RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SRSF2Q01130 221 aaKnown RBP7.58□□□□□ -1.2
RTF1-206ENST00000560447 SAPCD1Q5SSQ6 148 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 CDPF1Q6NVV7 123 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 CLEC2AQ6UVW9 174 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 TOMM20LQ6UXN7 152 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 REC114Q7Z4M0 266 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 MRPL52Q86TS9 123 aaKnown RBP7.58□□□□□ -1.2
RTF1-206ENST00000560447 FAM223AQ8IWN6 122 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 SIGLECL1Q8N7X8 197 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 EEF1AKMT3Q96AZ1 226 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 CCL19Q99731 98 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 SAMD10Q9BYL1 202 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 RPH3ALQ9UNE2 315 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 CT45A10P0DMU9 189 aa7.57□□□□□ -1.2
RTF1-206ENST00000560447 SRIP30626 198 aa7.57□□□□□ -1.2
RTF1-206ENST00000560447 RPS20P60866 119 aaKnown RBP7.57□□□□□ -1.2
RTF1-206ENST00000560447 RELQ04864 619 aaPredicted RBP7.57□□□□□ -1.2
RTF1-206ENST00000560447 KLF17Q5JT82 389 aaPredicted RBP7.57□□□□□ -1.2
RTF1-206ENST00000560447 EXOC3-AS1Q8N2X6 119 aa7.57□□□□□ -1.2
RTF1-206ENST00000560447 C5orf56Q8N8D9 126 aa7.57□□□□□ -1.2
RTF1-206ENST00000560447 C18orf32Q8TCD1 76 aa7.57□□□□□ -1.2
RTF1-206ENST00000560447 MRPL53Q96EL3 112 aaKnown RBP7.57□□□□□ -1.2
RTF1-206ENST00000560447 SLC50A1Q9BRV3 221 aa7.57□□□□□ -1.2
RTF1-206ENST00000560447 ZNF580Q9UK33 172 aa7.57□□□□□ -1.2
RTF1-206ENST00000560447 SPTBN4Q9H254 2564 aa7.57□□□□□ -1.2
RTF1-206ENST00000560447 KIR2DL5BA0A0G2JN68 375 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 KIR2DL5BA0A0G2JPC4 375 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 RBAKDNA6NC62 111 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 ATP6V0E1O15342 81 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 NUPR1O60356 82 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 ZNF324O75467 553 aaPredicted RBP7.56□□□□□ -1.2
RTF1-206ENST00000560447 SCGB1D1O95968 90 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 CA1P00915 261 aaPredicted RBP7.56□□□□□ -1.2
RTF1-206ENST00000560447 PMCHP20382 165 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 SLAQ13239 276 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 RIGQ13278 110 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 FBLN7Q53RD9 439 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 C19orf54Q5BKX5 351 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 FAM120AOSQ5T036 256 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 SHISA2Q6UWI4 295 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 TEX43Q6ZNM6 134 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 PRNTQ86SH4 94 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 LURAP1LQ8IV03 231 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 KIR2DL5AQ8N109 375 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 HSPB9Q9BQS6 159 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 ALKBH7Q9BT30 221 aaPredicted RBP7.56□□□□□ -1.2
RTF1-206ENST00000560447 NDFIP1Q9BT67 221 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 NDUFAF3Q9BU61 184 aa7.56□□□□□ -1.2
RTF1-206ENST00000560447 SSBP4Q9BWG4 385 aaPredicted RBP7.56□□□□□ -1.2
RTF1-206ENST00000560447 TRAV20A0A0B4J274 112 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 A0A1B0GUT8 65 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 A0A1W2PS18 150 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 OR2T8A6NH00 312 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 SPINK4O60575 86 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 IGF1P05019 195 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 FRMD6-AS1P0C7T7 363 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 BMI1P35226 326 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 SLC35B1P78383 322 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 RHOGP84095 191 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 C15orf32Q32M92 178 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 FAM209BQ5JX69 171 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 LINC00322Q6ZN03 302 aaPredicted RBP7.55□□□□□ -1.2
RTF1-206ENST00000560447 Q6ZWC4 215 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 ZNF664Q8N3J9 261 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 OR2D3Q8NGH3 330 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 GTSF1Q8WW33 167 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 BORCS7Q96B45 105 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 CHCHD1Q96BP2 118 aaKnown RBP7.55□□□□□ -1.2
RTF1-206ENST00000560447 C20orf144Q9BQM9 153 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 HIF1ANQ9NWT6 349 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 COL6A6A6NMZ7 2263 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 ATRXP46100 2492 aa7.55□□□□□ -1.2
RTF1-206ENST00000560447 A0A1B0GUS0 222 aa7.54□□□□□ -1.2
RTF1-206ENST00000560447 H3BTX0 84 aa7.54□□□□□ -1.2
RTF1-206ENST00000560447 APOHP02749 345 aaPredicted RBP7.54□□□□□ -1.2
RTF1-206ENST00000560447 SLC25A16P16260 332 aa7.54□□□□□ -1.2
RTF1-206ENST00000560447 AMTP48728 403 aa7.54□□□□□ -1.2
RTF1-206ENST00000560447 C9orf152Q5JTZ5 239 aa7.54□□□□□ -1.2
RTF1-206ENST00000560447 GDF5OSQ5U4N7 250 aa7.54□□□□□ -1.2
RTF1-206ENST00000560447 TCF24Q7RTU0 167 aa7.54□□□□□ -1.2
RTF1-206ENST00000560447 ZC2HC1AQ96GY0 325 aa7.54□□□□□ -1.2
RTF1-206ENST00000560447 NRN1Q9NPD7 142 aa7.54□□□□□ -1.2
RTF1-206ENST00000560447 CACNA1AO00555 2505 aa7.54□□□□□ -1.2
RTF1-206ENST00000560447 SPTBN1Q01082 2364 aaKnown RBP7.53□□□□□ -1.2
RTF1-206ENST00000560447 TRAV8-1A0A0A6YYK1 113 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 TRAV41A0A0B4J266 112 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 IGHV4-61A0A0C4DH41 118 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 SH2D7A6NKC9 451 aaPredicted RBP7.53□□□□□ -1.2
RTF1-206ENST00000560447 ZNF705FA8MVS1 300 aaPredicted RBP7.53□□□□□ -1.2
RTF1-206ENST00000560447 CHEK1O14757 476 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 BUB3O43684 328 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 HSBP1O75506 76 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 SNRPCP09234 159 aaKnown RBP7.53□□□□□ -1.2
RTF1-206ENST00000560447 ZNF705DP0CH99 300 aaPredicted RBP7.53□□□□□ -1.2
RTF1-206ENST00000560447 ZNF705BP0CI00 300 aaPredicted RBP7.53□□□□□ -1.2
RTF1-206ENST00000560447 GPR183P32249 361 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 ATP5G2Q06055 141 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 ECSCRQ19T08 205 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 KIAA1644Q3SXP7 199 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 ZNF493Q6ZR52 646 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms