RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SPANXN1Q5VSR9 72 aa12.61□□□□□ -0.39
SMAD6-201ENST00000288840 RNF182Q8N6D2 247 aa12.61□□□□□ -0.39
SMAD6-201ENST00000288840 WFDC12Q8WWY7 111 aa12.61□□□□□ -0.39
SMAD6-201ENST00000288840 FCN3O75636 299 aa12.6□□□□□ -0.39
SMAD6-201ENST00000288840 ANKRD39Q53RE8 183 aa12.6□□□□□ -0.39
SMAD6-201ENST00000288840 THAP8Q8NA92 274 aa12.6□□□□□ -0.39
SMAD6-201ENST00000288840 GLMPQ8WWB7 406 aa12.6□□□□□ -0.39
SMAD6-201ENST00000288840 FBLL1A6NHQ2 334 aaKnown RBP12.6□□□□□ -0.39
SMAD6-201ENST00000288840 G3V318 75 aa12.6□□□□□ -0.39
SMAD6-201ENST00000288840 C3orf36Q3SXR2 165 aa12.6□□□□□ -0.39
SMAD6-201ENST00000288840 BRD3OSQ6XYD6 125 aa12.6□□□□□ -0.39
SMAD6-201ENST00000288840 LINC00311Q8N616 119 aa12.6□□□□□ -0.39
SMAD6-201ENST00000288840 IFI27P40305 119 aaPredicted RBP12.6□□□□□ -0.39
SMAD6-201ENST00000288840 TNFRSF14Q92956 283 aa12.59□□□□□ -0.39
SMAD6-201ENST00000288840 C16orf92Q96LL3 132 aa12.59□□□□□ -0.39
SMAD6-201ENST00000288840 HTN1P15515 57 aa12.59□□□□□ -0.39
SMAD6-201ENST00000288840 SYS1-DBNDD2H3BUS1 97 aa12.59□□□□□ -0.39
SMAD6-201ENST00000288840 PF4V1P10720 104 aa12.59□□□□□ -0.39
SMAD6-201ENST00000288840 TRAV30A0A087WSZ9 112 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 K7ENP7 123 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 SRD5A1P18405 259 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 CACNG7P62955 275 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 TRBV19A0A075B6N1 114 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 GP9P14770 177 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 KLRB1Q12918 225 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 TMEM78Q5T7P6 136 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 FER1L6-AS1Q8NA97 138 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 SHANK2-AS3Q9BTD1 123 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 IGHV1-24A0A0C4DH33 117 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 C7orf71A4D174 169 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 SPRY2O43597 315 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 IGKV3-20P01619 116 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 DLX6P56179 175 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 PVRIGQ6DKI7 326 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 DSCAML1Q8TD84 2053 aa12.58□□□□□ -0.4
SMAD6-201ENST00000288840 TNRC6BQ9UPQ9 1833 aaKnown RBP12.58□□□□□ -0.4
SMAD6-201ENST00000288840 MGPP08493 103 aa12.57□□□□□ -0.4
SMAD6-201ENST00000288840 ATP5L2Q7Z4Y8 100 aa12.57□□□□□ -0.4
SMAD6-201ENST00000288840 ZNF491Q8N8L2 437 aa12.57□□□□□ -0.4
SMAD6-201ENST00000288840 MRPL27Q9P0M9 148 aaKnown RBP12.57□□□□□ -0.4
SMAD6-201ENST00000288840 PSG3Q16557 428 aa12.57□□□□□ -0.4
SMAD6-201ENST00000288840 KAAG1Q9UBP8 84 aa12.57□□□□□ -0.4
SMAD6-201ENST00000288840 SH2D1AO60880 128 aa12.57□□□□□ -0.4
SMAD6-201ENST00000288840 IGLV1-47P01700 117 aa12.57□□□□□ -0.4
SMAD6-201ENST00000288840 M0R381 172 aa12.56□□□□□ -0.4
SMAD6-201ENST00000288840 BMI1P35226 326 aa12.56□□□□□ -0.4
SMAD6-201ENST00000288840 FAM231DQ6ZW35 169 aa12.56□□□□□ -0.4
SMAD6-201ENST00000288840 ZFP30Q9Y2G7 519 aa12.56□□□□□ -0.4
SMAD6-201ENST00000288840 TEX22C9J3V5 150 aa12.56□□□□□ -0.4
SMAD6-201ENST00000288840 ORMDL3Q8N138 153 aa12.56□□□□□ -0.4
SMAD6-201ENST00000288840 SVIPQ8NHG7 77 aa12.56□□□□□ -0.4
SMAD6-201ENST00000288840 F5H697 171 aa12.56□□□□□ -0.4
SMAD6-201ENST00000288840 K7EIM0 57 aa12.56□□□□□ -0.4
SMAD6-201ENST00000288840 LRBAP50851 2863 aa12.55□□□□□ -0.4
SMAD6-201ENST00000288840 PSG9Q00887 426 aa12.55□□□□□ -0.4
SMAD6-201ENST00000288840 KHDC1LQ5JSQ8 128 aa12.55□□□□□ -0.4
SMAD6-201ENST00000288840 FAM71F2Q6NXP2 309 aa12.55□□□□□ -0.4
SMAD6-201ENST00000288840 BPESC1Q9GZL8 116 aa12.55□□□□□ -0.4
SMAD6-201ENST00000288840 VWC2LB2RUY7 222 aa12.55□□□□□ -0.4
SMAD6-201ENST00000288840 FAM120AOSQ5T036 256 aa12.55□□□□□ -0.4
SMAD6-201ENST00000288840 VGLL1Q99990 258 aa12.55□□□□□ -0.4
SMAD6-201ENST00000288840 FBLN7Q53RD9 439 aa12.55□□□□□ -0.4
SMAD6-201ENST00000288840 METTL26Q96S19 204 aa12.55□□□□□ -0.4
SMAD6-201ENST00000288840 NACAE9PAV3 2078 aa12.55□□□□□ -0.4
SMAD6-201ENST00000288840 I3L2K1 104 aa12.54□□□□□ -0.4
SMAD6-201ENST00000288840 TRGV3P03979 118 aa12.54□□□□□ -0.4
SMAD6-201ENST00000288840 ZNF414Q96IQ9 312 aa12.54□□□□□ -0.4
SMAD6-201ENST00000288840 LTAP01374 205 aa12.54□□□□□ -0.4
SMAD6-201ENST00000288840 CDSNQ15517 529 aa12.54□□□□□ -0.4
SMAD6-201ENST00000288840 RAI1Q7Z5J4 1906 aaPredicted RBP12.54□□□□□ -0.4
SMAD6-201ENST00000288840 LRRK2Q5S007 2527 aa12.53□□□□□ -0.4
SMAD6-201ENST00000288840 NAV2Q8IVL1 2488 aa12.53□□□□□ -0.4
SMAD6-201ENST00000288840 GCSHP23434 173 aa12.53□□□□□ -0.4
SMAD6-201ENST00000288840 LINC00574Q9H8X3 128 aa12.53□□□□□ -0.4
SMAD6-201ENST00000288840 PRTN3P24158 256 aa12.53□□□□□ -0.4
SMAD6-201ENST00000288840 SAA4P35542 130 aa12.53□□□□□ -0.4
SMAD6-201ENST00000288840 RASL11AQ6T310 242 aa12.53□□□□□ -0.4
SMAD6-201ENST00000288840 CITED1Q99966 193 aa12.53□□□□□ -0.4
SMAD6-201ENST00000288840 TMEM160Q9NX00 188 aa12.53□□□□□ -0.4
SMAD6-201ENST00000288840 SOX21Q9Y651 276 aaPredicted RBP12.53□□□□□ -0.4
SMAD6-201ENST00000288840 PSMB11A5LHX3 300 aa12.52□□□□□ -0.4
SMAD6-201ENST00000288840 MAP1LC3AQ9H492 121 aa12.52□□□□□ -0.4
SMAD6-201ENST00000288840 LCNL1Q6ZST4 164 aa12.52□□□□□ -0.41
SMAD6-201ENST00000288840 MSRB1Q9NZV6 116 aa12.52□□□□□ -0.41
SMAD6-201ENST00000288840 TRAV8-6A0A0B4J262 113 aa12.52□□□□□ -0.41
SMAD6-201ENST00000288840 ZNF562Q6V9R5 426 aa12.52□□□□□ -0.41
SMAD6-201ENST00000288840 C12orf54Q6X4T0 127 aa12.52□□□□□ -0.41
SMAD6-201ENST00000288840 COL12A1Q99715 3063 aa12.51□□□□□ -0.41
SMAD6-201ENST00000288840 ABCA2Q9BZC7 2435 aa12.51□□□□□ -0.41
SMAD6-201ENST00000288840 ATP6V0E1O15342 81 aa12.51□□□□□ -0.41
SMAD6-201ENST00000288840 NEU4Q8WWR8 484 aaPredicted RBP12.51□□□□□ -0.41
SMAD6-201ENST00000288840 TRAV40A0A0B4J280 105 aa12.51□□□□□ -0.41
SMAD6-201ENST00000288840 FABP5P3A8MUU1 101 aa12.51□□□□□ -0.41
SMAD6-201ENST00000288840 HIST1H1AQ02539 215 aaPredicted RBP12.51□□□□□ -0.41
SMAD6-201ENST00000288840 LDLRAD2Q5SZI1 272 aa12.51□□□□□ -0.41
SMAD6-201ENST00000288840 CHCHD1Q96BP2 118 aaKnown RBP12.51□□□□□ -0.41
SMAD6-201ENST00000288840 PAX1P15863 534 aa12.5□□□□□ -0.41
SMAD6-201ENST00000288840 LEPP41159 167 aa12.5□□□□□ -0.41
SMAD6-201ENST00000288840 ATP5G2Q06055 141 aa12.5□□□□□ -0.41
SMAD6-201ENST00000288840 PRSS57Q6UWY2 283 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms