RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 KRTAP2-3P0C7H8 128 aa0.12□□□□□ -2.39
RNU6-428P-201ENST00000362942 HSD11B1P28845 292 aa0.12□□□□□ -2.39
RNU6-428P-201ENST00000362942 PPP1R2P41236 205 aa0.12□□□□□ -2.39
RNU6-428P-201ENST00000362942 GNG5P63218 68 aa0.12□□□□□ -2.39
RNU6-428P-201ENST00000362942 FOXI2Q6ZQN5 318 aa0.12□□□□□ -2.39
RNU6-428P-201ENST00000362942 FAM216BQ8N7L0 139 aa0.12□□□□□ -2.39
RNU6-428P-201ENST00000362942 PXT1Q8NFP0 134 aa0.12□□□□□ -2.39
RNU6-428P-201ENST00000362942 PLAC4Q8WY50 150 aa0.12□□□□□ -2.39
RNU6-428P-201ENST00000362942 CHMP6Q96FZ7 201 aa0.12□□□□□ -2.39
RNU6-428P-201ENST00000362942 MCEEQ96PE7 176 aa0.12□□□□□ -2.39
RNU6-428P-201ENST00000362942 CCL19Q99731 98 aa0.12□□□□□ -2.39
RNU6-428P-201ENST00000362942 KRTAP2-4Q9BYR9 128 aa0.12□□□□□ -2.39
RNU6-428P-201ENST00000362942 KRTAP2-1Q9BYU5 128 aa0.12□□□□□ -2.39
RNU6-428P-201ENST00000362942 FRAS1Q86XX4 4008 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 PRORSD1PA6NEY8 169 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 A6NN06 94 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 SULT1C4O75897 302 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 CST7O76096 145 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 IDO1P14902 403 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 PDE6GP18545 87 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 RPL35P42766 123 aaKnown RBP0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 CAV3P56539 151 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 RPL37AP61513 92 aaKnown RBP0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 MIR22HGQ0VDD5 57 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 DIAPH2-AS1Q14236 149 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 SPINK13Q1W4C9 94 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 VMA21Q3ZAQ7 101 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 C1orf140Q5VVS0 124 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 PRR15Q8IV56 129 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 NUP35Q8NFH5 326 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 OR13C6PQ8NH95 151 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 AP1S3Q96PC3 154 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 GPX7Q96SL4 187 aaPredicted RBP0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 PAIP2Q9BPZ3 127 aaKnown RBP0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 EFCAB11Q9BUY7 163 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 RTL8AQ9BWD3 113 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 OR2H1Q9GZK4 316 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 LAMTOR3Q9UHA4 124 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 TPRKBQ9Y3C4 175 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 ADGRL3Q9HAR2 1447 aa0.11□□□□□ -2.39
RNU6-428P-201ENST00000362942 K7ERJ3 54 aa0.1□□□□□ -2.39
RNU6-428P-201ENST00000362942 INSL3P51460 131 aa0.1□□□□□ -2.39
RNU6-428P-201ENST00000362942 ARF6P62330 175 aa0.1□□□□□ -2.39
RNU6-428P-201ENST00000362942 HBBP68871 147 aa0.1□□□□□ -2.39
RNU6-428P-201ENST00000362942 MRPS36P82909 103 aaKnown RBP0.1□□□□□ -2.39
RNU6-428P-201ENST00000362942 SNCBQ16143 134 aa0.1□□□□□ -2.39
RNU6-428P-201ENST00000362942 FKBP1CQ5VVH2 108 aa0.1□□□□□ -2.39
RNU6-428P-201ENST00000362942 C10orf99Q6UWK7 81 aa0.1□□□□□ -2.39
RNU6-428P-201ENST00000362942 DGCR14Q96DF8 476 aaKnown RBP0.1□□□□□ -2.39
RNU6-428P-201ENST00000362942 LPAR5Q9H1C0 372 aa0.1□□□□□ -2.39
RNU6-428P-201ENST00000362942 ADGBQ8N7X0 1667 aa0.1□□□□□ -2.39
RNU6-428P-201ENST00000362942 CD109Q6YHK3 1445 aa0.1□□□□□ -2.39
RNU6-428P-201ENST00000362942 ZNF462Q96JM2 2506 aa0.1□□□□□ -2.39
RNU6-428P-201ENST00000362942 ODAMA1E959 279 aa0.09□□□□□ -2.4
RNU6-428P-201ENST00000362942 PIAS1O75925 651 aa0.09□□□□□ -2.4
RNU6-428P-201ENST00000362942 IFNA1P01562 189 aa0.09□□□□□ -2.4
RNU6-428P-201ENST00000362942 IGHV3-30P01768 117 aa0.09□□□□□ -2.4
RNU6-428P-201ENST00000362942 IGHV3-30-5P0DP03 117 aa0.09□□□□□ -2.4
RNU6-428P-201ENST00000362942 SPTBP11277 2137 aa0.09□□□□□ -2.4
RNU6-428P-201ENST00000362942 DHRS4L2Q6PKH6 230 aa0.09□□□□□ -2.4
RNU6-428P-201ENST00000362942 CASC2Q6XLA1 102 aa0.09□□□□□ -2.4
RNU6-428P-201ENST00000362942 PHF5AQ7RTV0 110 aaKnown RBP0.09□□□□□ -2.4
RNU6-428P-201ENST00000362942 KIAA1107Q9UPP5 1409 aa0.09□□□□□ -2.4
RNU6-428P-201ENST00000362942 RTL9Q8NET4 1388 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 ASH1LQ9NR48 2969 aaKnown RBP0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 FRMPD1Q5SYB0 1578 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 NAV3Q8IVL0 2385 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 H3BQV1 296 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 MT-ND6P03923 174 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 CAPZBP47756 277 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 MSMO1Q15800 293 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 RTL8BQ17RB0 113 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 OR4B1Q8NGF8 309 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 OR4C12Q96R67 309 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 NABP2Q9BQ15 211 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 NAT8BQ9UHF3 227 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 STOML2Q9UJZ1 356 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 SSPOA2VEC9 5147 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 ATG2AQ2TAZ0 1938 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 MYH2Q9UKX2 1941 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 NAV2Q8IVL1 2488 aa0.08□□□□□ -2.4
RNU6-428P-201ENST00000362942 CACNA1EQ15878 2313 aa0.07□□□□□ -2.4
RNU6-428P-201ENST00000362942 C5orf58C9J3I9 102 aa0.07□□□□□ -2.4
RNU6-428P-201ENST00000362942 KPNA4O00629 521 aaPredicted RBP0.07□□□□□ -2.4
RNU6-428P-201ENST00000362942 RPS3P23396 243 aaKnown RBP eCLIP0.07□□□□□ -2.4
RNU6-428P-201ENST00000362942 RPL19P84098 196 aaKnown RBP0.07□□□□□ -2.4
RNU6-428P-201ENST00000362942 POU6F1Q14863 301 aa0.07□□□□□ -2.4
RNU6-428P-201ENST00000362942 NEDD8Q15843 81 aa0.07□□□□□ -2.4
RNU6-428P-201ENST00000362942 HACD4Q5VWC8 232 aa0.07□□□□□ -2.4
RNU6-428P-201ENST00000362942 XAF1Q6GPH4 301 aa0.07□□□□□ -2.4
RNU6-428P-201ENST00000362942 TMED4Q7Z7H5 227 aa0.07□□□□□ -2.4
RNU6-428P-201ENST00000362942 OR5AK2Q8NH90 309 aa0.07□□□□□ -2.4
RNU6-428P-201ENST00000362942 GINS3Q9BRX5 216 aa0.07□□□□□ -2.4
RNU6-428P-201ENST00000362942 LIMD2Q9BT23 127 aa0.07□□□□□ -2.4
RNU6-428P-201ENST00000362942 ASB4Q9Y574 426 aa0.07□□□□□ -2.4
RNU6-428P-201ENST00000362942 MAST4O15021 2626 aa0.06□□□□□ -2.4
RNU6-428P-201ENST00000362942 KIAA1549LQ6ZVL6 1849 aa0.06□□□□□ -2.4
RNU6-428P-201ENST00000362942 GYPBP06028 91 aa0.06□□□□□ -2.4
RNU6-428P-201ENST00000362942 FABP4P15090 132 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms