RNA–Protein interactions for RNA: ENST00000640735.1

PAX6-277, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-277ENST00000640735 NIT1Q86X76 327 aa11.96□□□□□ -0.5
PAX6-277ENST00000640735 C18orf32Q8TCD1 76 aa11.96□□□□□ -0.5
PAX6-277ENST00000640735 IGHV3-21A0A0B4J1V1 117 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 VWC2LB2RUY7 222 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 M0R143 59 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 AMTP48728 403 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 MMDQ15546 238 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 TDRG1Q3Y452 100 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 LDLRAD2Q5SZI1 272 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 NPBQ8NG41 125 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 ZNF48Q96MX3 618 aaPredicted RBP11.95□□□□□ -0.5
PAX6-277ENST00000640735 MIEN1Q9BRT3 115 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 CBLN4Q9NTU7 201 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 SOX21Q9Y651 276 aaPredicted RBP11.95□□□□□ -0.5
PAX6-277ENST00000640735 ADGRG4Q8IZF6 3080 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 HIGD1CA8MV81 97 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 WIPF1O43516 503 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 IGKV1-17P01599 117 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 APELAP0DMC3 54 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 SEC61GP60059 68 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 PRB3Q04118 309 aaPredicted RBP11.95□□□□□ -0.5
PAX6-277ENST00000640735 ASPHD1Q5U4P2 390 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 VN1R17PQ8TDU5 208 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 SLC25A39Q9BZJ4 359 aaPredicted RBP11.95□□□□□ -0.5
PAX6-277ENST00000640735 GFRA4Q9GZZ7 299 aa11.95□□□□□ -0.5
PAX6-277ENST00000640735 GSX1Q9H4S2 264 aaPredicted RBP11.95□□□□□ -0.5
PAX6-277ENST00000640735 RPP21Q9H633 154 aaKnown RBP11.95□□□□□ -0.5
PAX6-277ENST00000640735 K7EIM0 57 aa11.94□□□□□ -0.5
PAX6-277ENST00000640735 NUTF2P61970 127 aaKnown RBP11.94□□□□□ -0.5
PAX6-277ENST00000640735 CCDC144NLQ6NUI1 221 aa11.94□□□□□ -0.5
PAX6-277ENST00000640735 LINC00322Q6ZN03 302 aaPredicted RBP11.94□□□□□ -0.5
PAX6-277ENST00000640735 LHFPL4Q7Z7J7 247 aa11.94□□□□□ -0.5
PAX6-277ENST00000640735 PSMG3-AS1Q96PY0 264 aa11.94□□□□□ -0.5
PAX6-277ENST00000640735 FAM231BA6NCW3 169 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 A8MWL6 223 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 USP17L23D6RBM5 183 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 NPIPB6E9PJ23 425 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 TIMM23O14925 209 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 NDUFA3O95167 84 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 C19orf54Q5BKX5 351 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 PRR27Q6MZM9 219 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 VAMP8Q9BV40 100 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 DPM3Q9P2X0 92 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 UTP20O75691 2785 aaKnown RBP11.93□□□□□ -0.5
PAX6-277ENST00000640735 LRRK2Q5S007 2527 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 DIRC3C9JPN6 131 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 M0R1W7 72 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 HTR1DP28221 377 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 OR4B1Q8NGF8 309 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 RASL11BQ9BPW5 248 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 RAB1BQ9H0U4 201 aa11.93□□□□□ -0.5
PAX6-277ENST00000640735 SPTBN1Q01082 2364 aaKnown RBP11.92□□□□□ -0.5
PAX6-277ENST00000640735 FBLL1A6NHQ2 334 aaKnown RBP11.92□□□□□ -0.5
PAX6-277ENST00000640735 M0QZK8 103 aa11.92□□□□□ -0.5
PAX6-277ENST00000640735 CTRLP40313 264 aa11.92□□□□□ -0.5
PAX6-277ENST00000640735 KRTDAPP60985 99 aa11.92□□□□□ -0.5
PAX6-277ENST00000640735 LYZP61626 148 aa11.92□□□□□ -0.5
PAX6-277ENST00000640735 SERTAD4-AS1Q5TG53 156 aa11.92□□□□□ -0.5
PAX6-277ENST00000640735 DUX5Q96PT3 197 aa11.92□□□□□ -0.5
PAX6-277ENST00000640735 SHANK2-AS3Q9BTD1 123 aa11.92□□□□□ -0.5
PAX6-277ENST00000640735 FAM103A1Q9BTL3 118 aaKnown RBP11.92□□□□□ -0.5
PAX6-277ENST00000640735 ODF3BA8MYP8 253 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 NBR2O15453 112 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 IGLV2-11P01706 119 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 COX6B1P14854 86 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 PMCHP20382 165 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 LEMD1Q68G75 181 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 Q86TA4 180 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 RPH3ALQ9UNE2 315 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 COL12A1Q99715 3063 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 H3BRN7 92 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 P01737 135 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 COL8A1P27658 744 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 RAB9AP51151 201 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 HBBP68871 147 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 GTSF1Q8WW33 167 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 SGK494Q96LW2 274 aa11.91□□□□□ -0.5
PAX6-277ENST00000640735 C3orf79P0CE67 100 aa11.9□□□□□ -0.5
PAX6-277ENST00000640735 PRTN3P24158 256 aa11.9□□□□□ -0.5
PAX6-277ENST00000640735 G0S2P27469 103 aa11.9□□□□□ -0.5
PAX6-277ENST00000640735 CEACAM3P40198 252 aa11.9□□□□□ -0.5
PAX6-277ENST00000640735 PLGLAQ15195 96 aa11.9□□□□□ -0.5
PAX6-277ENST00000640735 C11orf71Q6IPW1 123 aa11.9□□□□□ -0.5
PAX6-277ENST00000640735 LYPD1Q8N2G4 141 aa11.9□□□□□ -0.5
PAX6-277ENST00000640735 CNIH1O95406 144 aa11.9□□□□□ -0.51
PAX6-277ENST00000640735 IGLC2P0DOY2 106 aa11.9□□□□□ -0.51
PAX6-277ENST00000640735 TCF24Q7RTU0 167 aa11.9□□□□□ -0.51
PAX6-277ENST00000640735 NEU4Q8WWR8 484 aaPredicted RBP11.9□□□□□ -0.51
PAX6-277ENST00000640735 TIMD4Q96H15 378 aa11.9□□□□□ -0.51
PAX6-277ENST00000640735 PAM16Q9Y3D7 125 aa11.9□□□□□ -0.51
PAX6-277ENST00000640735 TRBV19A0A075B6N1 114 aa11.89□□□□□ -0.51
PAX6-277ENST00000640735 WI2-2373I1.2A0A1W2PRP0 233 aa11.89□□□□□ -0.51
PAX6-277ENST00000640735 A6NNC1 897 aa11.89□□□□□ -0.51
PAX6-277ENST00000640735 H3BTX0 84 aa11.89□□□□□ -0.51
PAX6-277ENST00000640735 MRPS12O15235 138 aaKnown RBP11.89□□□□□ -0.51
PAX6-277ENST00000640735 FOXA3P55318 350 aaPredicted RBP11.89□□□□□ -0.51
PAX6-277ENST00000640735 FAM162BQ5T6X4 162 aa11.89□□□□□ -0.51
PAX6-277ENST00000640735 ZNF705AQ6ZN79 300 aaPredicted RBP11.89□□□□□ -0.51
PAX6-277ENST00000640735 ZNF491Q8N8L2 437 aa11.89□□□□□ -0.51
PAX6-277ENST00000640735 TMEM89A2RUT3 159 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms