RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 PnlipQ6P8U6 465 aa8.12□□□□□ -1.11
Col6a5-201ENSMUST00000165165 NgfrQ9Z0W1 417 aa8.12□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Ybx2Q9Z2C8 360 aaKnown RBP8.12□□□□□ -1.11
Col6a5-201ENSMUST00000165165 P01795 144 aa8.12□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Gfi1P70338 423 aa8.12□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Trav12-2A0N8N6 114 aa8.12□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Rpl31P62900 125 aaKnown RBP8.12□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Spint2Q9WU03 252 aa8.12□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Gm10277Q6R5C6 214 aa8.12□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Olfr876Q7TRE4 310 aa8.12□□□□□ -1.11
Col6a5-201ENSMUST00000165165 CyrenQ8BHZ5 157 aa8.12□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Rtn4rQ99PI8 473 aa8.12□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Fam166aQ9D4K5 319 aa8.12□□□□□ -1.11
Col6a5-201ENSMUST00000165165 G6pc2Q9Z186 355 aa8.12□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Trav12n-2A0A075B626 113 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Tgfbr3lD3YZZ2 297 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Gm20939L7N243 523 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Epha8O09127 1004 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 DdtO35215 118 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Rps11P62281 158 aaKnown RBP8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Otx1P80205 355 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 BglapP86546 95 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Bglap2P86547 95 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Plpp1Q61469 283 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Snrnp40Q6PE01 358 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 ClmQ7TSN2 230 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Ltbp2O08999 1813 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Tnfrsf14A0A1W2P7D5 276 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Gm17732E9Q5I2 61 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Gm20825J3QM67 227 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 MsmbO08540 113 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Ssty2Q149W4 227 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Ss18Q62280 418 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Olfr93Q6UAH1 312 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Olfr1381Q7TQT4 311 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Olfr355Q8VFP6 310 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Il25Q8VHH8 169 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Ifitm2Q99J93 144 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 MyogP12979 224 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 SrgnP13609 152 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Nanos3P60324 178 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 AjubaQ91XC0 547 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Tmem50aQ9CXL1 157 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Q9DAL9 119 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 H2-M5A7VMS3 348 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Gm17660B9UIU9 90 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Gm20873J3QMQ9 232 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 GzmbP04187 247 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Icam5Q60625 917 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Olfr91Q7TRL3 312 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Klk10Q99M20 278 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Prss29Q99MS4 279 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Trbv21A0A0A6YX06 97 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Tctn1Q8BZ64 593 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Gpr82Q8BZR0 328 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 P06344 263 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Vmn1r197Q8R265 298 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Tmem160Q9D938 188 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Gnb1lQ9EQ15 326 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Upk3aQ9JKX8 287 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 St6galnac6Q9JM95 333 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Egr4Q9WUF2 478 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 NrapQ80XB4 1728 aa8.11□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Sbf1Q6ZPE2 1867 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Trip12G5E870 2025 aaKnown RBP8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 D930048N14RikA2AA67 225 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Gm15093A2BI72 449 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Gm15097E9QA14 449 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 P18530 117 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Cox5bP19536 128 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Q3UNZ8 350 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Tff3Q62395 81 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Eda2rQ8BX35 297 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 PaxxQ8K0Y7 205 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 ApooQ9DCZ4 198 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Mmp17Q9R0S3 578 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 SiglechB7ZMQ6 332 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Il4P07750 140 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Elovl5Q8BHI7 299 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Neurl3Q8CJC5 254 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Hyls1Q9CXX0 307 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Fscn3Q9QXW4 498 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Ighv6-3A0A075B5T2 118 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Gm4779A0A1B0GR91 561 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Olfr279Q8VFD8 310 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 FmodP50608 376 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Fam3dP97805 223 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Olfr1344Q7TQV3 321 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Tnrc6aQ3UHK8 1896 aaKnown RBP8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Igkv17-121A0A0G2JFA8 117 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 A0A1Y7VMQ4 148 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Fam220aQ3ZN08 260 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 PnkdQ69ZP3 385 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Tnfrsf19Q9JLL3 416 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Hmga2P52927 108 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Lsm6P62313 80 aaKnown RBP8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 SelenotP62342 195 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Ubald2Q8BQH4 164 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Olfr810Q8VFH9 312 aa8.1□□□□□ -1.11
Col6a5-201ENSMUST00000165165 Eva1aQ91WM6 156 aa8.1□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms