RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 TGFBR1P36897 503 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 RND2P52198 227 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 SUB1P53999 127 aaKnown RBP eCLIP5.56□□□□□ -1.52
SMPD3-206ENST00000566009 ARPC4P59998 168 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 C14orf177Q52M58 125 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 FAM122CQ6P4D5 195 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 DPPA3Q6W0C5 159 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 CLVS1Q8IUQ0 354 aaPredicted RBP5.56□□□□□ -1.52
SMPD3-206ENST00000566009 OR8I2Q8N0Y5 310 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 ZNF664Q8N3J9 261 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 RNF182Q8N6D2 247 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 C11orf72Q8NBR9 251 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 OR5AP2Q8NGF4 316 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 OR8A1Q8NGG7 326 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 OR4A16Q8NH70 328 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 SLC25A38Q96DW6 304 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 VGLL1Q99990 258 aa5.56□□□□□ -1.52
SMPD3-206ENST00000566009 RSL24D1Q9UHA3 163 aaKnown RBP5.56□□□□□ -1.52
SMPD3-206ENST00000566009 SSPOA2VEC9 5147 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 IGKV2D-24A0A075B6R9 120 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 IGKV1OR2-108A0A075B7D4 117 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 TRAV8-2A0A0B4J237 113 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 H3BMQ9 156 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 PTHLHP12272 177 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 F2RP25116 425 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 PRSS3P35030 304 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 TOR2AQ5JU69 321 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 UBE2NLQ5JXB2 153 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 GFI1BQ5VTD9 330 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 GPR107Q5VW38 600 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 OR8G2PQ6IF36 304 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 PRSS54Q6PEW0 395 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 DHRS11Q6UWP2 260 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 SAMD12Q8N8I0 201 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 ZNF738Q8NE65 137 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 GTSF1Q8WW33 167 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 RMI2Q96E14 147 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 RNF185Q96GF1 192 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 RSG1Q9BU20 258 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 FUNDC2Q9BWH2 189 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 SLC5A7Q9GZV3 580 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 KLF12Q9Y4X4 402 aa5.55□□□□□ -1.52
SMPD3-206ENST00000566009 LOC100131303A0A0U1RQF7 123 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 A0A1B0GVG6 124 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 MEIS3P1A6NDR6 274 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 CCDC160A6NGH7 325 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 INS-IGF2F8WCM5 200 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 PPYP01298 95 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 RFX2P48378 723 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 VBP1P61758 197 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 DGAT2L7PQ6IED9 249 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 ZNF818PQ6ZRF7 136 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 SH2D6Q7Z4S9 175 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 DAZ4Q86SG3 579 aaKnown RBP5.54□□□□□ -1.52
SMPD3-206ENST00000566009 LYSMD2Q8IV50 215 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 IQCF2Q8IXL9 164 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 PYGO2Q9BRQ0 406 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 IFT46Q9NQC8 304 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 DAZ3Q9NR90 486 aaKnown RBP5.54□□□□□ -1.52
SMPD3-206ENST00000566009 MRPL16Q9NX20 251 aaKnown RBP5.54□□□□□ -1.52
SMPD3-206ENST00000566009 COMMD3Q9UBI1 195 aa5.54□□□□□ -1.52
SMPD3-206ENST00000566009 NXPH3O95157 252 aa5.53□□□□□ -1.52
SMPD3-206ENST00000566009 APOA1P02647 267 aa5.53□□□□□ -1.52
SMPD3-206ENST00000566009 PMP2P02689 132 aa5.53□□□□□ -1.52
SMPD3-206ENST00000566009 VAMP1P23763 118 aa5.53□□□□□ -1.52
SMPD3-206ENST00000566009 TAS2R20P59543 309 aa5.53□□□□□ -1.52
SMPD3-206ENST00000566009 FXYD4P59646 89 aa5.53□□□□□ -1.52
SMPD3-206ENST00000566009 NCS1P62166 190 aa5.53□□□□□ -1.52
SMPD3-206ENST00000566009 SPCS2Q15005 226 aa5.53□□□□□ -1.52
SMPD3-206ENST00000566009 CTF1Q16619 201 aa5.53□□□□□ -1.52
SMPD3-206ENST00000566009 MZT2AQ6P582 158 aa5.53□□□□□ -1.52
SMPD3-206ENST00000566009 ZNF680Q8NEM1 530 aa5.53□□□□□ -1.52
SMPD3-206ENST00000566009 BORCS5Q969J3 196 aa5.53□□□□□ -1.52
SMPD3-206ENST00000566009 DNAJC30Q96LL9 226 aa5.53□□□□□ -1.52
SMPD3-206ENST00000566009 PARD6GQ9BYG4 376 aaPredicted RBP5.53□□□□□ -1.52
SMPD3-206ENST00000566009 PLAC8Q9NZF1 115 aa5.53□□□□□ -1.52
SMPD3-206ENST00000566009 GGTLC3B5MD39 225 aa5.52□□□□□ -1.53
SMPD3-206ENST00000566009 SFTA3P0C7M3 94 aa5.52□□□□□ -1.53
SMPD3-206ENST00000566009 CHTF8P0CG12 524 aa5.52□□□□□ -1.53
SMPD3-206ENST00000566009 GALR1P47211 349 aa5.52□□□□□ -1.53
SMPD3-206ENST00000566009 TMBIM6P55061 237 aa5.52□□□□□ -1.53
SMPD3-206ENST00000566009 HERV-K104P61576 105 aa5.52□□□□□ -1.53
SMPD3-206ENST00000566009 CACNG7P62955 275 aa5.52□□□□□ -1.53
SMPD3-206ENST00000566009 DMRTA1Q5VZB9 504 aa5.52□□□□□ -1.53
SMPD3-206ENST00000566009 LPCAT3Q6P1A2 487 aa5.52□□□□□ -1.53
SMPD3-206ENST00000566009 PRR26Q8N8Z3 221 aa5.52□□□□□ -1.53
SMPD3-206ENST00000566009 NHLRC2Q8NBF2 726 aa5.52□□□□□ -1.53
SMPD3-206ENST00000566009 OR5H2Q8NGV7 314 aa5.52□□□□□ -1.53
SMPD3-206ENST00000566009 NPIPB3Q92617 1050 aa5.52□□□□□ -1.53
SMPD3-206ENST00000566009 RRNAD1Q96FB5 475 aaKnown RBP5.52□□□□□ -1.53
SMPD3-206ENST00000566009 ZNF2Q9BSG1 426 aaPredicted RBP5.52□□□□□ -1.53
SMPD3-206ENST00000566009 EHFQ9NZC4 300 aa5.52□□□□□ -1.53
SMPD3-206ENST00000566009 FCGBPQ9Y6R7 5405 aaPredicted RBP5.52□□□□□ -1.53
SMPD3-206ENST00000566009 MACF1Q9UPN3 7388 aaKnown RBP5.52□□□□□ -1.53
SMPD3-206ENST00000566009 TRAV12-3A0A0B4J271 114 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 TEX13DA0A0J9YY54 714 aaPredicted RBP5.51□□□□□ -1.53
SMPD3-206ENST00000566009 FAM25AB3EWG3 89 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 FAM25CB3EWG5 89 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 FAM25GB3EWG6 89 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms