RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 DYNAPQ8N1N2 210 aa11.64□□□□□ -0.55
CHFR-202ENST00000315585 SRSF2Q01130 221 aaKnown RBP11.63□□□□□ -0.55
CHFR-202ENST00000315585 UNQ5815/PRO19632Q6UWF5 114 aa11.63□□□□□ -0.55
CHFR-202ENST00000315585 S4R3C0 116 aa11.63□□□□□ -0.55
CHFR-202ENST00000315585 SYS1-DBNDD2H3BUS1 97 aa11.62□□□□□ -0.55
CHFR-202ENST00000315585 ARMS2P0C7Q2 107 aa11.62□□□□□ -0.55
CHFR-202ENST00000315585 EGR2P11161 476 aaPredicted RBP11.62□□□□□ -0.55
CHFR-202ENST00000315585 RELQ04864 619 aaPredicted RBP11.62□□□□□ -0.55
CHFR-202ENST00000315585 URB1-AS1Q96HZ7 61 aa11.62□□□□□ -0.55
CHFR-202ENST00000315585 ATP6V0BQ99437 205 aa11.62□□□□□ -0.55
CHFR-202ENST00000315585 AP5S1Q9NUS5 200 aa11.62□□□□□ -0.55
CHFR-202ENST00000315585 PRR25Q96S07 402 aa11.62□□□□□ -0.55
CHFR-202ENST00000315585 ST20Q9HBF5 79 aa11.62□□□□□ -0.55
CHFR-202ENST00000315585 RELNP78509 3460 aa11.62□□□□□ -0.55
CHFR-202ENST00000315585 HRNRQ86YZ3 2850 aaPredicted RBP11.62□□□□□ -0.55
CHFR-202ENST00000315585 ZNF785A8K8V0 405 aa11.61□□□□□ -0.55
CHFR-202ENST00000315585 CRIP1P50238 77 aa11.61□□□□□ -0.55
CHFR-202ENST00000315585 PAX8Q06710 450 aa11.61□□□□□ -0.55
CHFR-202ENST00000315585 LCN12Q6JVE5 192 aa11.61□□□□□ -0.55
CHFR-202ENST00000315585 FA2HQ7L5A8 372 aa11.61□□□□□ -0.55
CHFR-202ENST00000315585 PRSS3P2Q8NHM4 247 aa11.61□□□□□ -0.55
CHFR-202ENST00000315585 ZNF502Q8TBZ5 544 aa11.61□□□□□ -0.55
CHFR-202ENST00000315585 LAMTOR2Q9Y2Q5 125 aa11.61□□□□□ -0.55
CHFR-202ENST00000315585 IGSF10Q6WRI0 2623 aa11.61□□□□□ -0.55
CHFR-202ENST00000315585 GAGE1Q13065 139 aa11.61□□□□□ -0.55
CHFR-202ENST00000315585 C15orf32Q32M92 178 aa11.61□□□□□ -0.55
CHFR-202ENST00000315585 SLC50A1Q9BRV3 221 aa11.61□□□□□ -0.55
CHFR-202ENST00000315585 A0A087X0K7 114 aa11.6□□□□□ -0.55
CHFR-202ENST00000315585 TRBV7-1A0A0A6YYK4 115 aa11.6□□□□□ -0.55
CHFR-202ENST00000315585 IGHV4-61A0A0C4DH41 118 aa11.6□□□□□ -0.55
CHFR-202ENST00000315585 OR4C46A6NHA9 309 aa11.6□□□□□ -0.55
CHFR-202ENST00000315585 NPFFO15130 113 aa11.6□□□□□ -0.55
CHFR-202ENST00000315585 BATFQ16520 125 aa11.6□□□□□ -0.55
CHFR-202ENST00000315585 EEF1AKMT3Q96AZ1 226 aa11.6□□□□□ -0.55
CHFR-202ENST00000315585 TPPP3Q9BW30 176 aa11.6□□□□□ -0.55
CHFR-202ENST00000315585 ARHGAP32A7KAX9 2087 aa11.6□□□□□ -0.55
CHFR-202ENST00000315585 RBAKDNA6NC62 111 aa11.6□□□□□ -0.55
CHFR-202ENST00000315585 SH2D1AO60880 128 aa11.6□□□□□ -0.55
CHFR-202ENST00000315585 SAA4P35542 130 aa11.6□□□□□ -0.55
CHFR-202ENST00000315585 OR10AG1Q8NH19 301 aa11.6□□□□□ -0.55
CHFR-202ENST00000315585 ZNF25P17030 456 aaPredicted RBP11.59□□□□□ -0.55
CHFR-202ENST00000315585 TSPOP30536 169 aa11.59□□□□□ -0.55
CHFR-202ENST00000315585 RHOGP84095 191 aa11.59□□□□□ -0.55
CHFR-202ENST00000315585 FAM120AOSQ5T036 256 aa11.59□□□□□ -0.55
CHFR-202ENST00000315585 ATOH7Q8N100 152 aa11.59□□□□□ -0.55
CHFR-202ENST00000315585 C8orf49Q96NF6 230 aa11.59□□□□□ -0.55
CHFR-202ENST00000315585 CLEC5AQ9NY25 188 aa11.59□□□□□ -0.55
CHFR-202ENST00000315585 IGHV3-23P01764 117 aa11.59□□□□□ -0.55
CHFR-202ENST00000315585 SLC25A16P16260 332 aa11.59□□□□□ -0.55
CHFR-202ENST00000315585 ORMDL3Q8N138 153 aa11.59□□□□□ -0.55
CHFR-202ENST00000315585 USP24Q9UPU5 2620 aa11.58□□□□□ -0.56
CHFR-202ENST00000315585 SMG1Q96Q15 3661 aaKnown RBP11.58□□□□□ -0.56
CHFR-202ENST00000315585 CLEC3BP05452 202 aa11.58□□□□□ -0.56
CHFR-202ENST00000315585 GPR183P32249 361 aa11.58□□□□□ -0.56
CHFR-202ENST00000315585 ECSCRQ19T08 205 aa11.58□□□□□ -0.56
CHFR-202ENST00000315585 LYZL1Q6UWQ5 148 aa11.58□□□□□ -0.56
CHFR-202ENST00000315585 MS4A6AQ9H2W1 248 aa11.58□□□□□ -0.56
CHFR-202ENST00000315585 DOPEY1Q5JWR5 2465 aa11.58□□□□□ -0.56
CHFR-202ENST00000315585 CENPVL3A0A0U1RRI6 287 aa11.58□□□□□ -0.56
CHFR-202ENST00000315585 FABP5P3A8MUU1 101 aa11.58□□□□□ -0.56
CHFR-202ENST00000315585 FBLN7Q53RD9 439 aa11.58□□□□□ -0.56
CHFR-202ENST00000315585 FAM104BQ5XKR9 115 aa11.58□□□□□ -0.56
CHFR-202ENST00000315585 SPATA12Q7Z6I5 190 aa11.58□□□□□ -0.56
CHFR-202ENST00000315585 IGHV4-30-2A0A087WSY4 118 aa11.57□□□□□ -0.56
CHFR-202ENST00000315585 ATP6V0E1O15342 81 aa11.57□□□□□ -0.56
CHFR-202ENST00000315585 BUB3O43684 328 aa11.57□□□□□ -0.56
CHFR-202ENST00000315585 IGLL1P15814 213 aa11.57□□□□□ -0.56
CHFR-202ENST00000315585 BCL6BQ8N143 479 aaPredicted RBP11.57□□□□□ -0.56
CHFR-202ENST00000315585 FER1L6-AS1Q8NA97 138 aa11.57□□□□□ -0.56
CHFR-202ENST00000315585 HIF1ANQ9NWT6 349 aa11.57□□□□□ -0.56
CHFR-202ENST00000315585 IGKV2-40A0A087WW87 121 aaPredicted RBP11.57□□□□□ -0.56
CHFR-202ENST00000315585 IGKV2D-40P01614 121 aaPredicted RBP11.57□□□□□ -0.56
CHFR-202ENST00000315585 MRPL53Q96EL3 112 aaKnown RBP11.57□□□□□ -0.56
CHFR-202ENST00000315585 METTL26Q96S19 204 aa11.57□□□□□ -0.56
CHFR-202ENST00000315585 U3KQK5 164 aa11.57□□□□□ -0.56
CHFR-202ENST00000315585 M0QZ24 198 aa11.56□□□□□ -0.56
CHFR-202ENST00000315585 SRSF1Q07955 248 aaKnown RBP eCLIP11.56□□□□□ -0.56
CHFR-202ENST00000315585 ASCL2Q99929 193 aa11.56□□□□□ -0.56
CHFR-202ENST00000315585 SMAD5-AS1Q9Y6J3 95 aa11.56□□□□□ -0.56
CHFR-202ENST00000315585 LRBAP50851 2863 aa11.56□□□□□ -0.56
CHFR-202ENST00000315585 IGHV1-69DA0A0B4J2H0 117 aa11.56□□□□□ -0.56
CHFR-202ENST00000315585 B4DSR2 109 aa11.56□□□□□ -0.56
CHFR-202ENST00000315585 DLEU1O43261 78 aa11.56□□□□□ -0.56
CHFR-202ENST00000315585 IGHV1-69P01742 117 aa11.56□□□□□ -0.56
CHFR-202ENST00000315585 PPBPP02775 128 aa11.56□□□□□ -0.56
CHFR-202ENST00000315585 CSN3P07498 182 aa11.56□□□□□ -0.56
CHFR-202ENST00000315585 MSMBP08118 114 aa11.56□□□□□ -0.56
CHFR-202ENST00000315585 GATA3P23771 443 aa11.56□□□□□ -0.56
CHFR-202ENST00000315585 ZFAND3Q9H8U3 227 aa11.56□□□□□ -0.56
CHFR-202ENST00000315585 AJUBAQ96IF1 538 aa11.55□□□□□ -0.56
CHFR-202ENST00000315585 PRELID3AQ96N28 172 aa11.55□□□□□ -0.56
CHFR-202ENST00000315585 TMEM208Q9BTX3 173 aa11.55□□□□□ -0.56
CHFR-202ENST00000315585 A1L4Q6 167 aa11.55□□□□□ -0.56
CHFR-202ENST00000315585 FAM223BA6NKX1 122 aa11.55□□□□□ -0.56
CHFR-202ENST00000315585 G0S2P27469 103 aa11.55□□□□□ -0.56
CHFR-202ENST00000315585 ATP5G2Q06055 141 aa11.55□□□□□ -0.56
CHFR-202ENST00000315585 FAM223AQ8IWN6 122 aa11.55□□□□□ -0.56
CHFR-202ENST00000315585 MOB4Q9Y3A3 225 aa11.55□□□□□ -0.56
CHFR-202ENST00000315585 TWIST1Q15672 202 aa11.54□□□□□ -0.56
CHFR-202ENST00000315585 PIP4P2Q8N4L2 257 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms