RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 NLRC5Q86WI3 1866 aa14.1□□□□□ -0.15
COL27A1-201ENST00000356083 ZNRF2Q8NHG8 242 aa14.09□□□□□ -0.15
COL27A1-201ENST00000356083 LRP5O75197 1615 aa14.09□□□□□ -0.15
COL27A1-201ENST00000356083 CRLF1O75462 422 aa14.09□□□□□ -0.15
COL27A1-201ENST00000356083 TSKUQ8WUA8 353 aa14.09□□□□□ -0.15
COL27A1-201ENST00000356083 TRACP01848 142 aa14.09□□□□□ -0.15
COL27A1-201ENST00000356083 ATG2AQ2TAZ0 1938 aa14.09□□□□□ -0.15
COL27A1-201ENST00000356083 BUB1B-PAK6H3BSN5 160 aa14.09□□□□□ -0.15
COL27A1-201ENST00000356083 TIMP3P35625 211 aa14.09□□□□□ -0.15
COL27A1-201ENST00000356083 Q6ZQT7 251 aa14.09□□□□□ -0.15
COL27A1-201ENST00000356083 COL18A1P39060 1754 aa14.09□□□□□ -0.15
COL27A1-201ENST00000356083 PINLYPA6NC86 204 aa14.08□□□□□ -0.15
COL27A1-201ENST00000356083 LINC01590Q5TEZ4 76 aa14.08□□□□□ -0.15
COL27A1-201ENST00000356083 C8orf31Q8N9H6 132 aa14.08□□□□□ -0.15
COL27A1-201ENST00000356083 LY6G5BQ8NDX9 201 aa14.08□□□□□ -0.15
COL27A1-201ENST00000356083 SPINK8P0C7L1 97 aa14.08□□□□□ -0.15
COL27A1-201ENST00000356083 SMIM10L1P0DMW3 83 aa14.08□□□□□ -0.15
COL27A1-201ENST00000356083 AMN1Q8IY45 258 aa14.08□□□□□ -0.15
COL27A1-201ENST00000356083 SMIM10Q96HG1 83 aa14.08□□□□□ -0.15
COL27A1-201ENST00000356083 A0A1W2PPI3 338 aa14.08□□□□□ -0.16
COL27A1-201ENST00000356083 COL8A2P25067 703 aa14.08□□□□□ -0.16
COL27A1-201ENST00000356083 NHLRC3Q5JS37 347 aa14.08□□□□□ -0.16
COL27A1-201ENST00000356083 TRBV5-3A0A0A0MS03 114 aa14.08□□□□□ -0.16
COL27A1-201ENST00000356083 C5orf64Q2M2E5 130 aa14.08□□□□□ -0.16
COL27A1-201ENST00000356083 CHAC1Q9BUX1 264 aa14.08□□□□□ -0.16
COL27A1-201ENST00000356083 GZMMP51124 257 aa14.08□□□□□ -0.16
COL27A1-201ENST00000356083 SPATA31B1PQ5VZV4 182 aa14.08□□□□□ -0.16
COL27A1-201ENST00000356083 LINC01619G3V211 115 aa14.07□□□□□ -0.16
COL27A1-201ENST00000356083 MINOS1Q5TGZ0 78 aa14.07□□□□□ -0.16
COL27A1-201ENST00000356083 TMEM243Q9BU79 118 aa14.07□□□□□ -0.16
COL27A1-201ENST00000356083 OSTCQ9NRP0 149 aa14.07□□□□□ -0.16
COL27A1-201ENST00000356083 MINOS1-NBL1R4GNA1 71 aa14.07□□□□□ -0.16
COL27A1-201ENST00000356083 ID3Q02535 119 aa14.07□□□□□ -0.16
COL27A1-201ENST00000356083 LINC00205P59089 165 aa14.07□□□□□ -0.16
COL27A1-201ENST00000356083 NABP1Q96AH0 204 aa14.07□□□□□ -0.16
COL27A1-201ENST00000356083 TMEM170AQ8WVE7 144 aa14.07□□□□□ -0.16
COL27A1-201ENST00000356083 CRYGCP07315 174 aa14.06□□□□□ -0.16
COL27A1-201ENST00000356083 RSPO3Q9BXY4 272 aaPredicted RBP14.06□□□□□ -0.16
COL27A1-201ENST00000356083 ZNF503Q96F45 646 aa14.06□□□□□ -0.16
COL27A1-201ENST00000356083 DAZ1Q9NQZ3 744 aaKnown RBP14.06□□□□□ -0.16
COL27A1-201ENST00000356083 RBM3P98179 157 aaKnown RBP14.06□□□□□ -0.16
COL27A1-201ENST00000356083 IFITM3Q01628 133 aa14.06□□□□□ -0.16
COL27A1-201ENST00000356083 LYPD2Q6UXB3 125 aa14.06□□□□□ -0.16
COL27A1-201ENST00000356083 FAM223BA6NKX1 122 aa14.06□□□□□ -0.16
COL27A1-201ENST00000356083 FAM223AQ8IWN6 122 aa14.06□□□□□ -0.16
COL27A1-201ENST00000356083 NUP35Q8NFH5 326 aa14.06□□□□□ -0.16
COL27A1-201ENST00000356083 MST1LQ2TV78 715 aa14.05□□□□□ -0.16
COL27A1-201ENST00000356083 FGFBP3Q8TAT2 258 aa14.05□□□□□ -0.16
COL27A1-201ENST00000356083 C18orf12Q96KH6 178 aa14.05□□□□□ -0.16
COL27A1-201ENST00000356083 CTHRC1Q96CG8 243 aa14.05□□□□□ -0.16
COL27A1-201ENST00000356083 TRAV3A0A0B4J244 114 aa14.05□□□□□ -0.16
COL27A1-201ENST00000356083 MSMBP08118 114 aa14.05□□□□□ -0.16
COL27A1-201ENST00000356083 ZNF883P0CG24 379 aa14.05□□□□□ -0.16
COL27A1-201ENST00000356083 ARMS2P0C7Q2 107 aa14.05□□□□□ -0.16
COL27A1-201ENST00000356083 TRAV9-1A0A075B6T8 112 aa14.04□□□□□ -0.16
COL27A1-201ENST00000356083 A0A1W2PR77 199 aa14.04□□□□□ -0.16
COL27A1-201ENST00000356083 SVIPQ8NHG7 77 aa14.04□□□□□ -0.16
COL27A1-201ENST00000356083 PCNX3Q9H6A9 2034 aa14.04□□□□□ -0.16
COL27A1-201ENST00000356083 TRBV6-7A0A0A0MS04 114 aa14.04□□□□□ -0.16
COL27A1-201ENST00000356083 TRPT1Q86TN4 253 aaKnown RBP14.04□□□□□ -0.16
COL27A1-201ENST00000356083 MPV17L2Q567V2 206 aa14.04□□□□□ -0.16
COL27A1-201ENST00000356083 LRCOL1A6NCL2 159 aa14.03□□□□□ -0.16
COL27A1-201ENST00000356083 ERVH48-1M5A8F1 160 aa14.03□□□□□ -0.16
COL27A1-201ENST00000356083 SLC25A48Q6ZT89 311 aaKnown RBP14.03□□□□□ -0.16
COL27A1-201ENST00000356083 RPP25LQ8N5L8 163 aaKnown RBP14.03□□□□□ -0.16
COL27A1-201ENST00000356083 TP53TG1Q9Y2A0 90 aa14.03□□□□□ -0.16
COL27A1-201ENST00000356083 RNASE2P10153 161 aaKnown RBP14.03□□□□□ -0.16
COL27A1-201ENST00000356083 ZNRD1Q9P1U0 126 aa14.03□□□□□ -0.16
COL27A1-201ENST00000356083 HLA-DRB4P13762 266 aa14.02□□□□□ -0.16
COL27A1-201ENST00000356083 HLA-DRB4X5D2U9 266 aa14.02□□□□□ -0.16
COL27A1-201ENST00000356083 A0A1B0GWJ7 208 aa14.02□□□□□ -0.16
COL27A1-201ENST00000356083 KIR3DS1Q14943 382 aa14.02□□□□□ -0.16
COL27A1-201ENST00000356083 LYZL4Q96KX0 146 aa14.02□□□□□ -0.16
COL27A1-201ENST00000356083 TMEM242Q9NWH2 141 aa14.02□□□□□ -0.16
COL27A1-201ENST00000356083 C9orf139Q6ZV77 190 aa14.02□□□□□ -0.17
COL27A1-201ENST00000356083 VSIRQ9H7M9 311 aa14.02□□□□□ -0.17
COL27A1-201ENST00000356083 STPG4Q8N801 248 aa14.02□□□□□ -0.17
COL27A1-201ENST00000356083 SRSF3P84103 164 aaKnown RBP14.02□□□□□ -0.17
COL27A1-201ENST00000356083 NOP10Q9NPE3 64 aaKnown RBP14.02□□□□□ -0.17
COL27A1-201ENST00000356083 C8orf49Q96NF6 230 aa14.01□□□□□ -0.17
COL27A1-201ENST00000356083 SIGLEC9Q9Y336 463 aa14.01□□□□□ -0.17
COL27A1-201ENST00000356083 COL11A2P13942 1736 aaPredicted RBP14□□□□□ -0.17
COL27A1-201ENST00000356083 CR1LQ2VPA4 569 aa14□□□□□ -0.17
COL27A1-201ENST00000356083 PAQR4Q8N4S7 273 aaPredicted RBP14□□□□□ -0.17
COL27A1-201ENST00000356083 ZC2HC1BQ5TFG8 222 aa14□□□□□ -0.17
COL27A1-201ENST00000356083 IFITM2Q01629 132 aa14□□□□□ -0.17
COL27A1-201ENST00000356083 CSRP1P21291 193 aaKnown RBP14□□□□□ -0.17
COL27A1-201ENST00000356083 MLANAQ16655 118 aa14□□□□□ -0.17
COL27A1-201ENST00000356083 ADAMTSL5Q6ZMM2 481 aa14□□□□□ -0.17
COL27A1-201ENST00000356083 SEM1Q6ZVN7 128 aa14□□□□□ -0.17
COL27A1-201ENST00000356083 IGLV10-54A0A075B6I4 117 aa14□□□□□ -0.17
COL27A1-201ENST00000356083 TRAV26-2A0A0B4J265 109 aa14□□□□□ -0.17
COL27A1-201ENST00000356083 SPATA25Q9BR10 227 aa14□□□□□ -0.17
COL27A1-201ENST00000356083 LINC01549A6NIU2 74 aa13.99□□□□□ -0.17
COL27A1-201ENST00000356083 SEC61GP60059 68 aa13.99□□□□□ -0.17
COL27A1-201ENST00000356083 SMPXQ9UHP9 88 aa13.99□□□□□ -0.17
COL27A1-201ENST00000356083 TMEM258P61165 79 aa13.99□□□□□ -0.17
COL27A1-201ENST00000356083 PRR30Q53SZ7 412 aaPredicted RBP13.99□□□□□ -0.17
COL27A1-201ENST00000356083 WFDC9Q8NEX5 89 aa13.99□□□□□ -0.17
COL27A1-201ENST00000356083 A0A087WWC5 75 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms