RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 CHAC1Q9BUX1 264 aa11.84□□□□□ -0.51
XRCC1-201ENST00000262887 TRBV19A0A075B6N1 114 aa11.83□□□□□ -0.52
XRCC1-201ENST00000262887 CCL8P80075 99 aa11.83□□□□□ -0.52
XRCC1-201ENST00000262887 C18orf15Q96N68 181 aa11.83□□□□□ -0.52
XRCC1-201ENST00000262887 NGBQ9NPG2 151 aa11.83□□□□□ -0.52
XRCC1-201ENST00000262887 PHLDA1Q8WV24 401 aaPredicted RBP11.83□□□□□ -0.52
XRCC1-201ENST00000262887 RASL11BQ9BPW5 248 aa11.83□□□□□ -0.52
XRCC1-201ENST00000262887 IGKV2D-26A0A0A0MRZ7 120 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 F8W1H4 67 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 RBP4P02753 201 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 CCL11P51671 97 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 PSMG4Q5JS54 123 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 SHISA2Q6UWI4 295 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 C1orf210Q8IVY1 113 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 SCNM1Q9BWG6 230 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 SPTBN4Q9H254 2564 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 WI2-2373I1.2A0A1W2PRP0 233 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 CKS2P33552 79 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 WFDC2Q14508 124 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 C8orf49Q96NF6 230 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 TMEM133Q9H2Q1 129 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 NHP2Q9NX24 153 aaKnown RBP11.82□□□□□ -0.52
XRCC1-201ENST00000262887 NPYP01303 97 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 SIGLEC15Q6ZMC9 328 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 TMEM190Q8WZ59 177 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 TTTY13Q9BZ97 58 aa11.82□□□□□ -0.52
XRCC1-201ENST00000262887 SMKR1H3BMG3 65 aa11.81□□□□□ -0.52
XRCC1-201ENST00000262887 LINC00311Q8N616 119 aa11.81□□□□□ -0.52
XRCC1-201ENST00000262887 FCN3O75636 299 aa11.81□□□□□ -0.52
XRCC1-201ENST00000262887 CNTFRP26992 372 aa11.81□□□□□ -0.52
XRCC1-201ENST00000262887 ATP5G2Q06055 141 aa11.81□□□□□ -0.52
XRCC1-201ENST00000262887 ZNF474Q6S9Z5 364 aaPredicted RBP11.81□□□□□ -0.52
XRCC1-201ENST00000262887 FDCSPQ8NFU4 85 aa11.81□□□□□ -0.52
XRCC1-201ENST00000262887 ZNF418Q8TF45 676 aaPredicted RBP11.81□□□□□ -0.52
XRCC1-201ENST00000262887 ARRDC1-AS1Q9H2J1 176 aa11.81□□□□□ -0.52
XRCC1-201ENST00000262887 SS18L2Q9UHA2 77 aa11.81□□□□□ -0.52
XRCC1-201ENST00000262887 SVILO95425 2214 aa11.81□□□□□ -0.52
XRCC1-201ENST00000262887 A0A1W2PRD5 423 aa11.8□□□□□ -0.52
XRCC1-201ENST00000262887 A0A1W2PRF3 423 aa11.8□□□□□ -0.52
XRCC1-201ENST00000262887 A0A1W2PRM7 423 aa11.8□□□□□ -0.52
XRCC1-201ENST00000262887 M0R3E3 92 aa11.8□□□□□ -0.52
XRCC1-201ENST00000262887 SHISA9B4DS77 424 aa11.8□□□□□ -0.52
XRCC1-201ENST00000262887 E9PLD3 99 aa11.8□□□□□ -0.52
XRCC1-201ENST00000262887 ZNF883P0CG24 379 aa11.8□□□□□ -0.52
XRCC1-201ENST00000262887 SEM1Q6ZVN7 128 aa11.8□□□□□ -0.52
XRCC1-201ENST00000262887 CEND1Q8N111 149 aa11.8□□□□□ -0.52
XRCC1-201ENST00000262887 HHLA3Q9XRX5 114 aa11.8□□□□□ -0.52
XRCC1-201ENST00000262887 TRBV25-1A0A075B6N4 114 aa11.79□□□□□ -0.52
XRCC1-201ENST00000262887 GATA3P23771 443 aa11.79□□□□□ -0.52
XRCC1-201ENST00000262887 LYPD1Q8N2G4 141 aa11.79□□□□□ -0.52
XRCC1-201ENST00000262887 SHANK2-AS3Q9BTD1 123 aa11.79□□□□□ -0.52
XRCC1-201ENST00000262887 TM2D2Q9BX73 214 aa11.79□□□□□ -0.52
XRCC1-201ENST00000262887 ZMAT4Q9H898 229 aa11.79□□□□□ -0.52
XRCC1-201ENST00000262887 WT1P19544 449 aaPredicted RBP11.79□□□□□ -0.52
XRCC1-201ENST00000262887 ODF1Q14990 250 aa11.79□□□□□ -0.52
XRCC1-201ENST00000262887 ZNF562Q6V9R5 426 aa11.79□□□□□ -0.52
XRCC1-201ENST00000262887 SH2D6Q7Z4S9 175 aa11.79□□□□□ -0.52
XRCC1-201ENST00000262887 C8orf31Q8N9H6 132 aa11.79□□□□□ -0.52
XRCC1-201ENST00000262887 IGLL5B9A064 214 aa11.78□□□□□ -0.52
XRCC1-201ENST00000262887 ETDBQ3ZM63 59 aa11.78□□□□□ -0.52
XRCC1-201ENST00000262887 SIGLEC9Q9Y336 463 aa11.78□□□□□ -0.52
XRCC1-201ENST00000262887 H3BRN7 92 aa11.78□□□□□ -0.52
XRCC1-201ENST00000262887 SH2D1AO60880 128 aa11.78□□□□□ -0.52
XRCC1-201ENST00000262887 IGKV1-17P01599 117 aa11.78□□□□□ -0.52
XRCC1-201ENST00000262887 IGKCP01834 107 aa11.78□□□□□ -0.52
XRCC1-201ENST00000262887 TWIST1Q15672 202 aa11.78□□□□□ -0.52
XRCC1-201ENST00000262887 TRAV17A0A0B4J275 112 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 MBD3L4A6NDZ8 208 aaPredicted RBP11.77□□□□□ -0.53
XRCC1-201ENST00000262887 MBD3L3A6NE82 208 aaPredicted RBP11.77□□□□□ -0.53
XRCC1-201ENST00000262887 MBD3L5A6NJ08 208 aaPredicted RBP11.77□□□□□ -0.53
XRCC1-201ENST00000262887 TEX22C9J3V5 150 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 K7EM74 188 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 NDUFB3O43676 98 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 PRSS1P07477 247 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 MBD3L2Q8NHZ7 208 aaPredicted RBP11.77□□□□□ -0.53
XRCC1-201ENST00000262887 PLCE1Q9P212 2302 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 H3BMG7 143 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 I3L2K1 104 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 THBDP07204 575 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 EVI2AP22794 236 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 LEPP41159 167 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 C3orf36Q3SXR2 165 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 C8orf86Q6ZUL3 223 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 GTSCR1Q86UQ5 136 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 ARPC1AQ92747 370 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 RNF183Q96D59 192 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 MAP1LC3AQ9H492 121 aa11.77□□□□□ -0.53
XRCC1-201ENST00000262887 K7EMI3 77 aa11.76□□□□□ -0.53
XRCC1-201ENST00000262887 PPP1R27Q86WC6 154 aa11.76□□□□□ -0.53
XRCC1-201ENST00000262887 ERG28Q9UKR5 140 aa11.76□□□□□ -0.53
XRCC1-201ENST00000262887 VSTM5A8MXK1 200 aa11.76□□□□□ -0.53
XRCC1-201ENST00000262887 CRYGBP07316 175 aa11.76□□□□□ -0.53
XRCC1-201ENST00000262887 FCER1GP30273 86 aa11.76□□□□□ -0.53
XRCC1-201ENST00000262887 SRSF1Q07955 248 aaKnown RBP eCLIP11.76□□□□□ -0.53
XRCC1-201ENST00000262887 LYPD2Q6UXB3 125 aa11.76□□□□□ -0.53
XRCC1-201ENST00000262887 C1orf122Q6ZSJ8 110 aa11.76□□□□□ -0.53
XRCC1-201ENST00000262887 AAMDCQ9H7C9 122 aa11.76□□□□□ -0.53
XRCC1-201ENST00000262887 ABCA1O95477 2261 aa11.75□□□□□ -0.53
XRCC1-201ENST00000262887 RP1L1Q8IWN7 2480 aaPredicted RBP11.75□□□□□ -0.53
XRCC1-201ENST00000262887 TTC9CQ8N5M4 171 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms