4 327 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 A0A0J9YY99 117 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 A0A1B0GV72 72 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 TMEM158Q8WZ71 300 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 TRAV13-1A0A0B4J241 112 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 INAFM1C9JVW0 142 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 C19orf84I3L1E1 186 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 SH2D1AO60880 128 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 HOXB4P17483 251 aaPredicted RBP9.23□□□□□ -0.93
SYNE1-204ENST00000367248 Q86TA4 180 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 ADMP35318 185 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 Q6ZSR3 168 aa9.23□□□□□ -0.93
SYNE1-204ENST00000367248 DDTP30046 118 aa9.22□□□□□ -0.93
SYNE1-204ENST00000367248 KRTAP27-1Q3LI81 207 aa9.22□□□□□ -0.93
SYNE1-204ENST00000367248 FBXL19-AS1Q494R0 122 aa9.22□□□□□ -0.93
SYNE1-204ENST00000367248 ZNF815PA8K554 130 aa9.22□□□□□ -0.93
SYNE1-204ENST00000367248 BLCAPP62952 87 aa9.22□□□□□ -0.93
SYNE1-204ENST00000367248 C1orf194Q5T5A4 169 aa9.22□□□□□ -0.93
SYNE1-204ENST00000367248 MRPS16Q9Y3D3 137 aaKnown RBP9.22□□□□□ -0.93
SYNE1-204ENST00000367248 FABP2P12104 132 aa9.22□□□□□ -0.93
SYNE1-204ENST00000367248 C10orf105Q8TEF2 133 aa9.22□□□□□ -0.93
SYNE1-204ENST00000367248 ANAPC1Q9H1A4 1944 aa9.22□□□□□ -0.93
SYNE1-204ENST00000367248 NDUFA4O00483 81 aa9.22□□□□□ -0.93
SYNE1-204ENST00000367248 SLURP1P55000 103 aa9.22□□□□□ -0.93
SYNE1-204ENST00000367248 LHBP01229 141 aa9.21□□□□□ -0.93
SYNE1-204ENST00000367248 LINC00614P0C842 121 aa9.21□□□□□ -0.93
SYNE1-204ENST00000367248 MED13Q9UHV7 2174 aa9.21□□□□□ -0.93
SYNE1-204ENST00000367248 SFTA2Q6UW10 78 aa9.21□□□□□ -0.93
SYNE1-204ENST00000367248 WFDC11Q8NEX6 87 aa9.21□□□□□ -0.94
SYNE1-204ENST00000367248 LINC01549A6NIU2 74 aa9.21□□□□□ -0.94
SYNE1-204ENST00000367248 OR11H6Q8NGC7 330 aa9.21□□□□□ -0.94
SYNE1-204ENST00000367248 SPOCK3Q9BQ16 436 aa9.21□□□□□ -0.94
SYNE1-204ENST00000367248 PLXNA2O75051 1894 aa9.21□□□□□ -0.94
SYNE1-204ENST00000367248 EREGO14944 169 aa9.2□□□□□ -0.94
SYNE1-204ENST00000367248 HEATR5AQ86XA9 2040 aa9.2□□□□□ -0.94
SYNE1-204ENST00000367248 TRBV19A0A075B6N1 114 aa9.2□□□□□ -0.94
SYNE1-204ENST00000367248 APOMO95445 188 aa9.2□□□□□ -0.94
SYNE1-204ENST00000367248 OR5A1Q8NGJ0 315 aa9.2□□□□□ -0.94
SYNE1-204ENST00000367248 ABCA2Q9BZC7 2435 aa9.2□□□□□ -0.94
SYNE1-204ENST00000367248 TNCP24821 2201 aa9.2□□□□□ -0.94
SYNE1-204ENST00000367248 COL4A3Q01955 1670 aa9.2□□□□□ -0.94
SYNE1-204ENST00000367248 IGF2BP2-AS1Q96M15 143 aa9.2□□□□□ -0.94
SYNE1-204ENST00000367248 ESM1Q9NQ30 184 aa9.2□□□□□ -0.94
SYNE1-204ENST00000367248 LSM4Q9Y4Z0 139 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms