RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 ABCA2Q9BZC7 2435 aa13.52□□□□□ -0.25
ACTN4-201ENST00000252699 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.51□□□□□ -0.25
ACTN4-201ENST00000252699 HOXA3O43365 443 aaPredicted RBP13.51□□□□□ -0.25
ACTN4-201ENST00000252699 IGHV4-38-2P0DP08 117 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 GCSHP23434 173 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 Q71RC1 249 aaPredicted RBP13.51□□□□□ -0.25
ACTN4-201ENST00000252699 RITA1Q96K30 269 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 PRDM13Q9H4Q3 707 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 NAV3Q8IVL0 2385 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 TRAV8-6A0A0B4J262 113 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 RPL13AP40429 203 aaKnown RBP13.51□□□□□ -0.25
ACTN4-201ENST00000252699 C1orf194Q5T5A4 169 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 NIT1Q86X76 327 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 C5orf30Q96GV9 206 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 SPOCK3Q9BQ16 436 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 WNK1Q9H4A3 2382 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 NUP210LQ5VU65 1888 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 NCR2O95944 276 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 IGLV1-47P01700 117 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 FOSL1P15407 271 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 FXYD7P58549 80 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 GFI1BQ5VTD9 330 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 VPS25Q9BRG1 176 aa13.51□□□□□ -0.25
ACTN4-201ENST00000252699 ZFP36P26651 326 aaKnown RBP13.5□□□□□ -0.25
ACTN4-201ENST00000252699 SSBP2P81877 361 aaPredicted RBP13.5□□□□□ -0.25
ACTN4-201ENST00000252699 DYSFO75923 2080 aa13.5□□□□□ -0.25
ACTN4-201ENST00000252699 NDUFA4O00483 81 aa13.5□□□□□ -0.25
ACTN4-201ENST00000252699 DEFB131AP59861 70 aa13.5□□□□□ -0.25
ACTN4-201ENST00000252699 H3BRN7 92 aa13.5□□□□□ -0.25
ACTN4-201ENST00000252699 SUMO2P61956 95 aaKnown RBP13.5□□□□□ -0.25
ACTN4-201ENST00000252699 GTF2H5Q6ZYL4 71 aa13.5□□□□□ -0.25
ACTN4-201ENST00000252699 HBDP02042 147 aa13.5□□□□□ -0.25
ACTN4-201ENST00000252699 TMEM249Q2WGJ8 235 aa13.5□□□□□ -0.25
ACTN4-201ENST00000252699 RASL11AQ6T310 242 aa13.5□□□□□ -0.25
ACTN4-201ENST00000252699 C14orf144Q96I85 54 aa13.5□□□□□ -0.25
ACTN4-201ENST00000252699 HIST1H4GQ99525 98 aa13.5□□□□□ -0.25
ACTN4-201ENST00000252699 RNF114Q9Y508 228 aa13.5□□□□□ -0.25
ACTN4-201ENST00000252699 IGLV2-14P01704 120 aa13.49□□□□□ -0.25
ACTN4-201ENST00000252699 PLA2G5P39877 138 aa13.49□□□□□ -0.25
ACTN4-201ENST00000252699 ZNF491Q8N8L2 437 aa13.49□□□□□ -0.25
ACTN4-201ENST00000252699 HIST1H2BLQ99880 126 aa13.49□□□□□ -0.25
ACTN4-201ENST00000252699 PMCHL2Q9BQD1 86 aa13.49□□□□□ -0.25
ACTN4-201ENST00000252699 NCKAP5O14513 1909 aa13.49□□□□□ -0.25
ACTN4-201ENST00000252699 LBHQ53QV2 105 aaPredicted RBP13.49□□□□□ -0.25
ACTN4-201ENST00000252699 D6R8Y8 96 aa13.48□□□□□ -0.25
ACTN4-201ENST00000252699 CRXO43186 299 aaPredicted RBP13.48□□□□□ -0.25
ACTN4-201ENST00000252699 SRSF1Q07955 248 aaKnown RBP eCLIP13.48□□□□□ -0.252e-6■■□□□ 11.4
ACTN4-201ENST00000252699 VWC2Q2TAL6 325 aa13.48□□□□□ -0.25
ACTN4-201ENST00000252699 TMEM101Q96IK0 257 aa13.48□□□□□ -0.25
ACTN4-201ENST00000252699 LSM4Q9Y4Z0 139 aaKnown RBP13.48□□□□□ -0.25
ACTN4-201ENST00000252699 TMEM238LA0A1B0GVL6 79 aa13.48□□□□□ -0.25
ACTN4-201ENST00000252699 A6NJY4 79 aa13.48□□□□□ -0.25
ACTN4-201ENST00000252699 UBE2CO00762 179 aa13.48□□□□□ -0.25
ACTN4-201ENST00000252699 Q8N7P7 452 aa13.48□□□□□ -0.25
ACTN4-201ENST00000252699 TMEM14CQ9P0S9 112 aa13.48□□□□□ -0.25
ACTN4-201ENST00000252699 IGHV7-81A0A0B4J1V7 117 aa13.48□□□□□ -0.25
ACTN4-201ENST00000252699 SMIM12Q96EX1 92 aa13.48□□□□□ -0.25
ACTN4-201ENST00000252699 VPREB3Q9UKI3 123 aa13.48□□□□□ -0.25
ACTN4-201ENST00000252699 CHD3Q12873 2000 aaKnown RBP13.47□□□□□ -0.25
ACTN4-201ENST00000252699 LINC01619G3V211 115 aa13.47□□□□□ -0.25
ACTN4-201ENST00000252699 DNLZQ5SXM8 178 aa13.47□□□□□ -0.25
ACTN4-201ENST00000252699 Q6ZPA2 131 aa13.47□□□□□ -0.25
ACTN4-201ENST00000252699 C8orf86Q6ZUL3 223 aa13.47□□□□□ -0.25
ACTN4-201ENST00000252699 ODF3L1Q8IXM7 274 aa13.47□□□□□ -0.25
ACTN4-201ENST00000252699 HIST3H2BBQ8N257 126 aa13.47□□□□□ -0.25
ACTN4-201ENST00000252699 RPL35AP18077 110 aaKnown RBP13.47□□□□□ -0.25
ACTN4-201ENST00000252699 TMEM75Q8N9X5 138 aa13.47□□□□□ -0.25
ACTN4-201ENST00000252699 RCHY1Q96PM5 261 aa13.47□□□□□ -0.25
ACTN4-201ENST00000252699 TRGV4A0A0C4DH28 118 aa13.47□□□□□ -0.25
ACTN4-201ENST00000252699 FXYD5Q96DB9 178 aa13.47□□□□□ -0.25
ACTN4-201ENST00000252699 C19orf84I3L1E1 186 aa13.46□□□□□ -0.25
ACTN4-201ENST00000252699 ELANEP08246 267 aa13.46□□□□□ -0.25
ACTN4-201ENST00000252699 NPBQ8NG41 125 aa13.46□□□□□ -0.25
ACTN4-201ENST00000252699 ST6GALNAC6Q969X2 333 aa13.46□□□□□ -0.25
ACTN4-201ENST00000252699 UBE2E2Q96LR5 201 aa13.46□□□□□ -0.25
ACTN4-201ENST00000252699 TMEM256Q8N2U0 113 aa13.46□□□□□ -0.26
ACTN4-201ENST00000252699 CHCHD1Q96BP2 118 aaKnown RBP13.46□□□□□ -0.26
ACTN4-201ENST00000252699 CYSLTR1Q9Y271 337 aa13.46□□□□□ -0.26
ACTN4-201ENST00000252699 PFN1P07737 140 aaKnown RBP13.45□□□□□ -0.26
ACTN4-201ENST00000252699 TCTEX1D4Q5JR98 221 aa13.45□□□□□ -0.26
ACTN4-201ENST00000252699 RAB37Q96AX2 223 aa13.45□□□□□ -0.26
ACTN4-201ENST00000252699 TNRC6AQ8NDV7 1962 aaKnown RBP13.45□□□□□ -0.26
ACTN4-201ENST00000252699 SNAI2O43623 268 aa13.45□□□□□ -0.26
ACTN4-201ENST00000252699 AMBPP02760 352 aa13.45□□□□□ -0.26
ACTN4-201ENST00000252699 ORMDL2Q53FV1 153 aa13.45□□□□□ -0.26
ACTN4-201ENST00000252699 DSCAMO60469 2012 aa13.45□□□□□ -0.26
ACTN4-201ENST00000252699 CGB3P0DN86 165 aa13.45□□□□□ -0.26
ACTN4-201ENST00000252699 CGB7P0DN87 165 aa13.45□□□□□ -0.26
ACTN4-201ENST00000252699 BLCAPP62952 87 aa13.45□□□□□ -0.26
ACTN4-201ENST00000252699 ZNF492Q9P255 531 aa13.44□□□□□ -0.26
ACTN4-201ENST00000252699 CIRBPQ14011 172 aaKnown RBP13.44□□□□□ -0.26
ACTN4-201ENST00000252699 MEIG1Q5JSS6 88 aa13.44□□□□□ -0.26
ACTN4-201ENST00000252699 C14orf178Q8N769 122 aaPredicted RBP13.44□□□□□ -0.26
ACTN4-201ENST00000252699 ZNF114Q8NC26 417 aa13.44□□□□□ -0.26
ACTN4-201ENST00000252699 C2orf88Q9BSF0 95 aa13.44□□□□□ -0.26
ACTN4-201ENST00000252699 H7C2G1 150 aa13.44□□□□□ -0.26
ACTN4-201ENST00000252699 ARMS2P0C7Q2 107 aa13.44□□□□□ -0.26
ACTN4-201ENST00000252699 CTAG1AP78358 180 aa13.44□□□□□ -0.26
ACTN4-201ENST00000252699 IFI27P40305 119 aaPredicted RBP13.44□□□□□ -0.26
ACTN4-201ENST00000252699 RPL24P83731 157 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms