RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 CUL9Q8IWT3 2517 aa10.99□□□□□ -0.65
SCNN1A-201ENST00000228916 TMSB15BA0A087X1C1 80 aa10.99□□□□□ -0.65
SCNN1A-201ENST00000228916 IGHV1-3A0A0C4DH29 117 aa10.99□□□□□ -0.65
SCNN1A-201ENST00000228916 IGLV1-47P01700 117 aa10.99□□□□□ -0.65
SCNN1A-201ENST00000228916 TMEM108Q6UXF1 575 aa10.99□□□□□ -0.65
SCNN1A-201ENST00000228916 PIP4P1Q86T03 277 aa10.99□□□□□ -0.65
SCNN1A-201ENST00000228916 FBXL15Q9H469 300 aa10.99□□□□□ -0.65
SCNN1A-201ENST00000228916 HIGD1BQ9P298 99 aa10.99□□□□□ -0.65
SCNN1A-201ENST00000228916 PDE6HQ13956 83 aa10.98□□□□□ -0.65
SCNN1A-201ENST00000228916 PSMG4Q5JS54 123 aa10.98□□□□□ -0.65
SCNN1A-201ENST00000228916 SAMD5Q5TGI4 173 aa10.98□□□□□ -0.65
SCNN1A-201ENST00000228916 RNF125Q96EQ8 232 aa10.98□□□□□ -0.65
SCNN1A-201ENST00000228916 SHISA9B4DS77 424 aa10.98□□□□□ -0.65
SCNN1A-201ENST00000228916 SMIM13P0DJ93 91 aa10.98□□□□□ -0.65
SCNN1A-201ENST00000228916 CKS2P33552 79 aa10.98□□□□□ -0.65
SCNN1A-201ENST00000228916 DLX1P56177 255 aa10.98□□□□□ -0.65
SCNN1A-201ENST00000228916 SRSF8Q9BRL6 282 aaKnown RBP10.98□□□□□ -0.65
SCNN1A-201ENST00000228916 ZMAT4Q9H898 229 aa10.98□□□□□ -0.65
SCNN1A-201ENST00000228916 LINC01546A6NGU7 62 aa10.98□□□□□ -0.65
SCNN1A-201ENST00000228916 SMKR1H3BMG3 65 aa10.98□□□□□ -0.65
SCNN1A-201ENST00000228916 PRB3Q04118 309 aaPredicted RBP10.97□□□□□ -0.65
SCNN1A-201ENST00000228916 IL4P05112 153 aa10.97□□□□□ -0.65
SCNN1A-201ENST00000228916 FXYD2P54710 66 aa10.97□□□□□ -0.65
SCNN1A-201ENST00000228916 HHLA3Q9XRX5 114 aa10.97□□□□□ -0.65
SCNN1A-201ENST00000228916 CIDEAO60543 219 aa10.96□□□□□ -0.65
SCNN1A-201ENST00000228916 AAMDCQ9H7C9 122 aa10.96□□□□□ -0.65
SCNN1A-201ENST00000228916 DCHS2Q6V1P9 2916 aa10.96□□□□□ -0.65
SCNN1A-201ENST00000228916 IGKV2D-26A0A0A0MRZ7 120 aa10.96□□□□□ -0.66
SCNN1A-201ENST00000228916 FBLL1A6NHQ2 334 aaKnown RBP10.96□□□□□ -0.66
SCNN1A-201ENST00000228916 FCGR2BP31994 310 aaPredicted RBP10.96□□□□□ -0.66
SCNN1A-201ENST00000228916 BSPH1Q075Z2 132 aa10.96□□□□□ -0.66
SCNN1A-201ENST00000228916 OTOGLQ3ZCN5 2332 aa10.96□□□□□ -0.66
SCNN1A-201ENST00000228916 TM4SF20Q53R12 229 aa10.96□□□□□ -0.66
SCNN1A-201ENST00000228916 BCL6BQ8N143 479 aaPredicted RBP10.96□□□□□ -0.66
SCNN1A-201ENST00000228916 SVEP1Q4LDE5 3571 aa10.96□□□□□ -0.66
SCNN1A-201ENST00000228916 BUB1B-PAK6H3BSN5 160 aa10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 IGLC6P0CF74 106 aa10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 ODF1Q14990 250 aa10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 IGFL3Q6UXB1 125 aa10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 PHLDA1Q8WV24 401 aaPredicted RBP10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 EGR2P11161 476 aaPredicted RBP10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 PLGLAQ15195 96 aa10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 Q6ZS92 163 aa10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 WFDC3Q8IUB2 231 aa10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 PCNX1Q96RV3 2341 aa10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 LRBAP50851 2863 aa10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 GCSHP23434 173 aa10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 TWIST1Q15672 202 aa10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 ZNF562Q6V9R5 426 aa10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 ZNF575Q86XF7 245 aa10.95□□□□□ -0.66
SCNN1A-201ENST00000228916 RELNP78509 3460 aa10.94□□□□□ -0.66
SCNN1A-201ENST00000228916 TEX48A0A1B0GUV7 120 aa10.94□□□□□ -0.66
SCNN1A-201ENST00000228916 VSTM5A8MXK1 200 aa10.94□□□□□ -0.66
SCNN1A-201ENST00000228916 RNF185Q96GF1 192 aa10.94□□□□□ -0.66
SCNN1A-201ENST00000228916 PRR25Q96S07 402 aa10.94□□□□□ -0.66
SCNN1A-201ENST00000228916 PPIAL4GP0DN37 164 aa10.94□□□□□ -0.66
SCNN1A-201ENST00000228916 C18orf15Q96N68 181 aa10.94□□□□□ -0.66
SCNN1A-201ENST00000228916 RNF5Q99942 180 aa10.94□□□□□ -0.66
SCNN1A-201ENST00000228916 CHAC1Q9BUX1 264 aa10.94□□□□□ -0.66
SCNN1A-201ENST00000228916 MAP1LC3AQ9H492 121 aa10.94□□□□□ -0.66
SCNN1A-201ENST00000228916 PSMG3-AS1Q96PY0 264 aa10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 VGLL1Q99990 258 aa10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 ANKRD11Q6UB99 2663 aaPredicted RBP10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 IGKV2-40A0A087WW87 121 aaPredicted RBP10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 IGKV2D-40P01614 121 aaPredicted RBP10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 FCER1GP30273 86 aa10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 CNFNQ9BYD5 112 aa10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 A0A0G2JNJ9 132 aa10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 EVI2AP22794 236 aa10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 SAMD13Q5VXD3 122 aa10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 S100A7AQ86SG5 101 aa10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 FAM57AQ8TBR7 257 aa10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 TM2D2Q9BX73 214 aa10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 TTTY13Q9BZ97 58 aa10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 Q9UFV3 132 aa10.93□□□□□ -0.66
SCNN1A-201ENST00000228916 C16orf97H3BN30 126 aa10.92□□□□□ -0.66
SCNN1A-201ENST00000228916 ZNF80P51504 273 aaPredicted RBP10.92□□□□□ -0.66
SCNN1A-201ENST00000228916 RPL24P83731 157 aaKnown RBP10.92□□□□□ -0.66
SCNN1A-201ENST00000228916 RAB1BQ9H0U4 201 aa10.92□□□□□ -0.66
SCNN1A-201ENST00000228916 PPIAL4CA0A0B4J2A2 164 aa10.92□□□□□ -0.66
SCNN1A-201ENST00000228916 LEPP41159 167 aa10.92□□□□□ -0.66
SCNN1A-201ENST00000228916 SRSF2Q01130 221 aaKnown RBP10.92□□□□□ -0.66
SCNN1A-201ENST00000228916 LINC01559Q495D7 138 aa10.92□□□□□ -0.66
SCNN1A-201ENST00000228916 RNASE6Q93091 150 aaKnown RBP10.92□□□□□ -0.66
SCNN1A-201ENST00000228916 TRBV25-1A0A075B6N4 114 aa10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 K7ERJ3 54 aa10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 CNIH1O95406 144 aa10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 HLA-DRB4P13762 266 aa10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 BMI1P35226 326 aa10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 RPEQ96AT9 228 aa10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 NXT2Q9NPJ8 142 aaKnown RBP10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 HLA-DRB4X5D2U9 266 aa10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 GAS8-AS1O95177 125 aa10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 IGKCP01834 107 aa10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 MSRB1Q9NZV6 116 aa10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 ZGRF1Q86YA3 2104 aa10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 PIEZO2Q9H5I5 2752 aa10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 SCGB1A1P11684 91 aa10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 SRSF1Q07955 248 aaKnown RBP eCLIP10.91□□□□□ -0.66
SCNN1A-201ENST00000228916 GFRALQ6UXV0 394 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms