RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 A0A087X0K7 114 aa9.81□□□□□ -0.84
CHMP1A-210ENST00000551981 SMCO3A2RU48 225 aa9.81□□□□□ -0.84
CHMP1A-210ENST00000551981 WRBO00258 174 aa9.81□□□□□ -0.84
CHMP1A-210ENST00000551981 EREGO14944 169 aa9.81□□□□□ -0.84
CHMP1A-210ENST00000551981 SYNGR2O43760 224 aa9.81□□□□□ -0.84
CHMP1A-210ENST00000551981 RLN2P04090 185 aa9.81□□□□□ -0.84
CHMP1A-210ENST00000551981 ACOT7LQ6ZUV0 252 aa9.81□□□□□ -0.84
CHMP1A-210ENST00000551981 RPUSD4Q96CM3 377 aaKnown RBP9.81□□□□□ -0.84
CHMP1A-210ENST00000551981 RNF24Q9Y225 148 aa9.81□□□□□ -0.84
CHMP1A-210ENST00000551981 FAT1Q14517 4588 aa9.8□□□□□ -0.84
CHMP1A-210ENST00000551981 SNURFLB1AK76 121 aa9.8□□□□□ -0.84
CHMP1A-210ENST00000551981 OR5G3P0C626 314 aa9.8□□□□□ -0.84
CHMP1A-210ENST00000551981 HOXA5P20719 270 aa9.8□□□□□ -0.84
CHMP1A-210ENST00000551981 SPANXN5Q5MJ07 72 aa9.8□□□□□ -0.84
CHMP1A-210ENST00000551981 CYP2G1PQ6ZSU1 146 aa9.8□□□□□ -0.84
CHMP1A-210ENST00000551981 TMED4Q7Z7H5 227 aa9.8□□□□□ -0.84
CHMP1A-210ENST00000551981 LINC00612Q8N6U2 182 aa9.8□□□□□ -0.84
CHMP1A-210ENST00000551981 LRTM2Q8N967 370 aa9.8□□□□□ -0.84
CHMP1A-210ENST00000551981 PGPEP1Q9NXJ5 209 aa9.8□□□□□ -0.84
CHMP1A-210ENST00000551981 RSL24D1Q9UHA3 163 aaKnown RBP9.8□□□□□ -0.84
CHMP1A-210ENST00000551981 STRAPQ9Y3F4 350 aaKnown RBP9.8□□□□□ -0.84
CHMP1A-210ENST00000551981 VPS13BQ7Z7G8 4022 aa9.79□□□□□ -0.84
CHMP1A-210ENST00000551981 GAGE12BA1L429 117 aa9.79□□□□□ -0.84
CHMP1A-210ENST00000551981 GAGE7O76087 117 aa9.79□□□□□ -0.84
CHMP1A-210ENST00000551981 LINC00869P0C866 280 aa9.79□□□□□ -0.84
CHMP1A-210ENST00000551981 GAGE12FP0CL80 117 aa9.79□□□□□ -0.84
CHMP1A-210ENST00000551981 GAGE12GP0CL81 117 aa9.79□□□□□ -0.84
CHMP1A-210ENST00000551981 GAGE12IP0CL82 117 aa9.79□□□□□ -0.84
CHMP1A-210ENST00000551981 VAMP1P23763 118 aa9.79□□□□□ -0.84
CHMP1A-210ENST00000551981 LINC00315P59091 139 aa9.79□□□□□ -0.84
CHMP1A-210ENST00000551981 SELENOTP62341 195 aa9.79□□□□□ -0.84
CHMP1A-210ENST00000551981 TMEM128Q5BJH2 165 aa9.79□□□□□ -0.84
CHMP1A-210ENST00000551981 MYCBP2O75592 4640 aa9.79□□□□□ -0.84
CHMP1A-210ENST00000551981 H3BP45 60 aa9.78□□□□□ -0.84
CHMP1A-210ENST00000551981 CXCL2P19875 107 aa9.78□□□□□ -0.84
CHMP1A-210ENST00000551981 ANXA7P20073 488 aaKnown RBP9.78□□□□□ -0.84
CHMP1A-210ENST00000551981 FAUP35544 74 aaKnown RBP9.78□□□□□ -0.84
CHMP1A-210ENST00000551981 PLP1P60201 277 aa9.78□□□□□ -0.84
CHMP1A-210ENST00000551981 ERVFC1-1P60608 527 aa9.78□□□□□ -0.84
CHMP1A-210ENST00000551981 CDPF1Q6NVV7 123 aa9.78□□□□□ -0.84
CHMP1A-210ENST00000551981 LCN15Q6UWW0 184 aa9.78□□□□□ -0.84
CHMP1A-210ENST00000551981 LYPD1Q8N2G4 141 aa9.77□□□□□ -0.85
CHMP1A-210ENST00000551981 FRZBQ92765 325 aa9.77□□□□□ -0.85
CHMP1A-210ENST00000551981 PMS2P5A8MQ11 134 aa9.76□□□□□ -0.85
CHMP1A-210ENST00000551981 PRB4P10163 310 aaPredicted RBP9.76□□□□□ -0.85
CHMP1A-210ENST00000551981 GFI1BQ5VTD9 330 aa9.76□□□□□ -0.85
CHMP1A-210ENST00000551981 CCDC190Q86UF4 302 aa9.76□□□□□ -0.85
CHMP1A-210ENST00000551981 SLC50A1Q9BRV3 221 aa9.76□□□□□ -0.85
CHMP1A-210ENST00000551981 ARL6Q9H0F7 186 aa9.76□□□□□ -0.85
CHMP1A-210ENST00000551981 TMPRSS5Q9H3S3 457 aa9.76□□□□□ -0.85
CHMP1A-210ENST00000551981 SRRM2Q9UQ35 2752 aaKnown RBP9.75□□□□□ -0.85
CHMP1A-210ENST00000551981 SIVA1O15304 175 aa9.75□□□□□ -0.85
CHMP1A-210ENST00000551981 HOXB5P09067 269 aa9.75□□□□□ -0.85
CHMP1A-210ENST00000551981 DAZ2Q13117 558 aaKnown RBP9.75□□□□□ -0.85
CHMP1A-210ENST00000551981 KIR3DS1Q14943 382 aa9.75□□□□□ -0.85
CHMP1A-210ENST00000551981 SPCS2Q15005 226 aa9.75□□□□□ -0.85
CHMP1A-210ENST00000551981 PXDC1Q5TGL8 231 aa9.75□□□□□ -0.85
CHMP1A-210ENST00000551981 Q5VSD8 79 aa9.75□□□□□ -0.85
CHMP1A-210ENST00000551981 Q6ZRN7 208 aaPredicted RBP9.75□□□□□ -0.85
CHMP1A-210ENST00000551981 ARV1Q9H2C2 271 aa9.75□□□□□ -0.85
CHMP1A-210ENST00000551981 ZNF331Q9NQX6 463 aaPredicted RBP9.75□□□□□ -0.85
CHMP1A-210ENST00000551981 TRGV2A0A075B6R0 118 aa9.74□□□□□ -0.85
CHMP1A-210ENST00000551981 A0A096LPF7 62 aa9.74□□□□□ -0.85
CHMP1A-210ENST00000551981 MRPS12O15235 138 aaKnown RBP9.74□□□□□ -0.85
CHMP1A-210ENST00000551981 SFT2D2O95562 160 aa9.74□□□□□ -0.85
CHMP1A-210ENST00000551981 IFNA5P01569 189 aa9.74□□□□□ -0.85
CHMP1A-210ENST00000551981 LEPP41159 167 aa9.74□□□□□ -0.85
CHMP1A-210ENST00000551981 AP3S2P59780 193 aa9.74□□□□□ -0.85
CHMP1A-210ENST00000551981 PYGO2Q9BRQ0 406 aa9.74□□□□□ -0.85
CHMP1A-210ENST00000551981 PARD6GQ9BYG4 376 aaPredicted RBP9.74□□□□□ -0.85
CHMP1A-210ENST00000551981 NPVFQ9HCQ7 196 aa9.74□□□□□ -0.85
CHMP1A-210ENST00000551981 PSENENQ9NZ42 101 aa9.74□□□□□ -0.85
CHMP1A-210ENST00000551981 CCDC59Q9P031 241 aaKnown RBP9.74□□□□□ -0.85
CHMP1A-210ENST00000551981 TRAV12-3A0A0B4J271 114 aa9.73□□□□□ -0.85
CHMP1A-210ENST00000551981 FABP12A6NFH5 140 aa9.73□□□□□ -0.85
CHMP1A-210ENST00000551981 K7EPK0 472 aa9.73□□□□□ -0.85
CHMP1A-210ENST00000551981 SMIM18P0DKX4 95 aa9.73□□□□□ -0.85
CHMP1A-210ENST00000551981 XGP55808 180 aa9.73□□□□□ -0.85
CHMP1A-210ENST00000551981 PPP1R1AQ13522 171 aa9.73□□□□□ -0.85
CHMP1A-210ENST00000551981 TEPPQ6URK8 271 aa9.73□□□□□ -0.85
CHMP1A-210ENST00000551981 Q6ZTI0 123 aa9.73□□□□□ -0.85
CHMP1A-210ENST00000551981 LINC00305Q7Z4B0 112 aa9.73□□□□□ -0.85
CHMP1A-210ENST00000551981 NFE4Q86UQ8 179 aa9.73□□□□□ -0.85
CHMP1A-210ENST00000551981 BPIFA4PQ86YQ2 179 aa9.73□□□□□ -0.85
CHMP1A-210ENST00000551981 VSIG2Q96IQ7 327 aa9.73□□□□□ -0.85
CHMP1A-210ENST00000551981 SLC25A21Q9BQT8 299 aaPredicted RBP9.73□□□□□ -0.85
CHMP1A-210ENST00000551981 MGAT4CQ9UBM8 478 aa9.73□□□□□ -0.85
CHMP1A-210ENST00000551981 PRAC2D3DTV9 90 aa9.72□□□□□ -0.85
CHMP1A-210ENST00000551981 FNDC10F2Z333 226 aa9.72□□□□□ -0.85
CHMP1A-210ENST00000551981 J3KRW8 73 aa9.72□□□□□ -0.85
CHMP1A-210ENST00000551981 RRAS2P62070 204 aaPredicted RBP9.72□□□□□ -0.85
CHMP1A-210ENST00000551981 POLR2GP62487 172 aaKnown RBP eCLIP9.72□□□□□ -0.85
CHMP1A-210ENST00000551981 ID3Q02535 119 aa9.72□□□□□ -0.85
CHMP1A-210ENST00000551981 PATE2Q6UY27 113 aa9.72□□□□□ -0.85
CHMP1A-210ENST00000551981 ZNF546Q86UE3 836 aa9.72□□□□□ -0.85
CHMP1A-210ENST00000551981 ZNF680Q8NEM1 530 aa9.72□□□□□ -0.85
CHMP1A-210ENST00000551981 ODF3Q96PU9 254 aa9.72□□□□□ -0.85
CHMP1A-210ENST00000551981 PXMP4Q9Y6I8 212 aa9.72□□□□□ -0.85
CHMP1A-210ENST00000551981 GOSR2O14653 212 aa9.71□□□□□ -0.86
CHMP1A-210ENST00000551981 SSSCA1O60232 199 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms