RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 DKK2Q9UBU2 259 aa8.29□□□□□ -1.08
TRPM1-201ENST00000256552 CCDC179H3BU77 68 aa8.29□□□□□ -1.08
TRPM1-201ENST00000256552 ARRDC1-AS1Q9H2J1 176 aa8.29□□□□□ -1.08
TRPM1-201ENST00000256552 TP53TG3Q9ULZ0 132 aa8.29□□□□□ -1.08
TRPM1-201ENST00000256552 IGHG3P01860 377 aa8.29□□□□□ -1.08
TRPM1-201ENST00000256552 TRGV3P03979 118 aa8.29□□□□□ -1.08
TRPM1-201ENST00000256552 FAM104BQ5XKR9 115 aa8.29□□□□□ -1.08
TRPM1-201ENST00000256552 C21orf140B9A014 251 aa8.28□□□□□ -1.08
TRPM1-201ENST00000256552 FOXG1P55316 489 aaPredicted RBP8.28□□□□□ -1.08
TRPM1-201ENST00000256552 DEFB104AQ8WTQ1 72 aa8.28□□□□□ -1.08
TRPM1-201ENST00000256552 METRNQ9UJH8 293 aa8.28□□□□□ -1.08
TRPM1-201ENST00000256552 CCL3L1P16619 93 aa8.28□□□□□ -1.08
TRPM1-201ENST00000256552 TRAV13-1A0A0B4J241 112 aa8.28□□□□□ -1.08
TRPM1-201ENST00000256552 NTN5Q8WTR8 489 aaPredicted RBP8.28□□□□□ -1.08
TRPM1-201ENST00000256552 DPH3P1Q9H4G8 78 aa8.28□□□□□ -1.08
TRPM1-201ENST00000256552 VPREB3Q9UKI3 123 aa8.28□□□□□ -1.08
TRPM1-201ENST00000256552 HLA-DMBP28068 263 aa8.28□□□□□ -1.08
TRPM1-201ENST00000256552 Q6ZT83 130 aa8.28□□□□□ -1.08
TRPM1-201ENST00000256552 NEU4Q8WWR8 484 aaPredicted RBP8.28□□□□□ -1.08
TRPM1-201ENST00000256552 TRGV9Q99603 122 aa8.28□□□□□ -1.08
TRPM1-201ENST00000256552 LINC00312Q9Y6C7 94 aa8.28□□□□□ -1.08
TRPM1-201ENST00000256552 RNASE2P10153 161 aaKnown RBP8.28□□□□□ -1.08
TRPM1-201ENST00000256552 TRAV25A0A0B4J276 109 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 FRMD6-AS1P0C7T7 363 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 Q8TAT8 98 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 DSCR8Q96T75 97 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 CSDC2Q9Y534 153 aaKnown RBP8.27□□□□□ -1.09
TRPM1-201ENST00000256552 SLC25A16P16260 332 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 C1orf53Q5VUE5 145 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 TMEM141Q96I45 108 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 CARD19Q96LW7 228 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 DOCK9Q9BZ29 2069 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 SCN10AQ9Y5Y9 1956 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 FAM236AA0A1B0GUQ0 79 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 FAM236BA0A1B0GV22 79 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 TMEM167AQ8TBQ9 72 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 GTSF1Q8WW33 167 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 CHCHD5Q9BSY4 110 aa8.27□□□□□ -1.09
TRPM1-201ENST00000256552 MRPL51Q4U2R6 128 aaKnown RBP8.26□□□□□ -1.09
TRPM1-201ENST00000256552 FOXL2NBQ6ZUU3 175 aa8.26□□□□□ -1.09
TRPM1-201ENST00000256552 PRO1854Q9UHT4 67 aa8.26□□□□□ -1.09
TRPM1-201ENST00000256552 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.26□□□□□ -1.09
TRPM1-201ENST00000256552 EGR2P11161 476 aaPredicted RBP8.26□□□□□ -1.09
TRPM1-201ENST00000256552 IGHV1-2P23083 117 aa8.26□□□□□ -1.09
TRPM1-201ENST00000256552 PRIMA1Q86XR5 153 aa8.26□□□□□ -1.09
TRPM1-201ENST00000256552 PEMTQ9UBM1 199 aa8.26□□□□□ -1.09
TRPM1-201ENST00000256552 NDUFS7O75251 213 aa8.26□□□□□ -1.09
TRPM1-201ENST00000256552 FGF6P10767 208 aa8.26□□□□□ -1.09
TRPM1-201ENST00000256552 DOCK3Q8IZD9 2030 aa8.26□□□□□ -1.09
TRPM1-201ENST00000256552 C6orf226Q5I0X4 101 aa8.26□□□□□ -1.09
TRPM1-201ENST00000256552 CD177Q8N6Q3 437 aa8.26□□□□□ -1.09
TRPM1-201ENST00000256552 PRR7Q8TB68 274 aa8.26□□□□□ -1.09
TRPM1-201ENST00000256552 MRPL35Q9NZE8 188 aaKnown RBP8.26□□□□□ -1.09
TRPM1-201ENST00000256552 TPRP12270 2363 aaKnown RBP8.26□□□□□ -1.09
TRPM1-201ENST00000256552 MED12Q93074 2177 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 IGLV3-12A0A075B6K2 115 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 TRBV25-1A0A075B6N4 114 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 ATP5G1P05496 136 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 C1orf162Q8NEQ5 155 aaPredicted RBP8.25□□□□□ -1.09
TRPM1-201ENST00000256552 BRK1Q8WUW1 75 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 ITLN2Q8WWU7 325 aaPredicted RBP8.25□□□□□ -1.09
TRPM1-201ENST00000256552 A0A1W2PR77 199 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 NBL1P41271 181 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 SRSF2Q01130 221 aaKnown RBP8.25□□□□□ -1.09
TRPM1-201ENST00000256552 SMRP1Q8NCR6 262 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 TMEM133Q9H2Q1 129 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 ESPL1Q14674 2120 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 E9PLD3 99 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 K7EMI3 77 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 UQCRQO14949 82 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 IMMP1LQ96LU5 166 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 PHF3Q92576 2039 aaKnown RBP8.25□□□□□ -1.09
TRPM1-201ENST00000256552 TRGV4A0A0C4DH28 118 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 IGHG2P01859 326 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 LYPD6Q86Y78 171 aa8.25□□□□□ -1.09
TRPM1-201ENST00000256552 SVILO95425 2214 aa8.24□□□□□ -1.09
TRPM1-201ENST00000256552 PRSS46E5RG02 174 aa8.24□□□□□ -1.09
TRPM1-201ENST00000256552 ERCC8Q13216 396 aa8.24□□□□□ -1.09
TRPM1-201ENST00000256552 CENPVL3A0A0U1RRI6 287 aa8.24□□□□□ -1.09
TRPM1-201ENST00000256552 PRB3Q04118 309 aaPredicted RBP8.24□□□□□ -1.09
TRPM1-201ENST00000256552 ZNF876PQ49A33 203 aa8.24□□□□□ -1.09
TRPM1-201ENST00000256552 PLXND1Q9Y4D7 1925 aa8.24□□□□□ -1.09
TRPM1-201ENST00000256552 F6UB75 175 aa8.24□□□□□ -1.09
TRPM1-201ENST00000256552 HLA-DRB4P13762 266 aa8.24□□□□□ -1.09
TRPM1-201ENST00000256552 XGP55808 180 aa8.24□□□□□ -1.09
TRPM1-201ENST00000256552 RPL36AP83881 106 aaKnown RBP8.24□□□□□ -1.09
TRPM1-201ENST00000256552 RPL36ALQ969Q0 106 aaKnown RBP8.24□□□□□ -1.09
TRPM1-201ENST00000256552 C8orf49Q96NF6 230 aa8.24□□□□□ -1.09
TRPM1-201ENST00000256552 ARHGEF17Q96PE2 2063 aaPredicted RBP8.24□□□□□ -1.09
TRPM1-201ENST00000256552 HLA-DRB4X5D2U9 266 aa8.24□□□□□ -1.09
TRPM1-201ENST00000256552 GGNQ86UU5 652 aa8.24□□□□□ -1.09
TRPM1-201ENST00000256552 Q8N8P6 123 aa8.24□□□□□ -1.09
TRPM1-201ENST00000256552 TRAV13-2A0A0B4J235 113 aa8.23□□□□□ -1.09
TRPM1-201ENST00000256552 VWCEQ96DN2 955 aa8.23□□□□□ -1.09
TRPM1-201ENST00000256552 DPM3Q9P2X0 92 aa8.23□□□□□ -1.09
TRPM1-201ENST00000256552 PATE3B3GLJ2 98 aa8.23□□□□□ -1.09
TRPM1-201ENST00000256552 THBDP07204 575 aa8.23□□□□□ -1.09
TRPM1-201ENST00000256552 HERVK_113P63121 156 aa8.23□□□□□ -1.09
TRPM1-201ENST00000256552 Q8N976 141 aa8.23□□□□□ -1.09
TRPM1-201ENST00000256552 ZNF784Q8NCA9 323 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms