RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Gm12728V9GX31 77 aa13.31□□□□□ -0.28
Ckap4-201ENSMUST00000053871 AtrxQ61687 2476 aaKnown RBP13.31□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Ighv1-18A0A0A6YXN4 117 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 1700084M14RikB1AT01 78 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 SpxD3Z752 116 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Znf431E9QAG8 526 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Gm20532G3UXR8 106 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Gm20767O70517 169 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Lax1Q8BHB3 407 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Pear1Q8VIK5 1034 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Olfr1248A0A1L1SSZ5 307 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Olfr1124A2AT86 318 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Wnt2P21552 360 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Zfp72Q0VFY0 435 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Cdkn2aQ64364 169 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Olfr1295Q8VF48 312 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Pbp2Q8VIN1 187 aa13.3□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Olfr1274-psA0A1L1SQ02 309 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Syngr2O55101 224 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 P01790 122 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Cd74P04441 279 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Hoxa5P09021 270 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Pet117P0DJF2 80 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 CenpeQ6RT24 2474 aaKnown RBP13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Zcchc24B2RVL6 241 aaKnown RBP13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Ifitm7G3X9Z2 141 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Ly6c1P0CW02 131 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Id3P41133 119 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Gstp2P46425 210 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Q8CF25 301 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Wipi1Q8R3E3 446 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Spsb4Q8R5B6 273 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Olfr344Q8VFP9 309 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Ythdf2Q91YT7 579 aaKnown RBP13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Mad2l1bpQ9DCX1 276 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Znf22Q9ERU3 237 aa13.29□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Trav6-1A0A075B5Z8 112 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Ctxnd1A0A1B0GST9 59 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Gm6665F6Y363 85 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 P01796 113 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 P01797 113 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 P01799 113 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 P01806 116 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Olfr25Q7TRD6 313 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 BsxQ810B3 232 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Gucd1Q8BZI6 239 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Vsig2Q9Z109 328 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Scgb1b12A0A087WP21 93 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Inafm1E9PV59 130 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Lgals9O08573 353 aaKnown RBP13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 TcapO70548 167 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 P01659 112 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Lyplal1Q3UFF7 239 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Adora3Q61618 319 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Dlx1Q64317 255 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 GfralQ6SJE0 393 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Rab29Q91YQ1 204 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Polr3kQ9CQZ7 108 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Arl13aQ9D416 372 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Gm28845A0A087WR76 214 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Olfr1016A2ASV2 309 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Zfp971A2BFG8 470 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Gm14288E9Q9W0 88 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Cdx1P18111 268 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 C1ql4Q4ZJM9 238 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 PirtQ8BFY0 135 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Harbi1Q8BR93 349 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Cdc34Q8CFI2 235 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Foxn4Q8K3Q3 521 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 SpartQ8R1X6 671 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Spaca3Q9D9X8 221 aa13.28□□□□□ -0.28
Ckap4-201ENSMUST00000053871 DscamQ9ERC8 2013 aa13.27□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Zfp58P16372 489 aa13.27□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Psg17Q62056 475 aa13.27□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Olfr358Q7TRY5 330 aa13.27□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Olfr335-psQ7TRY6 312 aa13.27□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Q8C708 225 aa13.27□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Trib1Q8K4K4 372 aa13.27□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Q8VC23 124 aa13.27□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Olfr1448Q8VFX1 314 aa13.27□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Vmn1r54Q9EPB8 315 aa13.27□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Cd200r1Q9ES57 326 aa13.27□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Crybb1Q9WVJ5 250 aa13.27□□□□□ -0.28
Ckap4-201ENSMUST00000053871 Olfr1191-ps1A0A1L1STD5 311 aa13.27□□□□□ -0.29
Ckap4-201ENSMUST00000053871 H2-M5A7VMS3 348 aa13.27□□□□□ -0.29
Ckap4-201ENSMUST00000053871 Irf2bp2E9Q1P8 570 aa13.27□□□□□ -0.29
Ckap4-201ENSMUST00000053871 Nkx2-8O70584 235 aa13.27□□□□□ -0.29
Ckap4-201ENSMUST00000053871 Rpl23P62830 140 aaKnown RBP13.27□□□□□ -0.29
Ckap4-201ENSMUST00000053871 H2-M10.4Q85ZW8 331 aa13.27□□□□□ -0.29
Ckap4-201ENSMUST00000053871 Aqp11Q8BHH1 271 aa13.27□□□□□ -0.29
Ckap4-201ENSMUST00000053871 Cds2Q99L43 444 aa13.27□□□□□ -0.29
Ckap4-201ENSMUST00000053871 Tex43Q9D9I1 141 aa13.27□□□□□ -0.29
Ckap4-201ENSMUST00000053871 Ighv7-2A0A0A6YX91 119 aa13.26□□□□□ -0.29
Ckap4-201ENSMUST00000053871 Trav12d-1A0N8R0 115 aa13.26□□□□□ -0.29
Ckap4-201ENSMUST00000053871 Taar5Q5QD14 337 aa13.26□□□□□ -0.29
Ckap4-201ENSMUST00000053871 Q80VP5 184 aa13.26□□□□□ -0.29
Ckap4-201ENSMUST00000053871 Bpifa5Q9CQX3 270 aa13.26□□□□□ -0.29
Ckap4-201ENSMUST00000053871 Cyb5r3Q9DCN2 301 aaKnown RBP13.26□□□□□ -0.29
Ckap4-201ENSMUST00000053871 Ccl28Q9JIL2 130 aa13.26□□□□□ -0.29
Ckap4-201ENSMUST00000053871 Gm45800A0A1B0GT24 152 aa13.26□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms