RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 PMS2P5A8MQ11 134 aa8.93□□□□□ -0.98
PBX1-212ENST00000540236 MEOX1P50221 254 aa8.93□□□□□ -0.98
PBX1-212ENST00000540236 NUP37Q8NFH4 326 aa8.93□□□□□ -0.98
PBX1-212ENST00000540236 PCNX3Q9H6A9 2034 aa8.92□□□□□ -0.98
PBX1-212ENST00000540236 ARHGEF17Q96PE2 2063 aaPredicted RBP8.92□□□□□ -0.98
PBX1-212ENST00000540236 FGF6P10767 208 aa8.92□□□□□ -0.98
PBX1-212ENST00000540236 RPL27AP46776 148 aaKnown RBP8.92□□□□□ -0.98
PBX1-212ENST00000540236 Q86TA4 180 aa8.92□□□□□ -0.98
PBX1-212ENST00000540236 MRPS17Q9Y2R5 130 aaKnown RBP8.92□□□□□ -0.98
PBX1-212ENST00000540236 DNAH12Q6ZR08 3092 aa8.92□□□□□ -0.98
PBX1-212ENST00000540236 TRAV4A0A0B4J268 109 aa8.92□□□□□ -0.98
PBX1-212ENST00000540236 CCL17Q92583 94 aa8.92□□□□□ -0.98
PBX1-212ENST00000540236 C17orf77Q96MU5 243 aa8.92□□□□□ -0.98
PBX1-212ENST00000540236 LINC00322Q6ZN03 302 aaPredicted RBP8.92□□□□□ -0.98
PBX1-212ENST00000540236 TM2D2Q9BX73 214 aa8.92□□□□□ -0.98
PBX1-212ENST00000540236 NUP210Q8TEM1 1887 aaPredicted RBP8.92□□□□□ -0.98
PBX1-212ENST00000540236 TCL1BO95988 128 aa8.92□□□□□ -0.98
PBX1-212ENST00000540236 TRACP01848 142 aa8.92□□□□□ -0.98
PBX1-212ENST00000540236 KLHL30-AS1Q8NEE0 82 aa8.92□□□□□ -0.98
PBX1-212ENST00000540236 IGKV3D-11A0A0A0MRZ8 115 aa8.91□□□□□ -0.98
PBX1-212ENST00000540236 TMEM75Q8N9X5 138 aa8.91□□□□□ -0.98
PBX1-212ENST00000540236 VPREB3Q9UKI3 123 aa8.91□□□□□ -0.98
PBX1-212ENST00000540236 A0A0U1RQV1 116 aa8.91□□□□□ -0.98
PBX1-212ENST00000540236 ZNF625Q96I27 306 aaPredicted RBP8.91□□□□□ -0.98
PBX1-212ENST00000540236 FAM110AQ9BQ89 295 aa8.91□□□□□ -0.98
PBX1-212ENST00000540236 FGF23Q9GZV9 251 aaPredicted RBP8.91□□□□□ -0.98
PBX1-212ENST00000540236 MYO7BQ6PIF6 2116 aa8.91□□□□□ -0.98
PBX1-212ENST00000540236 A4D1N5 150 aa8.91□□□□□ -0.98
PBX1-212ENST00000540236 HAX1O00165 279 aa8.91□□□□□ -0.98
PBX1-212ENST00000540236 CEACAM4O75871 244 aa8.91□□□□□ -0.98
PBX1-212ENST00000540236 DUX4L9Q6RFH8 374 aaPredicted RBP8.91□□□□□ -0.98
PBX1-212ENST00000540236 SLC25A48Q6ZT89 311 aaKnown RBP8.91□□□□□ -0.98
PBX1-212ENST00000540236 OTORQ9NRC9 128 aa8.91□□□□□ -0.98
PBX1-212ENST00000540236 ADARB2-AS1A8MUL3 147 aa8.91□□□□□ -0.98
PBX1-212ENST00000540236 KLF14Q8TD94 323 aaPredicted RBP8.91□□□□□ -0.98
PBX1-212ENST00000540236 WIPF2Q8TF74 440 aaPredicted RBP8.91□□□□□ -0.98
PBX1-212ENST00000540236 CHCHD2Q9Y6H1 151 aaPredicted RBP8.91□□□□□ -0.98
PBX1-212ENST00000540236 ITLN1Q8WWA0 313 aa8.9□□□□□ -0.98
PBX1-212ENST00000540236 DUX5Q96PT3 197 aa8.9□□□□□ -0.98
PBX1-212ENST00000540236 IGLV2-8P01709 118 aa8.9□□□□□ -0.98
PBX1-212ENST00000540236 MAPKAPK5-AS1Q8N8E1 139 aa8.9□□□□□ -0.98
PBX1-212ENST00000540236 S100A7L2Q5SY68 101 aa8.9□□□□□ -0.98
PBX1-212ENST00000540236 URB1-AS1Q96HZ7 61 aa8.9□□□□□ -0.98
PBX1-212ENST00000540236 CD69Q07108 199 aa8.9□□□□□ -0.99
PBX1-212ENST00000540236 Q6AWC8 147 aa8.9□□□□□ -0.99
PBX1-212ENST00000540236 LTBP4Q8N2S1 1624 aa8.9□□□□□ -0.99
PBX1-212ENST00000540236 NXPH1P58417 271 aa8.9□□□□□ -0.99
PBX1-212ENST00000540236 SRSF1Q07955 248 aaKnown RBP eCLIP8.9□□□□□ -0.99
PBX1-212ENST00000540236 ZNF474Q6S9Z5 364 aaPredicted RBP8.9□□□□□ -0.99
PBX1-212ENST00000540236 C11orf52Q96A22 123 aa8.9□□□□□ -0.99
PBX1-212ENST00000540236 AJUBAQ96IF1 538 aa8.9□□□□□ -0.99
PBX1-212ENST00000540236 SCNM1Q9BWG6 230 aa8.9□□□□□ -0.99
PBX1-212ENST00000540236 KLK5Q9Y337 293 aaPredicted RBP8.9□□□□□ -0.99
PBX1-212ENST00000540236 IGKV1-16P04430 117 aa8.89□□□□□ -0.99
PBX1-212ENST00000540236 LINC00271P0C7V0 271 aa8.89□□□□□ -0.99
PBX1-212ENST00000540236 TANC2Q9HCD6 1990 aa8.89□□□□□ -0.99
PBX1-212ENST00000540236 H7C1H1 209 aa8.89□□□□□ -0.99
PBX1-212ENST00000540236 UPK2O00526 184 aa8.89□□□□□ -0.99
PBX1-212ENST00000540236 NDPQ00604 133 aa8.89□□□□□ -0.99
PBX1-212ENST00000540236 DIAPH2-AS1Q14236 149 aa8.89□□□□□ -0.99
PBX1-212ENST00000540236 TEX49A0A1B0GTD5 131 aa8.89□□□□□ -0.99
PBX1-212ENST00000540236 LILRA5A6NI73 299 aa8.89□□□□□ -0.99
PBX1-212ENST00000540236 TMEM133Q9H2Q1 129 aa8.89□□□□□ -0.99
PBX1-212ENST00000540236 LINC00527Q9UJ94 153 aa8.89□□□□□ -0.99
PBX1-212ENST00000540236 THSD7AQ9UPZ6 1657 aa8.88□□□□□ -0.99
PBX1-212ENST00000540236 EEF1AKMT3Q96AZ1 226 aa8.88□□□□□ -0.99
PBX1-212ENST00000540236 DYNLRB1Q9NP97 96 aa8.88□□□□□ -0.99
PBX1-212ENST00000540236 ZNF503-AS2A6NEH8 195 aa8.88□□□□□ -0.99
PBX1-212ENST00000540236 PMS2CLQ68D20 193 aa8.88□□□□□ -0.99
PBX1-212ENST00000540236 KNL1Q8NG31 2342 aa8.88□□□□□ -0.99
PBX1-212ENST00000540236 TNFAIP6P98066 277 aaPredicted RBP8.88□□□□□ -0.99
PBX1-212ENST00000540236 CIRBPQ14011 172 aaKnown RBP8.88□□□□□ -0.99
PBX1-212ENST00000540236 TMEM42Q69YG0 159 aa8.88□□□□□ -0.99
PBX1-212ENST00000540236 PRADC1Q9BSG0 188 aa8.88□□□□□ -0.99
PBX1-212ENST00000540236 CD7P09564 240 aa8.88□□□□□ -0.99
PBX1-212ENST00000540236 SMPXQ9UHP9 88 aa8.88□□□□□ -0.99
PBX1-212ENST00000540236 OOSP1A8MZH6 123 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 FAM104BQ5XKR9 115 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 NFE4Q86UQ8 179 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 FAM57AQ8TBR7 257 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 FXYD5Q96DB9 178 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 MSRB1Q9NZV6 116 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 PHLDA3Q9Y5J5 127 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 CCL4P13236 92 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 NFAM1Q8NET5 270 aaPredicted RBP8.87□□□□□ -0.99
PBX1-212ENST00000540236 RAB1BQ9H0U4 201 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 J3KT08 172 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 CCL11P51671 97 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 CD177Q8N6Q3 437 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 ZNF503Q96F45 646 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 CSDC2Q9Y534 153 aaKnown RBP8.87□□□□□ -0.99
PBX1-212ENST00000540236 PI4KAP42356 2102 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 PRCDQ00LT1 54 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 TEN1Q86WV5 123 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 ESPL1Q14674 2120 aa8.87□□□□□ -0.99
PBX1-212ENST00000540236 IL17RELQ6ZVW7 336 aa8.86□□□□□ -0.99
PBX1-212ENST00000540236 MRPS21P82921 87 aaKnown RBP8.86□□□□□ -0.99
PBX1-212ENST00000540236 FAM216BQ8N7L0 139 aa8.86□□□□□ -0.99
PBX1-212ENST00000540236 MBD6Q96DN6 1003 aa8.86□□□□□ -0.99
PBX1-212ENST00000540236 IGHV1-45A0A0A0MS14 117 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms