RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 LHBP01229 141 aa10.77□□□□□ -0.69
LDB3-202ENST00000361373 ZNF134P52741 427 aa10.77□□□□□ -0.69
LDB3-202ENST00000361373 PLEKHB2Q96CS7 222 aa10.77□□□□□ -0.69
LDB3-202ENST00000361373 SPOCK3Q9BQ16 436 aa10.77□□□□□ -0.69
LDB3-202ENST00000361373 MED13LQ71F56 2210 aa10.77□□□□□ -0.69
LDB3-202ENST00000361373 COLCA2A8K830 154 aa10.77□□□□□ -0.69
LDB3-202ENST00000361373 IL17RELQ6ZVW7 336 aa10.77□□□□□ -0.69
LDB3-202ENST00000361373 MMP23AO75900 390 aa10.77□□□□□ -0.69
LDB3-202ENST00000361373 FBXL19-AS1Q494R0 122 aa10.77□□□□□ -0.69
LDB3-202ENST00000361373 UBE2E2Q96LR5 201 aa10.77□□□□□ -0.69
LDB3-202ENST00000361373 VPREB3Q9UKI3 123 aa10.77□□□□□ -0.69
LDB3-202ENST00000361373 DOCK9Q9BZ29 2069 aa10.76□□□□□ -0.69
LDB3-202ENST00000361373 TEX43Q6ZNM6 134 aa10.76□□□□□ -0.69
LDB3-202ENST00000361373 MST1LQ2TV78 715 aa10.76□□□□□ -0.69
LDB3-202ENST00000361373 TMEM249Q2WGJ8 235 aa10.76□□□□□ -0.69
LDB3-202ENST00000361373 PFN1P07737 140 aaKnown RBP10.76□□□□□ -0.69
LDB3-202ENST00000361373 THAP8Q8NA92 274 aa10.76□□□□□ -0.69
LDB3-202ENST00000361373 LIME1Q9H400 295 aa10.76□□□□□ -0.69
LDB3-202ENST00000361373 TCTEX1D4Q5JR98 221 aa10.76□□□□□ -0.69
LDB3-202ENST00000361373 C5orf30Q96GV9 206 aa10.76□□□□□ -0.69
LDB3-202ENST00000361373 APOMO95445 188 aa10.75□□□□□ -0.69
LDB3-202ENST00000361373 GFI1BQ5VTD9 330 aa10.75□□□□□ -0.69
LDB3-202ENST00000361373 YLPM1P49750 1951 aaKnown RBP10.75□□□□□ -0.69
LDB3-202ENST00000361373 PTPRQQ9UMZ3 2332 aa10.75□□□□□ -0.69
LDB3-202ENST00000361373 ARMS2P0C7Q2 107 aa10.75□□□□□ -0.69
LDB3-202ENST00000361373 C14orf178Q8N769 122 aaPredicted RBP10.75□□□□□ -0.69
LDB3-202ENST00000361373 LTBP2Q14767 1821 aa10.75□□□□□ -0.69
LDB3-202ENST00000361373 H3BRN7 92 aa10.75□□□□□ -0.69
LDB3-202ENST00000361373 RASL10AQ92737 203 aa10.75□□□□□ -0.69
LDB3-202ENST00000361373 CTSZQ9UBR2 303 aa10.75□□□□□ -0.69
LDB3-202ENST00000361373 UBE2CO00762 179 aa10.75□□□□□ -0.69
LDB3-202ENST00000361373 IGFL4Q6B9Z1 124 aa10.75□□□□□ -0.69
LDB3-202ENST00000361373 NCR2O95944 276 aa10.74□□□□□ -0.69
LDB3-202ENST00000361373 CXCL1P09341 107 aa10.74□□□□□ -0.69
LDB3-202ENST00000361373 GRNP28799 593 aaKnown RBP10.74□□□□□ -0.69
LDB3-202ENST00000361373 CKS1BP61024 79 aa10.74□□□□□ -0.69
LDB3-202ENST00000361373 TRPT1Q86TN4 253 aaKnown RBP10.74□□□□□ -0.69
LDB3-202ENST00000361373 ZNF815PA8K554 130 aa10.74□□□□□ -0.69
LDB3-202ENST00000361373 APOC4P55056 127 aa10.74□□□□□ -0.69
LDB3-202ENST00000361373 TMEM238C9JI98 176 aa10.74□□□□□ -0.69
LDB3-202ENST00000361373 IGLC1P0CG04 106 aa10.74□□□□□ -0.69
LDB3-202ENST00000361373 HOXB4P17483 251 aaPredicted RBP10.74□□□□□ -0.69
LDB3-202ENST00000361373 C8orf86Q6ZUL3 223 aa10.74□□□□□ -0.69
LDB3-202ENST00000361373 SNAI2O43623 268 aa10.73□□□□□ -0.69
LDB3-202ENST00000361373 FXYD7P58549 80 aa10.73□□□□□ -0.69
LDB3-202ENST00000361373 CSTL1Q9H114 145 aa10.73□□□□□ -0.69
LDB3-202ENST00000361373 A0A1W2PNU3 283 aaPredicted RBP10.73□□□□□ -0.69
LDB3-202ENST00000361373 HIST1H2BLQ99880 126 aa10.73□□□□□ -0.69
LDB3-202ENST00000361373 SELENOKQ9Y6D0 94 aa10.73□□□□□ -0.69
LDB3-202ENST00000361373 IGKV3D-20A0A0C4DH25 116 aa10.73□□□□□ -0.69
LDB3-202ENST00000361373 ST6GALNAC6Q969X2 333 aa10.73□□□□□ -0.69
LDB3-202ENST00000361373 A0A1B0GUS0 222 aa10.73□□□□□ -0.69
LDB3-202ENST00000361373 A8MWV9 139 aa10.73□□□□□ -0.69
LDB3-202ENST00000361373 TDGF1P3P51864 188 aa10.73□□□□□ -0.69
LDB3-202ENST00000361373 ERCC8Q13216 396 aa10.73□□□□□ -0.69
LDB3-202ENST00000361373 HOXA3O43365 443 aaPredicted RBP10.72□□□□□ -0.69
LDB3-202ENST00000361373 ADORA2A-AS1P86434 159 aa10.72□□□□□ -0.69
LDB3-202ENST00000361373 IGHV7-4-1A0A0J9YVY3 117 aa10.72□□□□□ -0.69
LDB3-202ENST00000361373 OR2K2Q8NGT1 345 aa10.72□□□□□ -0.69
LDB3-202ENST00000361373 PLXND1Q9Y4D7 1925 aa10.72□□□□□ -0.69
LDB3-202ENST00000361373 CDKN1BP46527 198 aa10.72□□□□□ -0.69
LDB3-202ENST00000361373 IGHV1OR15-1A0A075B7D0 117 aa10.71□□□□□ -0.69
LDB3-202ENST00000361373 PRSS46E5RG02 174 aa10.71□□□□□ -0.69
LDB3-202ENST00000361373 NDUFS7O75251 213 aa10.71□□□□□ -0.69
LDB3-202ENST00000361373 DEFB112Q30KQ8 113 aa10.71□□□□□ -0.69
LDB3-202ENST00000361373 CD300EQ496F6 205 aaPredicted RBP10.71□□□□□ -0.69
LDB3-202ENST00000361373 FAM231DQ6ZW35 169 aa10.71□□□□□ -0.69
LDB3-202ENST00000361373 HIST3H2BBQ8N257 126 aa10.71□□□□□ -0.69
LDB3-202ENST00000361373 ATP6V0BQ99437 205 aa10.71□□□□□ -0.69
LDB3-202ENST00000361373 TPSG1Q9NRR2 321 aa10.71□□□□□ -0.69
LDB3-202ENST00000361373 LSM4Q9Y4Z0 139 aaKnown RBP10.71□□□□□ -0.69
LDB3-202ENST00000361373 IGHV3-73A0A0B4J1V6 119 aa10.71□□□□□ -0.69
LDB3-202ENST00000361373 CENPVL3A0A0U1RRI6 287 aa10.71□□□□□ -0.69
LDB3-202ENST00000361373 IGHV3-53P01767 116 aa10.71□□□□□ -0.69
LDB3-202ENST00000361373 C10orf105Q8TEF2 133 aa10.71□□□□□ -0.69
LDB3-202ENST00000361373 NDUFAF3Q9BU61 184 aa10.71□□□□□ -0.69
LDB3-202ENST00000361373 NOTCH2Q04721 2471 aa10.71□□□□□ -0.7
LDB3-202ENST00000361373 NDUFS6O75380 124 aaKnown RBP10.71□□□□□ -0.7
LDB3-202ENST00000361373 XCL2Q9UBD3 114 aa10.71□□□□□ -0.7
LDB3-202ENST00000361373 TSSC4Q9Y5U2 329 aaPredicted RBP10.71□□□□□ -0.7
LDB3-202ENST00000361373 CUL9Q8IWT3 2517 aa10.71□□□□□ -0.7
LDB3-202ENST00000361373 IGHV4-61A0A0C4DH41 118 aa10.71□□□□□ -0.7
LDB3-202ENST00000361373 SRSF2Q01130 221 aaKnown RBP10.71□□□□□ -0.7
LDB3-202ENST00000361373 HSD52Q0P140 79 aa10.71□□□□□ -0.7
LDB3-202ENST00000361373 DEFB130BP0DP73 79 aa10.7□□□□□ -0.7
LDB3-202ENST00000361373 DEFB130AP0DP74 79 aa10.7□□□□□ -0.7
LDB3-202ENST00000361373 CACNA1AO00555 2505 aa10.7□□□□□ -0.7
LDB3-202ENST00000361373 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.7□□□□□ -0.7
LDB3-202ENST00000361373 LINC00158P58513 81 aa10.7□□□□□ -0.7
LDB3-202ENST00000361373 LY6G5BQ8NDX9 201 aa10.7□□□□□ -0.7
LDB3-202ENST00000361373 PRR25Q96S07 402 aa10.7□□□□□ -0.7
LDB3-202ENST00000361373 DIAPH2-AS1Q14236 149 aa10.7□□□□□ -0.7
LDB3-202ENST00000361373 SS18Q15532 418 aa10.7□□□□□ -0.7
LDB3-202ENST00000361373 SPINK13Q1W4C9 94 aa10.7□□□□□ -0.7
LDB3-202ENST00000361373 LINC00479Q96M42 142 aa10.7□□□□□ -0.7
LDB3-202ENST00000361373 GSN-AS1Q9NRJ2 163 aa10.7□□□□□ -0.7
LDB3-202ENST00000361373 SPCS1Q9Y6A9 102 aa10.7□□□□□ -0.7
LDB3-202ENST00000361373 LOC102724200A0A096LPH7 203 aaPredicted RBP10.69□□□□□ -0.7
LDB3-202ENST00000361373 IGHV4-39P01824 125 aa10.69□□□□□ -0.7
LDB3-202ENST00000361373 DAD1P61803 113 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms