RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 CDPF1Q6NVV7 123 aa7.96□□□□□ -1.14
MRPS28-206ENST00000520946 CYP2G1PQ6ZSU1 146 aa7.96□□□□□ -1.14
MRPS28-206ENST00000520946 LYPD1Q8N2G4 141 aa7.96□□□□□ -1.14
MRPS28-206ENST00000520946 RNASE8Q8TDE3 154 aaKnown RBP7.96□□□□□ -1.14
MRPS28-206ENST00000520946 DIRAS2Q96HU8 199 aa7.96□□□□□ -1.14
MRPS28-206ENST00000520946 C20orf144Q9BQM9 153 aa7.96□□□□□ -1.14
MRPS28-206ENST00000520946 SHANK2-AS3Q9BTD1 123 aa7.96□□□□□ -1.14
MRPS28-206ENST00000520946 RABL2AQ9UBK7 228 aaPredicted RBP7.96□□□□□ -1.14
MRPS28-206ENST00000520946 RABL2BQ9UNT1 228 aa7.96□□□□□ -1.14
MRPS28-206ENST00000520946 STRAPQ9Y3F4 350 aaKnown RBP7.96□□□□□ -1.14
MRPS28-206ENST00000520946 DUXBA0A1W2PPF3 345 aa7.95□□□□□ -1.14
MRPS28-206ENST00000520946 H3BRN7 92 aa7.95□□□□□ -1.14
MRPS28-206ENST00000520946 J3KRW8 73 aa7.95□□□□□ -1.14
MRPS28-206ENST00000520946 SIVA1O15304 175 aa7.95□□□□□ -1.14
MRPS28-206ENST00000520946 SYNGR2O43760 224 aa7.95□□□□□ -1.14
MRPS28-206ENST00000520946 LINC00869P0C866 280 aa7.95□□□□□ -1.14
MRPS28-206ENST00000520946 PRB4P10163 310 aaPredicted RBP7.95□□□□□ -1.14
MRPS28-206ENST00000520946 HSPG2P98160 4391 aa7.95□□□□□ -1.14
MRPS28-206ENST00000520946 TRAV9-2A0A087WT02 112 aa7.94□□□□□ -1.14
MRPS28-206ENST00000520946 FAM229AH3BQW9 127 aa7.94□□□□□ -1.14
MRPS28-206ENST00000520946 FAUP35544 74 aaKnown RBP7.94□□□□□ -1.14
MRPS28-206ENST00000520946 TMEM182Q6ZP80 229 aaPredicted RBP7.94□□□□□ -1.14
MRPS28-206ENST00000520946 ACOT7LQ6ZUV0 252 aa7.94□□□□□ -1.14
MRPS28-206ENST00000520946 NFE4Q86UQ8 179 aa7.94□□□□□ -1.14
MRPS28-206ENST00000520946 C17orf77Q96MU5 243 aa7.94□□□□□ -1.14
MRPS28-206ENST00000520946 H3BP45 60 aa7.93□□□□□ -1.14
MRPS28-206ENST00000520946 J3QL48 77 aa7.93□□□□□ -1.14
MRPS28-206ENST00000520946 CTDSP2O14595 271 aa7.93□□□□□ -1.14
MRPS28-206ENST00000520946 CTDSPLO15194 276 aa7.93□□□□□ -1.14
MRPS28-206ENST00000520946 SLC25A6P12236 298 aa7.93□□□□□ -1.14
MRPS28-206ENST00000520946 HOXA5P20719 270 aa7.93□□□□□ -1.14
MRPS28-206ENST00000520946 FUSP35637 526 aaKnown RBP eCLIP7.93□□□□□ -1.14
MRPS28-206ENST00000520946 LEPP41159 167 aa7.93□□□□□ -1.14
MRPS28-206ENST00000520946 SELENOTP62341 195 aa7.93□□□□□ -1.14
MRPS28-206ENST00000520946 TMEM128Q5BJH2 165 aa7.93□□□□□ -1.14
MRPS28-206ENST00000520946 LCN15Q6UWW0 184 aa7.93□□□□□ -1.14
MRPS28-206ENST00000520946 SLC50A1Q9BRV3 221 aa7.93□□□□□ -1.14
MRPS28-206ENST00000520946 ARL6Q9H0F7 186 aa7.93□□□□□ -1.14
MRPS28-206ENST00000520946 TMPRSS5Q9H3S3 457 aa7.93□□□□□ -1.14
MRPS28-206ENST00000520946 RSL24D1Q9UHA3 163 aaKnown RBP7.93□□□□□ -1.14
MRPS28-206ENST00000520946 A0A087X0K7 114 aa7.92□□□□□ -1.14
MRPS28-206ENST00000520946 ANKRD20A5PA0PJZ0 165 aa7.92□□□□□ -1.14
MRPS28-206ENST00000520946 PMS2P5A8MQ11 134 aa7.92□□□□□ -1.14
MRPS28-206ENST00000520946 PITX3O75364 302 aa7.92□□□□□ -1.14
MRPS28-206ENST00000520946 HOXB5P09067 269 aa7.92□□□□□ -1.14
MRPS28-206ENST00000520946 NAA50Q9GZZ1 169 aaKnown RBP7.92□□□□□ -1.14
MRPS28-206ENST00000520946 MIXL1Q9H2W2 232 aa7.92□□□□□ -1.14
MRPS28-206ENST00000520946 PSENENQ9NZ42 101 aa7.92□□□□□ -1.14
MRPS28-206ENST00000520946 DMBT1Q9UGM3 2413 aaPredicted RBP7.91□□□□□ -1.14
MRPS28-206ENST00000520946 A0A096LPF7 62 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 TRGV1A0A0A0MS02 117 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 TRAV12-3A0A0B4J271 114 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 GOSR2O14653 212 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 PAX4O43316 350 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 NXPH4O95158 308 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 SMR3BP02814 79 aaPredicted RBP7.91□□□□□ -1.14
MRPS28-206ENST00000520946 SNRPCP09234 159 aaKnown RBP7.91□□□□□ -1.14
MRPS28-206ENST00000520946 CXCL2P19875 107 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 RRAS2P62070 204 aaPredicted RBP7.91□□□□□ -1.14
MRPS28-206ENST00000520946 ICAM4Q14773 271 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 CTF1Q16619 201 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 GFI1BQ5VTD9 330 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 BPIFA4PQ86YQ2 179 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 LINC00612Q8N6U2 182 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 ZBTB8BQ8NAP8 495 aaPredicted RBP7.91□□□□□ -1.14
MRPS28-206ENST00000520946 C18orf15Q96N68 181 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 PYGO2Q9BRQ0 406 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 PARD6GQ9BYG4 376 aaPredicted RBP7.91□□□□□ -1.14
MRPS28-206ENST00000520946 ARV1Q9H2C2 271 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 MGAT4CQ9UBM8 478 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 ICOSQ9Y6W8 199 aa7.91□□□□□ -1.14
MRPS28-206ENST00000520946 XGP55808 180 aa7.9□□□□□ -1.14
MRPS28-206ENST00000520946 AP3S2P59780 193 aa7.9□□□□□ -1.14
MRPS28-206ENST00000520946 DAZ2Q13117 558 aaKnown RBP7.9□□□□□ -1.14
MRPS28-206ENST00000520946 KIR3DS1Q14943 382 aa7.9□□□□□ -1.14
MRPS28-206ENST00000520946 Q6ZTI0 123 aa7.9□□□□□ -1.14
MRPS28-206ENST00000520946 LINC00305Q7Z4B0 112 aa7.9□□□□□ -1.14
MRPS28-206ENST00000520946 ZNF680Q8NEM1 530 aa7.9□□□□□ -1.14
MRPS28-206ENST00000520946 NPVFQ9HCQ7 196 aa7.9□□□□□ -1.14
MRPS28-206ENST00000520946 MDFICQ9P1T7 246 aa7.9□□□□□ -1.14
MRPS28-206ENST00000520946 PXMP4Q9Y6I8 212 aa7.9□□□□□ -1.14
MRPS28-206ENST00000520946 FABP12A6NFH5 140 aa7.89□□□□□ -1.15
MRPS28-206ENST00000520946 PRSS46E5RG02 174 aa7.89□□□□□ -1.15
MRPS28-206ENST00000520946 COX7A2P2O60397 106 aa7.89□□□□□ -1.15
MRPS28-206ENST00000520946 GCSHP23434 173 aa7.89□□□□□ -1.15
MRPS28-206ENST00000520946 PLP1P60201 277 aa7.89□□□□□ -1.15
MRPS28-206ENST00000520946 PXDC1Q5TGL8 231 aa7.89□□□□□ -1.15
MRPS28-206ENST00000520946 TEPPQ6URK8 271 aa7.89□□□□□ -1.15
MRPS28-206ENST00000520946 OR10P1Q8NGE3 313 aa7.89□□□□□ -1.15
MRPS28-206ENST00000520946 MCFD2Q8NI22 146 aa7.89□□□□□ -1.15
MRPS28-206ENST00000520946 ZNF331Q9NQX6 463 aaPredicted RBP7.89□□□□□ -1.15
MRPS28-206ENST00000520946 GSN-AS1Q9NRJ2 163 aa7.89□□□□□ -1.15
MRPS28-206ENST00000520946 CCDC59Q9P031 241 aaKnown RBP7.89□□□□□ -1.15
MRPS28-206ENST00000520946 FUT9Q9Y231 359 aa7.89□□□□□ -1.15
MRPS28-206ENST00000520946 LY96Q9Y6Y9 160 aa7.89□□□□□ -1.15
MRPS28-206ENST00000520946 H3BTX0 84 aa7.88□□□□□ -1.15
MRPS28-206ENST00000520946 SSSCA1O60232 199 aa7.88□□□□□ -1.15
MRPS28-206ENST00000520946 SFT2D2O95562 160 aa7.88□□□□□ -1.15
MRPS28-206ENST00000520946 SLAQ13239 276 aa7.88□□□□□ -1.15
MRPS28-206ENST00000520946 Q6ZRN7 208 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms