RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 NAA20P61599 178 aa-2.04□□□□□ -2.74
SCN1A-215ENST00000637285 SNRPD2P62316 118 aaKnown RBP-2.04□□□□□ -2.74
SCN1A-215ENST00000637285 KLK9Q2XQG4 91 aa-2.04□□□□□ -2.74
SCN1A-215ENST00000637285 LRRC18Q8N456 261 aa-2.04□□□□□ -2.74
SCN1A-215ENST00000637285 OR51D1Q8NGF3 324 aa-2.04□□□□□ -2.74
SCN1A-215ENST00000637285 HYLS1Q96M11 299 aa-2.04□□□□□ -2.74
SCN1A-215ENST00000637285 BPESC1Q9GZL8 116 aa-2.04□□□□□ -2.74
SCN1A-215ENST00000637285 RNF122Q9H9V4 155 aa-2.04□□□□□ -2.74
SCN1A-215ENST00000637285 MRPL35Q9NZE8 188 aaKnown RBP-2.04□□□□□ -2.74
SCN1A-215ENST00000637285 HECTD1Q9ULT8 2610 aa-2.04□□□□□ -2.74
SCN1A-215ENST00000637285 RABL2BQ9UNT1 228 aa-2.04□□□□□ -2.74
SCN1A-215ENST00000637285 TNS1Q9HBL0 1735 aaKnown RBP-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 HECW2Q9P2P5 1572 aa-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 A0A0G2JMM0 328 aa-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 A0A1W2PPB8 328 aa-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 KIR3DP1A8MWS1 328 aa-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 PET100P0DJ07 73 aa-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 SRIP30626 198 aa-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 ALKAL1Q6UXT8 129 aa-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 DEFB132Q7Z7B7 95 aa-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 KRT222Q8N1A0 295 aa-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 SREK1IP1Q8N9Q2 155 aaPredicted RBP-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 BCL7BQ9BQE9 202 aa-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 NCOR1P1Q9H4R4 102 aa-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 RABL2AQ9UBK7 228 aaPredicted RBP-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 DOCK5Q9H7D0 1870 aa-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 ITPR3Q14573 2671 aa-2.05□□□□□ -2.74
SCN1A-215ENST00000637285 CDK13Q14004 1512 aaKnown RBP-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 NEO1Q92859 1461 aa-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 A0A087WTM6 91 aa-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 EEF1E1-BLOC1S5C9J1V9 151 aa-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 F8VZ95 297 aa-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 GYPBP06028 91 aa-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 SULT1A1P50225 295 aa-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 MYL5Q02045 173 aa-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 NEDD8Q15843 81 aa-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 SDHAF4Q5VUM1 108 aa-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 C22orf39Q6P5X5 142 aa-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 OR5D16Q8NGK9 328 aa-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 GRPEL2Q8TAA5 225 aa-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 OR52E6Q96RD3 313 aa-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 C20orf27Q9GZN8 174 aa-2.06□□□□□ -2.74
SCN1A-215ENST00000637285 ATG2AQ2TAZ0 1938 aa-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 NUP155O75694 1391 aa-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 MAP2P11137 1827 aaKnown RBP-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 AFDNP55196 1824 aaKnown RBP-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 RBP1P09455 135 aa-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 MYL12AP19105 171 aa-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 RPL5P46777 297 aaKnown RBP-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 CLVS2Q5SYC1 327 aa-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 SPOPLQ6IQ16 392 aa-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 C20orf196Q8IYI0 205 aa-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 GPATCH11Q8N954 259 aa-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 STAG3L4Q8TBR4 150 aa-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 ZHX1-C8orf76Q96EF9 292 aa-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 CCDC90BQ9GZT6 254 aa-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 TMEM133Q9H2Q1 129 aa-2.07□□□□□ -2.74
SCN1A-215ENST00000637285 hDV103S1A0JD37 113 aa-2.08□□□□□ -2.74
SCN1A-215ENST00000637285 SSNA1O43805 119 aa-2.08□□□□□ -2.74
SCN1A-215ENST00000637285 PIAS1O75925 651 aa-2.08□□□□□ -2.74
SCN1A-215ENST00000637285 KRR1Q13601 381 aaKnown RBP-2.08□□□□□ -2.74
SCN1A-215ENST00000637285 LRRN1Q6UXK5 716 aa-2.08□□□□□ -2.74
SCN1A-215ENST00000637285 CHCHD1Q96BP2 118 aaKnown RBP-2.08□□□□□ -2.74
SCN1A-215ENST00000637285 MSANTD3Q96H12 275 aa-2.08□□□□□ -2.74
SCN1A-215ENST00000637285 C2orf50Q96LR7 162 aa-2.08□□□□□ -2.74
SCN1A-215ENST00000637285 YPEL2Q96QA6 119 aa-2.08□□□□□ -2.74
SCN1A-215ENST00000637285 SIPA1L2Q9P2F8 1722 aaPredicted RBP-2.08□□□□□ -2.74
SCN1A-215ENST00000637285 GVQW2A0A096LPI5 108 aaPredicted RBP-2.09□□□□□ -2.74
SCN1A-215ENST00000637285 DUXBA0A1W2PPF3 345 aa-2.09□□□□□ -2.74
SCN1A-215ENST00000637285 PFDN6O15212 129 aa-2.09□□□□□ -2.74
SCN1A-215ENST00000637285 AP3S2P59780 193 aa-2.09□□□□□ -2.74
SCN1A-215ENST00000637285 SFXN4Q6P4A7 337 aa-2.09□□□□□ -2.74
SCN1A-215ENST00000637285 CSAG1Q6PB30 78 aa-2.09□□□□□ -2.74
SCN1A-215ENST00000637285 ARL5BQ96KC2 179 aa-2.09□□□□□ -2.74
SCN1A-215ENST00000637285 AP1S3Q96PC3 154 aa-2.09□□□□□ -2.74
SCN1A-215ENST00000637285 OR51I1Q9H343 314 aa-2.09□□□□□ -2.74
SCN1A-215ENST00000637285 NCOA1Q15788 1441 aa-2.09□□□□□ -2.74
SCN1A-215ENST00000637285 MYO5AQ9Y4I1 1855 aaKnown RBP-2.09□□□□□ -2.74
SCN1A-215ENST00000637285 GVINP1Q7Z2Y8 2422 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 FAM159BA6NKW6 160 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 ZNF815PA8K554 130 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 HIGD1CA8MV81 97 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 C9JAW5 83 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 J3QRK9 145 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 NDUFS8O00217 210 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 SMIM17P0DL12 118 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 HIST1H1TP22492 207 aaPredicted RBP-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 RANP62826 216 aaKnown RBP-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 AESQ08117 197 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 TMED1Q13445 227 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 HACD4Q5VWC8 232 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 EIF5AL1Q6IS14 154 aaKnown RBP-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 SSBP3-AS1Q7Z2R9 100 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 OR4K15Q8NH41 348 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 PIGXQ8TBF5 258 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 PPP1R2P1Q96PQ5 205 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 PKIGQ9Y2B9 76 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 LAMC1P11047 1609 aa-2.1□□□□□ -2.75
SCN1A-215ENST00000637285 OR5G3P0C626 314 aa-2.11□□□□□ -2.75
SCN1A-215ENST00000637285 CCDC172P0C7W6 258 aa-2.11□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms