RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 HIST1H2BAQ96A08 127 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 GPX7Q96SL4 187 aaPredicted RBP2.17□□□□□ -2.06
LRRC28-212ENST00000558911 TTTY13Q9BZ97 58 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 SMIM3Q9BZL3 60 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 OR2H1Q9GZK4 316 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 IL36BQ9NZH7 164 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 KLK5Q9Y337 293 aaPredicted RBP2.17□□□□□ -2.06
LRRC28-212ENST00000558911 ICOSQ9Y6W8 199 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 ZNF638Q14966 1978 aaKnown RBP2.17□□□□□ -2.06
LRRC28-212ENST00000558911 FLG2Q5D862 2391 aaPredicted RBP2.17□□□□□ -2.06
LRRC28-212ENST00000558911 MYH11P35749 1972 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 MED23Q9ULK4 1368 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 TRBV24-1A0A075B6N3 115 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 TRAV38-1A0A0B4J264 116 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 A0A0B4J2C4 111 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 A0A1B0GW64 132 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 ODAMA1E959 279 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 PINLYPA6NC86 204 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 ZNF860A6NHJ4 632 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 C9JAW5 83 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 H3BMM0 161 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 TAX1BP3O14907 124 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 ZNF861PO60384 105 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 TNFSF15O95150 251 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 OR2H2O95918 312 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 TRGC2P03986 189 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 PRM2P04554 102 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 BCL2P10415 239 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 NPPCP23582 126 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 NFYBP25208 207 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 CCR2P41597 374 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 RPL27AP46776 148 aaKnown RBP2.16□□□□□ -2.06
LRRC28-212ENST00000558911 TAS2R30P59541 319 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 WHAMMP3Q1A5X7 153 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 MORN2Q502X0 79 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 RASL11AQ6T310 242 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 LRRC28Q86X40 367 aaPredicted RBP2.16□□□□□ -2.06
LRRC28-212ENST00000558911 TMEM105Q8N8V8 129 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 OR52R1Q8NGF1 315 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 OR5A1Q8NGJ0 315 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 OR51T1Q8NGJ9 327 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 UBE2WQ96B02 151 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 ZC2HC1AQ96GY0 325 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 RNF5Q99942 180 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 SLC25A21Q9BQT8 299 aaPredicted RBP2.16□□□□□ -2.06
LRRC28-212ENST00000558911 UPK3BQ9BT76 320 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 DERL1Q9BUN8 251 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 CKLFQ9UBR5 152 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 LAMTOR3Q9UHA4 124 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 HIGD1AQ9Y241 93 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 LAMTOR2Q9Y2Q5 125 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 TRAPPC1Q9Y5R8 145 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 U3KQ87 197 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 CROCCQ5TZA2 2017 aa2.16□□□□□ -2.06
LRRC28-212ENST00000558911 ABCA7Q8IZY2 2146 aa2.15□□□□□ -2.06
LRRC28-212ENST00000558911 IGKV1OR2-108A0A075B7D4 117 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 A0A096LPI6 279 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 A8MWP6 167 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 OVOL1O14753 267 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 OR2T1O43869 369 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 SH2D1AO60880 128 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 SMIM24O75264 130 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 PGLYRP1O75594 196 aaPredicted RBP2.15□□□□□ -2.07
LRRC28-212ENST00000558911 LHBP01229 141 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 CCL3P10147 92 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 SLC25A16P16260 332 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 CRHBPP24387 322 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 S100A4P26447 101 aaKnown RBP2.15□□□□□ -2.07
LRRC28-212ENST00000558911 FKBP2P26885 142 aaKnown RBP2.15□□□□□ -2.07
LRRC28-212ENST00000558911 HLA-DMBP28068 263 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 TAS2R20P59543 309 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 PSG9Q00887 426 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 MEF2BQ02080 365 aaPredicted RBP2.15□□□□□ -2.07
LRRC28-212ENST00000558911 HIST1H1AQ02539 215 aaPredicted RBP2.15□□□□□ -2.07
LRRC28-212ENST00000558911 PLCXD2Q0VAA5 305 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 NEDD8Q15843 81 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 RTL8BQ17RB0 113 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 RRN3P1Q2M238 152 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 ZNF767PQ75MW2 155 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 PRR15Q8IV56 129 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 OR4C16Q8NGL9 310 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 FNDC9Q8TBE3 224 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 ISOC1Q96CN7 298 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 SLAMF6Q96DU3 332 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 RTL8AQ9BWD3 113 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 AICDAQ9GZX7 198 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 VCXQ9H320 206 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 C11orf1Q9H5F2 150 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 OR5V1Q9UGF6 321 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 MCTS1Q9ULC4 181 aaKnown RBP2.15□□□□□ -2.07
LRRC28-212ENST00000558911 U3KQK5 164 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 FER1L6Q2WGJ9 1857 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 ABCC6O95255 1503 aa2.15□□□□□ -2.07
LRRC28-212ENST00000558911 MRC1P22897 1456 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 CSMD3Q7Z407 3707 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 COL27A1Q8IZC6 1860 aaPredicted RBP2.14□□□□□ -2.07
LRRC28-212ENST00000558911 EIF2AK4Q9P2K8 1649 aaKnown RBP2.14□□□□□ -2.07
LRRC28-212ENST00000558911 MEIKINA0A087WXM9 373 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 TRAV5A0A0B4J249 113 aa2.14□□□□□ -2.07
LRRC28-212ENST00000558911 A0A1B0GW54 56 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms