RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ZNF883P0CG24 379 aa10.68□□□□□ -0.7
COL2A1-201ENST00000337299 SRSF1Q07955 248 aaKnown RBP eCLIP10.68□□□□□ -0.7
COL2A1-201ENST00000337299 RNFT1Q5M7Z0 435 aa10.68□□□□□ -0.7
COL2A1-201ENST00000337299 FAM90A1Q86YD7 464 aa10.68□□□□□ -0.7
COL2A1-201ENST00000337299 SCGB1A1P11684 91 aa10.68□□□□□ -0.7
COL2A1-201ENST00000337299 PAX1P15863 534 aa10.68□□□□□ -0.7
COL2A1-201ENST00000337299 FAM120AOSQ5T036 256 aa10.68□□□□□ -0.7
COL2A1-201ENST00000337299 MRPL35Q9NZE8 188 aaKnown RBP10.68□□□□□ -0.7
COL2A1-201ENST00000337299 MRPL51Q4U2R6 128 aaKnown RBP10.67□□□□□ -0.7
COL2A1-201ENST00000337299 GDF5OSQ5U4N7 250 aa10.67□□□□□ -0.7
COL2A1-201ENST00000337299 KIR2DL4Q99706 377 aa10.67□□□□□ -0.7
COL2A1-201ENST00000337299 FAM104BQ5XKR9 115 aa10.67□□□□□ -0.7
COL2A1-201ENST00000337299 C8orf49Q96NF6 230 aa10.67□□□□□ -0.7
COL2A1-201ENST00000337299 TANC2Q9HCD6 1990 aa10.67□□□□□ -0.7
COL2A1-201ENST00000337299 PROK2Q9HC23 129 aa10.67□□□□□ -0.7
COL2A1-201ENST00000337299 NDUFS7O75251 213 aa10.67□□□□□ -0.7
COL2A1-201ENST00000337299 NPC2P61916 151 aa10.67□□□□□ -0.7
COL2A1-201ENST00000337299 LAGE3Q14657 143 aa10.67□□□□□ -0.7
COL2A1-201ENST00000337299 LINC01545Q5VT33 79 aa10.67□□□□□ -0.7
COL2A1-201ENST00000337299 WIPF2Q8TF74 440 aaPredicted RBP10.67□□□□□ -0.7
COL2A1-201ENST00000337299 CHD8Q9HCK8 2581 aa10.66□□□□□ -0.7
COL2A1-201ENST00000337299 EML5Q05BV3 1969 aa10.66□□□□□ -0.7
COL2A1-201ENST00000337299 PRR33A8MZF0 331 aa10.66□□□□□ -0.7
COL2A1-201ENST00000337299 C12orf74Q32Q52 190 aa10.66□□□□□ -0.7
COL2A1-201ENST00000337299 DUX4L9Q6RFH8 374 aaPredicted RBP10.66□□□□□ -0.7
COL2A1-201ENST00000337299 PPP1R27Q86WC6 154 aa10.66□□□□□ -0.7
COL2A1-201ENST00000337299 FXYD5Q96DB9 178 aa10.66□□□□□ -0.7
COL2A1-201ENST00000337299 TNFRSF6BO95407 300 aa10.66□□□□□ -0.7
COL2A1-201ENST00000337299 IGKV3-20P01619 116 aa10.66□□□□□ -0.7
COL2A1-201ENST00000337299 GLRXP35754 106 aa10.66□□□□□ -0.7
COL2A1-201ENST00000337299 Q0VFX4 171 aa10.66□□□□□ -0.7
COL2A1-201ENST00000337299 SMPXQ9UHP9 88 aa10.66□□□□□ -0.7
COL2A1-201ENST00000337299 C16orf97H3BN30 126 aa10.66□□□□□ -0.7
COL2A1-201ENST00000337299 CEND1Q8N111 149 aa10.66□□□□□ -0.7
COL2A1-201ENST00000337299 ADAMTS9Q9P2N4 1935 aa10.66□□□□□ -0.7
COL2A1-201ENST00000337299 A0A0U1RRA0 63 aa10.65□□□□□ -0.7
COL2A1-201ENST00000337299 ZNF562Q6V9R5 426 aa10.65□□□□□ -0.7
COL2A1-201ENST00000337299 GFRA4Q9GZZ7 299 aa10.65□□□□□ -0.7
COL2A1-201ENST00000337299 C21orf62Q9NYP8 219 aa10.65□□□□□ -0.7
COL2A1-201ENST00000337299 SONP18583 2426 aaKnown RBP10.65□□□□□ -0.7
COL2A1-201ENST00000337299 CCDC168Q8NDH2 2452 aa10.65□□□□□ -0.7
COL2A1-201ENST00000337299 SRRM4A7MD48 611 aaKnown RBP10.65□□□□□ -0.7
COL2A1-201ENST00000337299 GTSF1Q8WW33 167 aa10.65□□□□□ -0.7
COL2A1-201ENST00000337299 ERG28Q9UKR5 140 aa10.65□□□□□ -0.7
COL2A1-201ENST00000337299 LINC00312Q9Y6C7 94 aa10.65□□□□□ -0.7
COL2A1-201ENST00000337299 BPTFQ12830 3046 aa10.65□□□□□ -0.7
COL2A1-201ENST00000337299 TRBV25-1A0A075B6N4 114 aa10.65□□□□□ -0.7
COL2A1-201ENST00000337299 LTAP01374 205 aa10.65□□□□□ -0.7
COL2A1-201ENST00000337299 ANKHD1Q8IWZ3 2542 aaKnown RBP10.65□□□□□ -0.7
COL2A1-201ENST00000337299 C3orf56Q8N813 242 aa10.65□□□□□ -0.7
COL2A1-201ENST00000337299 OR10J6PQ8NGY7 276 aa10.65□□□□□ -0.7
COL2A1-201ENST00000337299 RAB1BQ9H0U4 201 aa10.65□□□□□ -0.7
COL2A1-201ENST00000337299 A0A1W2PPI3 338 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 EFNA4P52798 201 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 FAM27E3Q08E93 113 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 C9orf106Q8NAJ2 232 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 GLMPQ8WWB7 406 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 ZNF492Q9P255 531 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 HAX1O00165 279 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 WT1-ASQ06250 92 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 ZNF56Q15929 161 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 CT83Q5H943 113 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 PPDPFLQ8WWR9 84 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 C20orf78Q9BR46 151 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 TMEM75Q8N9X5 138 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 WNK1Q9H4A3 2382 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 IGKV1OR2-108A0A075B7D4 117 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 C22orf46C9J442 243 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 CCL21O00585 134 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 CDX4O14627 284 aaPredicted RBP10.64□□□□□ -0.71
COL2A1-201ENST00000337299 KLF12Q9Y4X4 402 aa10.64□□□□□ -0.71
COL2A1-201ENST00000337299 NAV3Q8IVL0 2385 aa10.63□□□□□ -0.71
COL2A1-201ENST00000337299 PRSS29PA6NIE9 313 aa10.63□□□□□ -0.71
COL2A1-201ENST00000337299 IGLL5B9A064 214 aa10.63□□□□□ -0.71
COL2A1-201ENST00000337299 TM4SF5O14894 197 aa10.63□□□□□ -0.71
COL2A1-201ENST00000337299 NEU4Q8WWR8 484 aaPredicted RBP10.63□□□□□ -0.71
COL2A1-201ENST00000337299 ABHD17AQ96GS6 310 aa10.63□□□□□ -0.71
COL2A1-201ENST00000337299 IGF2BP2-AS1Q96M15 143 aa10.63□□□□□ -0.71
COL2A1-201ENST00000337299 NUP210Q8TEM1 1887 aaPredicted RBP10.63□□□□□ -0.71
COL2A1-201ENST00000337299 SLC25A16P16260 332 aa10.63□□□□□ -0.71
COL2A1-201ENST00000337299 GAGE5Q13069 117 aa10.63□□□□□ -0.71
COL2A1-201ENST00000337299 GAGE6Q13070 117 aa10.63□□□□□ -0.71
COL2A1-201ENST00000337299 ASCL5Q7RTU5 278 aa10.63□□□□□ -0.71
COL2A1-201ENST00000337299 METTL26Q96S19 204 aa10.63□□□□□ -0.71
COL2A1-201ENST00000337299 TRGV9Q99603 122 aa10.63□□□□□ -0.71
COL2A1-201ENST00000337299 SPRR3Q9UBC9 169 aa10.63□□□□□ -0.71
COL2A1-201ENST00000337299 TRAV26-2A0A0B4J265 109 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 IGHV1-18A0A0C4DH31 117 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 HLA-DRB4P13762 266 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 TMEM167AQ8TBQ9 72 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 HLA-DRB4X5D2U9 266 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 IGKV3D-20A0A0C4DH25 116 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 FNDC10F2Z333 226 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 FAM106CPP0CH98 169 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 FAM106AQ4KMX7 169 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 KHDC1LQ5JSQ8 128 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 Q8N976 141 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 PTH2Q96A98 100 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 C17orf77Q96MU5 243 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 SPAG8Q99932 426 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms