RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, human

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1-208	ENST00000512392	ZNF322	Q6U7Q0	402 aa	Predicted RBP	4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	HHLA3	Q9XRX5	114 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	ZNF646	O15015	1829 aa	Predicted RBP	4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	CLIP1	P30622	1438 aa		4.18	□□□□□ -1.74
CHD1-208	ENST00000512392	SIPA1L1	O43166	1804 aa		4.17	□□□□□ -1.74
CHD1-208	ENST00000512392		A0A1W2PP18	115 aa		4.17	□□□□□ -1.74
CHD1-208	ENST00000512392	NMB	P08949	121 aa		4.17	□□□□□ -1.74
CHD1-208	ENST00000512392	CFC1	P0CG37	223 aa		4.17	□□□□□ -1.74
CHD1-208	ENST00000512392	FABP4	P15090	132 aa		4.17	□□□□□ -1.74
CHD1-208	ENST00000512392	ETV6	P41212	452 aa		4.17	□□□□□ -1.74
CHD1-208	ENST00000512392	AKR1C1	Q04828	323 aa		4.17	□□□□□ -1.74
CHD1-208	ENST00000512392	PEA15	Q15121	130 aa		4.17	□□□□□ -1.74
CHD1-208	ENST00000512392	SVIL	O95425	2214 aa		4.17	□□□□□ -1.74
CHD1-208	ENST00000512392	IGHV1-3	A0A0C4DH29	117 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	RBAKDN	A6NC62	111 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	FXYD7	P58549	80 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	CIRBP	Q14011	172 aa	Known RBP	4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	ALKAL2	Q6UX46	152 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	C2orf91	Q6ZV80	131 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	OR5AS1	Q8N127	324 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	FAM216B	Q8N7L0	139 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	LINC01560	Q8TB33	94 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	SAR1A	Q9NR31	198 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	TRPM1	Q7Z4N2	1603 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	RPRD2	Q5VT52	1461 aa	Known RBP	4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	ADAMTS12	P58397	1594 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	IGKV1OR2-108	A0A075B7D4	117 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	TRAV1-1	A0A0B4J248	108 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	IGHV1-46	P01743	117 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	DEFA4	P12838	97 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	RPL28	P46779	137 aa	Known RBP	4.16	□□□□□ -1.74
CHD1-208	ENST00000512392		Q0VG73	95 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	OR2T2	Q6IF00	324 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	SDIM1	Q6ZPB5	146 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	C9orf106	Q8NAJ2	232 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	C1orf64	Q8NEQ6	169 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	COPS9	Q8WXC6	57 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	PSMF1	Q92530	271 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	MRPS24	Q96EL2	167 aa	Known RBP	4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	MCEE	Q96PE7	176 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	ERVK-7	P63135	1459 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	SPHKAP	Q2M3C7	1700 aa		4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4.16	□□□□□ -1.74
CHD1-208	ENST00000512392	PLXNB1	O43157	2135 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	CCDC88B	A6NC98	1476 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	MAGI2	Q86UL8	1455 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392		A6NN06	94 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392		A8MUU9	505 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	SHBG	P04278	402 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	GYPB	P06028	91 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	LINC00032	P0C843	101 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	TRAPPC2	P0DI81	140 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	TRAPPC2B	P0DI82	140 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	SNCA	P37840	140 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	IL17A	Q16552	155 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	IQCJ	Q1A5X6	159 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	KHDC3L	Q587J8	217 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	SPRN	Q5BIV9	151 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	SMCR5	Q8TEV8	140 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	AQP3	Q92482	292 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	ICOS	Q9Y6W8	199 aa		4.15	□□□□□ -1.74
CHD1-208	ENST00000512392	SMARCA4	P51532	1647 aa		4.15	□□□□□ -1.75
CHD1-208	ENST00000512392	CCDC88A	Q3V6T2	1871 aa		4.15	□□□□□ -1.75
CHD1-208	ENST00000512392	TRBV24-1	A0A075B6N3	115 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392		A0A0B4J2C4	111 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	C17orf51	A8MQB3	221 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	CCL4	P13236	92 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	NPC2	P61916	151 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	MIR7-3HG	Q8N6C7	128 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	IMMP2L	Q96T52	175 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	ASF1B	Q9NVP2	202 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	AP4S1	Q9Y587	144 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	OBSL1	O75147	1896 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	ANKRD12	Q6UB98	2062 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	RBBP6	Q7Z6E9	1792 aa	Known RBP	4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	NUP98	P52948	1817 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392		A0A0D9SG52	128 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392		B4DSR2	109 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	NDUFB6	O95139	128 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	APOC3	P02656	99 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	MIA	Q16674	131 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	AQP10	Q96PS8	301 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	RETNLB	Q9BQ08	111 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	NABP2	Q9BQ15	211 aa		4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	TDRD6	O60522	2096 aa	Known RBP	4.14	□□□□□ -1.75
CHD1-208	ENST00000512392	CROCC	Q5TZA2	2017 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	LRRIQ1	Q96JM4	1722 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	TIMM17B	O60830	172 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	CCL4L1	Q8NHW4	92 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	C10orf82	Q8WW14	230 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	RAB37	Q96AX2	223 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	CHCHD1	Q96BP2	118 aa	Known RBP	4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	ZNRD1	Q9P1U0	126 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	LRP4	O75096	1905 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	SCN9A	Q15858	1988 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	NUP205	Q92621	2012 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	IGKV1D-37	A0A075B6S9	117 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392		K7EP34	96 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	TCL1B	O95988	128 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	NPY	P01303	97 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms