RNA–Protein interactions for RNA: ENST00000561211.5

USP8-217, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-217ENST00000561211 COMMD3Q9UBI1 195 aa1.92□□□□□ -2.1
USP8-217ENST00000561211 COL27A1Q8IZC6 1860 aaPredicted RBP1.92□□□□□ -2.1
USP8-217ENST00000561211 THADAQ6YHU6 1953 aa1.92□□□□□ -2.1
USP8-217ENST00000561211 CACNA1DQ01668 2161 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 PRR14LQ5THK1 2151 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 NYNRINQ9P2P1 1898 aaKnown RBP1.91□□□□□ -2.1
USP8-217ENST00000561211 IGKV2-28A0A075B6P5 120 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 TRGV5A0A0B4J1U4 118 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 TRBV10-2A0A0K0K1G8 114 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 LRCOL1A6NCL2 159 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 CDC42EP2O14613 210 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 GNRH2O43555 120 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 CPSF4O95639 269 aaKnown RBP1.91□□□□□ -2.1
USP8-217ENST00000561211 IGKV2D-28P01615 120 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 IGLV1-51P01701 117 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 TRGC1P0CF51 173 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 AKAIN1P0CW23 69 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 NFYAP23511 347 aaPredicted RBP1.91□□□□□ -2.1
USP8-217ENST00000561211 HES1Q14469 280 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 Q6ZQT0 140 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 IFT20Q8IY31 132 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 C10orf111Q8N326 155 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 AQP3Q92482 292 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 MCEEQ96PE7 176 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 MIEN1Q9BRT3 115 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 SLC35B3Q9H1N7 401 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 CCDC167Q9P0B6 97 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 IER3IP1Q9Y5U9 82 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 MYOM3Q5VTT5 1437 aa1.91□□□□□ -2.1
USP8-217ENST00000561211 LCTP09848 1927 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 TRAV30A0A087WSZ9 112 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 A0A0G2JMM0 328 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 A0A1B0GVG6 124 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 A0A1W2PPB8 328 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 C11orf86A6NJI1 115 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 A6NN06 94 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 KIR3DP1A8MWS1 328 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 B4DSR2 109 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 H7C2G1 150 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 OR1I1O60431 355 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 IFNA17P01571 189 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 CTSDP07339 412 aaPredicted RBP1.9□□□□□ -2.11
USP8-217ENST00000561211 DEFA4P12838 97 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 GNG4P50150 75 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 SNRPD3P62318 126 aaKnown RBP1.9□□□□□ -2.11
USP8-217ENST00000561211 MOBPQ13875 183 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 IZUMO2Q6UXV1 221 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 AAED1Q7RTV5 226 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 FAM216BQ8N7L0 139 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 DEDD2Q8WXF8 326 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 PKMYT1Q99640 499 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 BCL2L10Q9HD36 194 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 TXNL4BQ9NX01 149 aaKnown RBP1.9□□□□□ -2.11
USP8-217ENST00000561211 LSM2Q9Y333 95 aaKnown RBP1.9□□□□□ -2.11
USP8-217ENST00000561211 SOX21Q9Y651 276 aaPredicted RBP1.9□□□□□ -2.11
USP8-217ENST00000561211 TRPM3Q9HCF6 1732 aaPredicted RBP1.9□□□□□ -2.11
USP8-217ENST00000561211 SDK2Q58EX2 2172 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 NUP210LQ5VU65 1888 aa1.9□□□□□ -2.11
USP8-217ENST00000561211 ATG2AQ2TAZ0 1938 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 SEC16AO15027 2179 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 A2ML1A8K2U0 1454 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 COL1A1P02452 1464 aaPredicted RBP1.89□□□□□ -2.11
USP8-217ENST00000561211 ABCC10Q5T3U5 1492 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 ANKRD31Q8N7Z5 1873 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 TRBV20-1A0A075B6N2 111 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 TRAV12-2A0A075B6T6 113 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 M0R143 59 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 SYNGR2O43760 224 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 CREBL2O60519 120 aaPredicted RBP1.89□□□□□ -2.11
USP8-217ENST00000561211 CD3DP04234 171 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 IL4P05112 153 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 CD14P08571 375 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 PYYP10082 97 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 CRYGAP11844 174 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 ROMO1P60602 79 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 PKIAP61925 76 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 MRPS36P82909 103 aaKnown RBP1.89□□□□□ -2.11
USP8-217ENST00000561211 CDK6Q00534 326 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 MYL5Q02045 173 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 KLRD1Q13241 179 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 CDK5R1Q15078 307 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 FAM27BQ5VT28 67 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 TMEM136Q6ZRR5 245 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 C8orf59Q8N0T1 100 aaPredicted RBP1.89□□□□□ -2.11
USP8-217ENST00000561211 PLPP5Q8NEB5 264 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 OR4B1Q8NGF8 309 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 PSMF1Q92530 271 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 ZNF714Q96N38 554 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 R4GN34 69 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 MINOS1-NBL1R4GNA1 71 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 SLIT3O75094 1523 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 DLC1Q96QB1 1528 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 KIAA1107Q9UPP5 1409 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 ANAPC1Q9H1A4 1944 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 KDM5CP41229 1560 aa1.89□□□□□ -2.11
USP8-217ENST00000561211 SHANK3Q9BYB0 1731 aa1.88□□□□□ -2.11
USP8-217ENST00000561211 CITO14578 2027 aa1.88□□□□□ -2.11
USP8-217ENST00000561211 IGLV3-12A0A075B6K2 115 aa1.88□□□□□ -2.11
USP8-217ENST00000561211 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.88□□□□□ -2.11
USP8-217ENST00000561211 IGHV1-18A0A0C4DH31 117 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms