RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 DKK4Q9UBT3 224 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 LTAP01374 205 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 UTF1Q5T230 341 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 RASL11BQ9BPW5 248 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 VKORC1Q9BQB6 163 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 ARFGEF3Q5TH69 2177 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 HBDP02042 147 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 GDF5OSQ5U4N7 250 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 NPIPB3Q92617 1050 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 TRBV6-6A0A0A6YYG2 114 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 A0A1B0GUT8 65 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 IGHV1-2P23083 117 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 SEC61GP60059 68 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 Q6AWC8 147 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 ATP5L2Q7Z4Y8 100 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 MDS2Q8NDY4 140 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 C8orf46Q8TAG6 207 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 KLF14Q8TD94 323 aaPredicted RBP8.44□□□□□ -1.06
MSRB3-201ENST00000308259 COQ2Q96H96 371 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 NDUFA3O95167 84 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 SRSF1Q07955 248 aaKnown RBP eCLIP8.44□□□□□ -1.06
MSRB3-201ENST00000308259 LINC00596Q86U02 117 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 DKK2Q9UBU2 259 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 IGHV3OR15-7A0A075B7D8 119 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 C15orf62A8K5M9 175 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 NPFFO15130 113 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 FAM106CPP0CH98 169 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 FAM106AQ4KMX7 169 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 CEND1Q8N111 149 aa8.44□□□□□ -1.06
MSRB3-201ENST00000308259 TMEM30CPA0ZSE6 113 aa8.43□□□□□ -1.06
MSRB3-201ENST00000308259 LINC01549A6NIU2 74 aa8.43□□□□□ -1.06
MSRB3-201ENST00000308259 GGTLC3B5MD39 225 aa8.43□□□□□ -1.06
MSRB3-201ENST00000308259 MOSP00540 346 aa8.43□□□□□ -1.06
MSRB3-201ENST00000308259 TRAV3A0A0B4J244 114 aa8.43□□□□□ -1.06
MSRB3-201ENST00000308259 ZNF146Q15072 292 aa8.43□□□□□ -1.06
MSRB3-201ENST00000308259 TWIST1Q15672 202 aa8.43□□□□□ -1.06
MSRB3-201ENST00000308259 RRN3P1Q2M238 152 aa8.43□□□□□ -1.06
MSRB3-201ENST00000308259 RPL39P5Q59GN2 51 aa8.43□□□□□ -1.06
MSRB3-201ENST00000308259 SSUH2Q9Y2M2 353 aa8.43□□□□□ -1.06
MSRB3-201ENST00000308259 C10orf113Q5VZT2 155 aa8.43□□□□□ -1.06
MSRB3-201ENST00000308259 KLK15Q9H2R5 256 aa8.43□□□□□ -1.06
MSRB3-201ENST00000308259 NXT2Q9NPJ8 142 aaKnown RBP8.43□□□□□ -1.06
MSRB3-201ENST00000308259 LOC107984640A0A0U1RRK4 108 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 IGHV4-39P01824 125 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 MYOD1P15172 320 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 LY6DQ14210 128 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 FAM201AQ5SY85 155 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 HRCT1Q6UXD1 115 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 RPRMLQ8N4K4 120 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 MRAPQ8TCY5 172 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 C11orf52Q96A22 123 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 TCF19Q9Y242 345 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 KALRNO60229 2985 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 Q8IYB0 196 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 PRADC1Q9BSG0 188 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 M0R3E3 92 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 LINC00694P0DN24 101 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 MYOZ3Q8TDC0 251 aa8.42□□□□□ -1.06
MSRB3-201ENST00000308259 TRBV25-1A0A075B6N4 114 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 PMS2P5A8MQ11 134 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 IGKCP01834 107 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 SPRNQ5BIV9 151 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 Q6ZT83 130 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 C11orf53Q8IXP5 236 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 D6R8Y8 96 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 BRI3O95415 125 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 TRACP01848 142 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 CIARTQ8N365 385 aaPredicted RBP8.41□□□□□ -1.06
MSRB3-201ENST00000308259 POLEQ07864 2286 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 TNCP24821 2201 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 PIEZO2Q9H5I5 2752 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 CD40P25942 277 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 TMEM101Q96IK0 257 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 TM2D2Q9BX73 214 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 SPRY4Q9C004 299 aa8.41□□□□□ -1.06
MSRB3-201ENST00000308259 CENPVL3A0A0U1RRI6 287 aa8.4□□□□□ -1.06
MSRB3-201ENST00000308259 FOXF2Q12947 444 aa8.4□□□□□ -1.06
MSRB3-201ENST00000308259 ZNRF1Q8ND25 227 aa8.4□□□□□ -1.06
MSRB3-201ENST00000308259 RNASE6Q93091 150 aaKnown RBP8.4□□□□□ -1.06
MSRB3-201ENST00000308259 IGHG3P01860 377 aa8.4□□□□□ -1.06
MSRB3-201ENST00000308259 NUP37Q8NFH4 326 aa8.4□□□□□ -1.06
MSRB3-201ENST00000308259 PKDREJQ9NTG1 2253 aa8.4□□□□□ -1.06
MSRB3-201ENST00000308259 CRXO43186 299 aaPredicted RBP8.4□□□□□ -1.07
MSRB3-201ENST00000308259 PROP1O75360 226 aa8.4□□□□□ -1.07
MSRB3-201ENST00000308259 DPM2O94777 84 aa8.4□□□□□ -1.07
MSRB3-201ENST00000308259 LEPP41159 167 aa8.4□□□□□ -1.07
MSRB3-201ENST00000308259 CD177Q8N6Q3 437 aa8.4□□□□□ -1.07
MSRB3-201ENST00000308259 PCNX1Q96RV3 2341 aa8.4□□□□□ -1.07
MSRB3-201ENST00000308259 VWC2LB2RUY7 222 aa8.39□□□□□ -1.07
MSRB3-201ENST00000308259 LGALS9BQ3B8N2 356 aa8.39□□□□□ -1.07
MSRB3-201ENST00000308259 LGALS9CQ6DKI2 356 aa8.39□□□□□ -1.07
MSRB3-201ENST00000308259 FAM19A5Q7Z5A7 132 aaPredicted RBP8.39□□□□□ -1.07
MSRB3-201ENST00000308259 TEN1Q86WV5 123 aa8.39□□□□□ -1.07
MSRB3-201ENST00000308259 ORMDL3Q8N138 153 aa8.39□□□□□ -1.07
MSRB3-201ENST00000308259 TNRC6BQ9UPQ9 1833 aaKnown RBP8.39□□□□□ -1.07
MSRB3-201ENST00000308259 TACC2O95359 2948 aa8.39□□□□□ -1.07
MSRB3-201ENST00000308259 E9PLD3 99 aa8.39□□□□□ -1.07
MSRB3-201ENST00000308259 SMKR1H3BMG3 65 aa8.39□□□□□ -1.07
MSRB3-201ENST00000308259 Q8TCH9 128 aa8.39□□□□□ -1.07
MSRB3-201ENST00000308259 CHCHD5Q9BSY4 110 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms