RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 MRPS17Q9Y2R5 130 aaKnown RBP14.58□□□□□ -0.08
PTPN12-201ENST00000248594 SIT1Q9Y3P8 196 aa14.57□□□□□ -0.08
PTPN12-201ENST00000248594 C1orf210Q8IVY1 113 aa14.57□□□□□ -0.08
PTPN12-201ENST00000248594 DEFB104AQ8WTQ1 72 aa14.57□□□□□ -0.08
PTPN12-201ENST00000248594 ZNF714Q96N38 554 aa14.57□□□□□ -0.08
PTPN12-201ENST00000248594 C1QTNF4Q9BXJ3 329 aa14.57□□□□□ -0.08
PTPN12-201ENST00000248594 IGKV3D-15A0A087WSY6 115 aa14.56□□□□□ -0.08
PTPN12-201ENST00000248594 C5orf64Q2M2E5 130 aa14.56□□□□□ -0.08
PTPN12-201ENST00000248594 TEX29Q8N6K0 151 aa14.56□□□□□ -0.08
PTPN12-201ENST00000248594 CCL13Q99616 98 aa14.56□□□□□ -0.08
PTPN12-201ENST00000248594 CDIP1Q9H305 208 aa14.56□□□□□ -0.08
PTPN12-201ENST00000248594 MSRB1Q9NZV6 116 aa14.56□□□□□ -0.08
PTPN12-201ENST00000248594 IQCF6A8MYZ5 107 aa14.56□□□□□ -0.08
PTPN12-201ENST00000248594 NFE4Q86UQ8 179 aa14.56□□□□□ -0.08
PTPN12-201ENST00000248594 FAM90A1Q86YD7 464 aa14.56□□□□□ -0.08
PTPN12-201ENST00000248594 GAGE5Q13069 117 aa14.55□□□□□ -0.08
PTPN12-201ENST00000248594 GAGE6Q13070 117 aa14.55□□□□□ -0.08
PTPN12-201ENST00000248594 PHLDA1Q8WV24 401 aaPredicted RBP14.55□□□□□ -0.08
PTPN12-201ENST00000248594 ZNF492Q9P255 531 aa14.55□□□□□ -0.08
PTPN12-201ENST00000248594 KLRC4-KLRK1H3BQV0 150 aa14.55□□□□□ -0.08
PTPN12-201ENST00000248594 FHL3Q13643 280 aa14.55□□□□□ -0.08
PTPN12-201ENST00000248594 LRBAP50851 2863 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 IL4P05112 153 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 SCGB1C2P0DMR2 95 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 PF4V1P10720 104 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 CT83Q5H943 113 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 TTTY12Q9BZ98 90 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 GFRA4Q9GZZ7 299 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 TPSG1Q9NRR2 321 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 IGKV1D-37A0A075B6S9 117 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 H7C2G1 150 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 SUB1P53999 127 aaKnown RBP eCLIP14.54□□□□□ -0.08
PTPN12-201ENST00000248594 RRN3P1Q2M238 152 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 ZFP2Q6ZN57 461 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 DUSP23Q9BVJ7 150 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 MRPL35Q9NZE8 188 aaKnown RBP14.54□□□□□ -0.08
PTPN12-201ENST00000248594 CEP192Q8TEP8 1941 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 DIAPH2-AS1Q14236 149 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 KLF17Q5JT82 389 aaPredicted RBP14.54□□□□□ -0.08
PTPN12-201ENST00000248594 ZNF562Q6V9R5 426 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 FAM216BQ8N7L0 139 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 TMEM75Q8N9X5 138 aa14.54□□□□□ -0.08
PTPN12-201ENST00000248594 LINC01549A6NIU2 74 aa14.53□□□□□ -0.08
PTPN12-201ENST00000248594 SRSF9Q13242 221 aaKnown RBP eCLIP14.53□□□□□ -0.081e-6■■■□□ 18.8
PTPN12-201ENST00000248594 ZFAND6Q6FIF0 208 aa14.53□□□□□ -0.08
PTPN12-201ENST00000248594 RPEQ96AT9 228 aa14.53□□□□□ -0.08
PTPN12-201ENST00000248594 FAM104BQ5XKR9 115 aa14.53□□□□□ -0.08
PTPN12-201ENST00000248594 SCGB1D4Q6XE38 83 aa14.53□□□□□ -0.08
PTPN12-201ENST00000248594 TMEM158Q8WZ71 300 aa14.53□□□□□ -0.08
PTPN12-201ENST00000248594 KLF12Q9Y4X4 402 aa14.53□□□□□ -0.08
PTPN12-201ENST00000248594 ERG28Q9UKR5 140 aa14.53□□□□□ -0.08
PTPN12-201ENST00000248594 TRBV7-9A0A0J9YWB2 115 aa14.52□□□□□ -0.08
PTPN12-201ENST00000248594 IGFL4Q6B9Z1 124 aa14.52□□□□□ -0.08
PTPN12-201ENST00000248594 HIGD1AQ9Y241 93 aa14.52□□□□□ -0.08
PTPN12-201ENST00000248594 DPM2O94777 84 aa14.52□□□□□ -0.09
PTPN12-201ENST00000248594 ORM1P02763 201 aa14.52□□□□□ -0.09
PTPN12-201ENST00000248594 DPF1Q92782 380 aa14.52□□□□□ -0.09
PTPN12-201ENST00000248594 ZZEF1O43149 2961 aa14.52□□□□□ -0.09
PTPN12-201ENST00000248594 CEP295Q9C0D2 2601 aa14.52□□□□□ -0.09
PTPN12-201ENST00000248594 C10orf142B7Z368 130 aa14.51□□□□□ -0.09
PTPN12-201ENST00000248594 MYCNOSP40205 109 aa14.51□□□□□ -0.09
PTPN12-201ENST00000248594 Q8TAT8 98 aa14.51□□□□□ -0.09
PTPN12-201ENST00000248594 LINC00312Q9Y6C7 94 aa14.51□□□□□ -0.09
PTPN12-201ENST00000248594 HOXA3O43365 443 aaPredicted RBP14.51□□□□□ -0.09
PTPN12-201ENST00000248594 IGHV1-2P23083 117 aa14.51□□□□□ -0.09
PTPN12-201ENST00000248594 C17orf58Q2M2W7 97 aa14.51□□□□□ -0.09
PTPN12-201ENST00000248594 APC2O95996 2303 aa14.51□□□□□ -0.09
PTPN12-201ENST00000248594 K7ESF4 209 aa14.51□□□□□ -0.09
PTPN12-201ENST00000248594 ZNF502Q8TBZ5 544 aa14.51□□□□□ -0.09
PTPN12-201ENST00000248594 MAP1LC3AQ9H492 121 aa14.51□□□□□ -0.09
PTPN12-201ENST00000248594 HLA-DRB4P13762 266 aa14.5□□□□□ -0.09
PTPN12-201ENST00000248594 ID1P41134 155 aa14.5□□□□□ -0.09
PTPN12-201ENST00000248594 HLA-DRB4X5D2U9 266 aa14.5□□□□□ -0.09
PTPN12-201ENST00000248594 WI2-2373I1.2A0A1W2PRP0 233 aa14.5□□□□□ -0.09
PTPN12-201ENST00000248594 BRI3O95415 125 aa14.5□□□□□ -0.09
PTPN12-201ENST00000248594 OR10X1Q8NGY0 326 aa14.5□□□□□ -0.09
PTPN12-201ENST00000248594 IGHV3OR16-8A0A075B7F1 116 aa14.5□□□□□ -0.09
PTPN12-201ENST00000248594 CCL3L1P16619 93 aa14.5□□□□□ -0.09
PTPN12-201ENST00000248594 PRR7Q8TB68 274 aa14.5□□□□□ -0.09
PTPN12-201ENST00000248594 TM2D2Q9BX73 214 aa14.5□□□□□ -0.09
PTPN12-201ENST00000248594 CRIP1P50238 77 aa14.49□□□□□ -0.09
PTPN12-201ENST00000248594 TMEM164Q5U3C3 297 aa14.49□□□□□ -0.09
PTPN12-201ENST00000248594 CUBNO60494 3623 aa14.49□□□□□ -0.09
PTPN12-201ENST00000248594 NCBP2LA6PVI3 153 aaKnown RBP14.49□□□□□ -0.09
PTPN12-201ENST00000248594 CCDC179H3BU77 68 aa14.49□□□□□ -0.09
PTPN12-201ENST00000248594 TSPAN13O95857 204 aa14.49□□□□□ -0.09
PTPN12-201ENST00000248594 EFNA4P52798 201 aa14.49□□□□□ -0.09
PTPN12-201ENST00000248594 NDUFA4L2Q9NRX3 87 aa14.49□□□□□ -0.09
PTPN12-201ENST00000248594 ARL3P36405 182 aa14.48□□□□□ -0.09
PTPN12-201ENST00000248594 DLX1P56177 255 aa14.48□□□□□ -0.09
PTPN12-201ENST00000248594 TMEM133Q9H2Q1 129 aa14.48□□□□□ -0.09
PTPN12-201ENST00000248594 HHLA3Q9XRX5 114 aa14.48□□□□□ -0.09
PTPN12-201ENST00000248594 DSCAMO60469 2012 aa14.48□□□□□ -0.09
PTPN12-201ENST00000248594 KLRD1Q13241 179 aa14.48□□□□□ -0.09
PTPN12-201ENST00000248594 TRAV8-2A0A0B4J237 113 aa14.48□□□□□ -0.09
PTPN12-201ENST00000248594 GP9P14770 177 aa14.48□□□□□ -0.09
PTPN12-201ENST00000248594 TTC32Q5I0X7 151 aa14.48□□□□□ -0.09
PTPN12-201ENST00000248594 IGKV2-40A0A087WW87 121 aaPredicted RBP14.47□□□□□ -0.09
PTPN12-201ENST00000248594 IGKV2D-40P01614 121 aaPredicted RBP14.47□□□□□ -0.09
PTPN12-201ENST00000248594 DLX4Q92988 240 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms