RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 TPPP3Q9BW30 176 aa10.4□□□□□ -0.74
CHD1L-210ENST00000622533 GFRA4Q9GZZ7 299 aa10.4□□□□□ -0.74
CHD1L-210ENST00000622533 TACC2O95359 2948 aa10.4□□□□□ -0.75
CHD1L-210ENST00000622533 K7ERJ3 54 aa10.4□□□□□ -0.75
CHD1L-210ENST00000622533 ARMS2P0C7Q2 107 aa10.4□□□□□ -0.75
CHD1L-210ENST00000622533 CD40P25942 277 aa10.4□□□□□ -0.75
CHD1L-210ENST00000622533 CSN1S1P47710 185 aa10.4□□□□□ -0.75
CHD1L-210ENST00000622533 TRGV9Q99603 122 aa10.4□□□□□ -0.75
CHD1L-210ENST00000622533 SPTBN4Q9H254 2564 aa10.39□□□□□ -0.75
CHD1L-210ENST00000622533 RUSC1-AS1Q66K80 236 aa10.39□□□□□ -0.75
CHD1L-210ENST00000622533 WFDC3Q8IUB2 231 aa10.39□□□□□ -0.75
CHD1L-210ENST00000622533 C18orf15Q96N68 181 aa10.39□□□□□ -0.75
CHD1L-210ENST00000622533 CADP27708 2225 aa10.39□□□□□ -0.75
CHD1L-210ENST00000622533 A0A096LNJ9 63 aa10.39□□□□□ -0.75
CHD1L-210ENST00000622533 PSG3Q16557 428 aa10.39□□□□□ -0.75
CHD1L-210ENST00000622533 FAM215AQ9Y5M1 114 aa10.39□□□□□ -0.75
CHD1L-210ENST00000622533 APC2O95996 2303 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 SPTAN1Q13813 2472 aaKnown RBP10.38□□□□□ -0.75
CHD1L-210ENST00000622533 SPAARA0A1B0GVQ0 90 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 CGB1A6NKQ9 187 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 LTAP01374 205 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 SMIM17P0DL12 118 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 GCSHP23434 173 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 SRSF6Q13247 344 aaKnown RBP10.38□□□□□ -0.75
CHD1L-210ENST00000622533 DEFB109BQ30KR1 87 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 C10orf55Q5SWW7 151 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 ASCL5Q7RTU5 278 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 HAX1O00165 279 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 IGLV2-23P01705 113 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 CRYGCP07315 174 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 TMEM200BQ69YZ2 307 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 PVRIGQ6DKI7 326 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 TTTY13Q9BZ97 58 aa10.38□□□□□ -0.75
CHD1L-210ENST00000622533 GAGE12HA6NDE8 117 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 NDUFS8O00217 210 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 PRNTQ86SH4 94 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 ATP6V0BQ99437 205 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 RAB9AP51151 201 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 FXYD2P54710 66 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 IGFL3Q6UXB1 125 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 SRSF12Q8WXF0 261 aaKnown RBP10.37□□□□□ -0.75
CHD1L-210ENST00000622533 CHD8Q9HCK8 2581 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 ASH1LQ9NR48 2969 aaKnown RBP10.37□□□□□ -0.75
CHD1L-210ENST00000622533 IGHV3-21A0A0B4J1V1 117 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 A0A1B0GV72 72 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 C17orf100A8MU93 164 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.37□□□□□ -0.75
CHD1L-210ENST00000622533 NDUFB3O43676 98 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 SMIM13P0DJ93 91 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 CCL3L1P16619 93 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 WFDC2Q14508 124 aa10.37□□□□□ -0.75
CHD1L-210ENST00000622533 SERTM2A0A1B0GWG4 89 aa10.36□□□□□ -0.75
CHD1L-210ENST00000622533 OVOL3O00110 214 aa10.36□□□□□ -0.75
CHD1L-210ENST00000622533 TCRAP04437 139 aa10.36□□□□□ -0.75
CHD1L-210ENST00000622533 CCL8P80075 99 aa10.36□□□□□ -0.75
CHD1L-210ENST00000622533 CCDC144NLQ6NUI1 221 aa10.36□□□□□ -0.75
CHD1L-210ENST00000622533 PIP4P1Q86T03 277 aa10.36□□□□□ -0.75
CHD1L-210ENST00000622533 MTURNQ8N3F0 131 aa10.36□□□□□ -0.75
CHD1L-210ENST00000622533 Q9H3A6 140 aa10.36□□□□□ -0.75
CHD1L-210ENST00000622533 SMPXQ9UHP9 88 aa10.36□□□□□ -0.75
CHD1L-210ENST00000622533 A0A1B0GUT8 65 aa10.36□□□□□ -0.75
CHD1L-210ENST00000622533 A0A1W2PPI3 338 aa10.36□□□□□ -0.75
CHD1L-210ENST00000622533 WT1P19544 449 aaPredicted RBP10.36□□□□□ -0.75
CHD1L-210ENST00000622533 CEACAM3P40198 252 aa10.36□□□□□ -0.75
CHD1L-210ENST00000622533 OR9G4Q8NGQ1 327 aa10.36□□□□□ -0.75
CHD1L-210ENST00000622533 IGF2-ASQ6U949 168 aa10.35□□□□□ -0.75
CHD1L-210ENST00000622533 SH2D6Q7Z4S9 175 aa10.35□□□□□ -0.75
CHD1L-210ENST00000622533 OR4X2Q8NGF9 303 aa10.35□□□□□ -0.75
CHD1L-210ENST00000622533 C8orf46Q8TAG6 207 aa10.35□□□□□ -0.75
CHD1L-210ENST00000622533 DKK2Q9UBU2 259 aa10.35□□□□□ -0.75
CHD1L-210ENST00000622533 TMEM238LA0A1B0GVL6 79 aa10.35□□□□□ -0.75
CHD1L-210ENST00000622533 SLC25A17O43808 307 aa10.35□□□□□ -0.75
CHD1L-210ENST00000622533 CD300EQ496F6 205 aaPredicted RBP10.35□□□□□ -0.75
CHD1L-210ENST00000622533 BCL6BQ8N143 479 aaPredicted RBP10.35□□□□□ -0.75
CHD1L-210ENST00000622533 C22orf46C9J442 243 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 TMEM178BH3BS89 294 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 FTH1P19P0C7X4 201 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 GP9P14770 177 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 GOLT1AQ6ZVE7 132 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 EXOC3-AS1Q8N2X6 119 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 SIGLEC8Q9NYZ4 499 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 ATRXP46100 2492 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 VSTM5A8MXK1 200 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 D6R8Y8 96 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 APELAP0DMC3 54 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 RPL27AP46776 148 aaKnown RBP10.34□□□□□ -0.75
CHD1L-210ENST00000622533 CKS1BP61024 79 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 FAM27E3Q08E93 113 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 RPRMLQ8N4K4 120 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 DPF1Q92782 380 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 OTORQ9NRC9 128 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 IGF2RP11717 2491 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 TRAV26-1A0A087WT03 109 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 ZNF785A8K8V0 405 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 SCGB1A1P11684 91 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 LGALS9BQ3B8N2 356 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 LGALS9CQ6DKI2 356 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 Q86TA4 180 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 ZNF414Q96IQ9 312 aa10.34□□□□□ -0.75
CHD1L-210ENST00000622533 VGLL1Q99990 258 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms