RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 ALKAL1Q6UXT8 129 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 C20orf196Q8IYI0 205 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 HIST3H2BBQ8N257 126 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 ANKRD29Q8N6D5 301 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 SIGLECL1Q8N7X8 197 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 SLC35B4Q969S0 331 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 TOMM6Q96B49 74 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 NIPSNAP1Q9BPW8 284 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 MRPS26Q9BYN8 205 aaKnown RBP0.35□□□□□ -2.35
CCDC38-206ENST00000548771 CDC42SE1Q9NRR8 79 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 ERGIC3Q9Y282 383 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 ATP6V1DQ9Y5K8 247 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 ZFYVE9O95405 1425 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 TROQ12816 1431 aaPredicted RBP0.35□□□□□ -2.35
CCDC38-206ENST00000548771 IQGAP2Q13576 1575 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 APCP25054 2843 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 MXRA5Q9NR99 2828 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 XRN1Q8IZH2 1706 aaKnown RBP0.35□□□□□ -2.35
CCDC38-206ENST00000548771 MYO5CQ9NQX4 1742 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 NWD2Q9ULI1 1742 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 CRYBG1Q9Y4K1 1723 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 EP300Q09472 2414 aaPredicted RBP0.35□□□□□ -2.35
CCDC38-206ENST00000548771 ADGRL2O95490 1459 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 ATP7BP35670 1465 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 ERVK-7P63135 1459 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 ZNF518AQ6AHZ1 1483 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 PIK3C2BO00750 1634 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 PTPN23Q9H3S7 1636 aa0.35□□□□□ -2.35
CCDC38-206ENST00000548771 EIF2AK4Q9P2K8 1649 aaKnown RBP0.35□□□□□ -2.35
CCDC38-206ENST00000548771 ANKHD1Q8IWZ3 2542 aaKnown RBP0.34□□□□□ -2.35
CCDC38-206ENST00000548771 MAP1AP78559 2803 aaPredicted RBP0.34□□□□□ -2.35
CCDC38-206ENST00000548771 USP54Q70EL1 1684 aa0.34□□□□□ -2.35
CCDC38-206ENST00000548771 MUC12Q9UKN1 5478 aa0.34□□□□□ -2.35
CCDC38-206ENST00000548771 USH2AO75445 5202 aa0.34□□□□□ -2.35
CCDC38-206ENST00000548771 CENPEQ02224 2701 aa0.34□□□□□ -2.35
CCDC38-206ENST00000548771 NCR3O14931 201 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 TGOLN2O43493 480 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 LYZL6O75951 148 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 SPCS3P61009 180 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 PSME3P61289 254 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 SNRPD2P62316 118 aaKnown RBP0.34□□□□□ -2.36
CCDC38-206ENST00000548771 QSER1Q2KHR3 1735 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 SAMD9Q5K651 1589 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 SMG6Q86US8 1419 aaKnown RBP0.34□□□□□ -2.36
CCDC38-206ENST00000548771 TIAM2Q8IVF5 1701 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 DNAH3Q8TD57 4116 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 PATE1Q8WXA2 126 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 OR52E6Q96RD3 313 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 ERBINQ96RT1 1412 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 SLC35A3Q9Y2D2 325 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 NCOA3Q9Y6Q9 1424 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 F8P00451 2351 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 PLEKHH2Q8IVE3 1493 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 MACF1Q9UPN3 7388 aaKnown RBP0.34□□□□□ -2.36
CCDC38-206ENST00000548771 CREBBPQ92793 2442 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 FAT2Q9NYQ8 4349 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 HSPG2P98160 4391 aa0.34□□□□□ -2.36
CCDC38-206ENST00000548771 NHSQ6T4R5 1651 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 CTTNBP2Q8WZ74 1663 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 PTPRQQ9UMZ3 2332 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 SYCP2Q9BX26 1530 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 TLN2Q9Y4G6 2542 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 PARP4Q9UKK3 1724 aaKnown RBP0.33□□□□□ -2.36
CCDC38-206ENST00000548771 ANKRD26Q9UPS8 1709 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 CFAP74Q9C0B2 1584 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 INO80Q9ULG1 1556 aaPredicted RBP0.33□□□□□ -2.36
CCDC38-206ENST00000548771 BCL9O00512 1426 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 CASKIN1Q8WXD9 1431 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 KDM3BQ7LBC6 1761 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 TGIF2-C20orf24A0A0A6YYL0 155 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 TRAV3A0A0B4J244 114 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 TRAV12-1A0A0B4J245 112 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 EXOC1LA0A1B0GW35 172 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 CCDC160A6NGH7 325 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 BUB1B-PAK6H3BSN5 160 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 FAAHO00519 579 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 CRYZL1O95825 349 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 CD79AP11912 226 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 S100A4P26447 101 aaKnown RBP0.33□□□□□ -2.36
CCDC38-206ENST00000548771 DEFA1P59665 94 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 MPV17LQ2QL34 196 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 KRTAP21-1Q3LI58 79 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 C1orf137Q5JT78 98 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 SPOPLQ6IQ16 392 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 C8orf74Q6P047 294 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 SPATA8Q6RVD6 105 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 TRAPPC6BQ86SZ2 158 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 C4orf3Q8WVX3 66 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 PTH2Q96A98 100 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 GPR146Q96CH1 333 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 PPP1R2P1Q96PQ5 205 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 LLPHQ9BRT6 129 aaKnown RBP0.33□□□□□ -2.36
CCDC38-206ENST00000548771 OSTCQ9NRP0 149 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 PKIGQ9Y2B9 76 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 ALMS1Q8TCU4 4167 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 HUWE1Q7Z6Z7 4374 aaKnown RBP0.33□□□□□ -2.36
CCDC38-206ENST00000548771 TNRC6AQ8NDV7 1962 aaKnown RBP0.33□□□□□ -2.36
CCDC38-206ENST00000548771 BTAF1O14981 1849 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 ARFGEF1Q9Y6D6 1849 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 DNAH9Q9NYC9 4486 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms