RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 ANAPC10Q9UM13 185 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 NCKAP5O14513 1909 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 COL4A6Q14031 1691 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 HGFACQ04756 655 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 TRBV7-1A0A0A6YYK4 115 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 CSRP3P50461 194 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 PAQR4Q8N4S7 273 aaPredicted RBP4.55□□□□□ -1.68
CPSF2-201ENST00000298875 SIP14410 1827 aa4.55□□□□□ -1.68
CPSF2-201ENST00000298875 RFNGQ9Y644 331 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 MRPS18CQ9Y3D5 142 aaKnown RBP4.54□□□□□ -1.68
CPSF2-201ENST00000298875 TRAV3A0A0B4J244 114 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 VCYO14598 125 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 C14orf178Q8N769 122 aaPredicted RBP4.54□□□□□ -1.68
CPSF2-201ENST00000298875 POLR3KQ9Y2Y1 108 aaPredicted RBP4.54□□□□□ -1.68
CPSF2-201ENST00000298875 IGHV1-3A0A0C4DH29 117 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 hADV29S1A0JD25 119 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 H0YJW9 148 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 RBM3P98179 157 aaKnown RBP4.54□□□□□ -1.68
CPSF2-201ENST00000298875 IL17RELQ6ZVW7 336 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 NABP1Q96AH0 204 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 IGHV2-5P01817 119 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 MCRIP2Q9BUT9 160 aaKnown RBP4.54□□□□□ -1.68
CPSF2-201ENST00000298875 MYLKQ15746 1914 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 IGHV1-46P01743 117 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 Q6ZVH6 145 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 CYTL1Q9NRR1 136 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 MDC1Q14676 2089 aaKnown RBP4.54□□□□□ -1.68
CPSF2-201ENST00000298875 IGKV1-27A0A075B6S5 117 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 PRIMA1Q86XR5 153 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 SCN10AQ9Y5Y9 1956 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 FAM231DQ6ZW35 169 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 FGFBP3Q8TAT2 258 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 RNASE6Q93091 150 aaKnown RBP4.54□□□□□ -1.68
CPSF2-201ENST00000298875 IGFL4Q6B9Z1 124 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 SLX1AQ9BQ83 275 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 IGKV1D-8A0A087WSZ0 117 aa4.54□□□□□ -1.68
CPSF2-201ENST00000298875 MRPS36P82909 103 aaKnown RBP4.54□□□□□ -1.68
CPSF2-201ENST00000298875 ABCA7Q8IZY2 2146 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 SUPT4H1P63272 117 aaKnown RBP4.53□□□□□ -1.68
CPSF2-201ENST00000298875 C10orf55Q5SWW7 151 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 LINC00477Q96M19 166 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 PRSS47A8MTI9 375 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 CFHR3Q02985 330 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 TP53TG1Q9Y2A0 90 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 PRSS57Q6UWY2 283 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 C3orf56Q8N813 242 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 IGHV1-8P0DP01 117 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 ID3Q02535 119 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 TRGV9Q99603 122 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 KLHL30-AS1Q8NEE0 82 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 CD177Q8N6Q3 437 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 KLF5Q13887 457 aaPredicted RBP4.53□□□□□ -1.68
CPSF2-201ENST00000298875 NDUFC1O43677 76 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 EGR2P11161 476 aaPredicted RBP4.53□□□□□ -1.68
CPSF2-201ENST00000298875 ZNF664Q8N3J9 261 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 TRBV6-6A0A0A6YYG2 114 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 HLA-DRB4P13762 266 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 UBE2E2Q96LR5 201 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 C8orf49Q96NF6 230 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 HLA-DRB4X5D2U9 266 aa4.53□□□□□ -1.68
CPSF2-201ENST00000298875 A0A1W2PR77 199 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 LGALS9BQ3B8N2 356 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 LGALS9CQ6DKI2 356 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 THAP8Q8NA92 274 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 BUB1B-PAK6H3BSN5 160 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 UQCRQO14949 82 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 LY6DQ14210 128 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 STPG4Q8N801 248 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 SRSF8Q9BRL6 282 aaKnown RBP4.52□□□□□ -1.69
CPSF2-201ENST00000298875 TRAV13-2A0A0B4J235 113 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 PINLYPA6NC86 204 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 SPSB3Q6PJ21 355 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 FAM223BA6NKX1 122 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 FAM223AQ8IWN6 122 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 TMEM75Q8N9X5 138 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 C15orf53Q8NAA6 179 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 FOXG1P55316 489 aaPredicted RBP4.52□□□□□ -1.69
CPSF2-201ENST00000298875 TRPT1Q86TN4 253 aaKnown RBP4.52□□□□□ -1.69
CPSF2-201ENST00000298875 DEFB125Q8N687 156 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 NKAPP1Q8N9T2 125 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 PRO1854Q9UHT4 67 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 ZNF561-AS1K7EIQ3 104 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 FOXF2Q12947 444 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 C9orf139Q6ZV77 190 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 ABCA4P78363 2273 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 TRAV25A0A0B4J276 109 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 YPEL3P61236 119 aaPredicted RBP4.52□□□□□ -1.69
CPSF2-201ENST00000298875 Q86TA4 180 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 LY6G5BQ8NDX9 201 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 I3L3M4 83 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 DKK1O94907 266 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 BVES-AS1Q5T3Y7 98 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 BRD3OSQ6XYD6 125 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 WDR83OSQ9Y284 106 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 NPYP01303 97 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 IGKV1-5P01602 117 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 NTF4P34130 210 aa4.52□□□□□ -1.69
CPSF2-201ENST00000298875 DEFB130BP0DP73 79 aa4.51□□□□□ -1.69
CPSF2-201ENST00000298875 DEFB130AP0DP74 79 aa4.51□□□□□ -1.69
CPSF2-201ENST00000298875 CRYBA4P53673 196 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms