RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ZNF331Q9NQX6 463 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 RCL1Q9Y2P8 373 aaKnown RBP3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 BRCA2P51587 3418 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 PTPRSQ13332 1948 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 ANAPC1Q9H1A4 1944 aa3.62□□□□□ -1.83
HMGB3P13-201ENST00000511263 IGLV7-46A0A075B6I9 117 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM236DA0A1B0GTK5 79 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 A8MWL6 223 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 ATOX1O00244 68 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 NGFP01138 241 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 IGHV4-31P0DP07 118 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM236CP0DP71 79 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 COX7CP15954 63 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 CRYGSP22914 178 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 CSN1S1P47710 185 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 VMA21Q3ZAQ7 101 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 Q5XG85 94 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 TMEM14EPQ6UXP3 125 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 AAED1Q7RTV5 226 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 NOTCH2NLQ7Z3S9 236 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM19A1Q7Z5A9 133 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 MEX3DQ86XN8 651 aaKnown RBP3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 AMN1Q8IY45 258 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 MMD2Q8IY49 270 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 TMEM252Q8N6L7 170 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 MAPKAPK5-AS1Q8N8E1 139 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 OR2A1Q8NGT9 310 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 OR10AC1Q8NH08 325 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 FGFBP3Q8TAT2 258 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 MGST2Q99735 147 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 PDCD1LG2Q9BQ51 273 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 RNASE7Q9H1E1 156 aaKnown RBP3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 RETNQ9HD89 108 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 TNFRSF19Q9NS68 423 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZNF256Q9Y2P7 627 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 HILPDAQ9Y5L2 63 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 TMEM14AQ9Y6G1 99 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 DOCK4Q8N1I0 1966 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 PDE4DIPQ5VU43 2346 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 MYO9BQ13459 2157 aa3.61□□□□□ -1.83
HMGB3P13-201ENST00000511263 DOCK6Q96HP0 2047 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 CEP290O15078 2479 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRAV8-2A0A0B4J237 113 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRAV13-1A0A0B4J241 112 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRAV8-4A0A0B4J246 113 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 A0A0J9YWU9 116 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 A0A0U1RQV1 116 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 LOC107986453A0A1B0GWG9 222 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 C11orf94C9JXX5 98 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 F2Z2F3 143 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 LINC01619G3V211 115 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 PDCD6O75340 191 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZFAND5O76080 213 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 NUDT14O95848 222 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 IL4P05112 153 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 ACYP1P07311 99 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 P0DMU3 169 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM231AP0DMU4 169 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM231CP0DMU5 169 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 FGF6P10767 208 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZNF136P52737 540 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 C1orf61Q13536 156 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 PMAIP1Q13794 54 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 TMEM187Q14656 261 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 RTL8BQ17RB0 113 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 ABCA11PQ4W5N1 156 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 C1orf100Q5SVJ3 147 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 ADAMTSL4-AS1Q5T5F5 129 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 MRPL2Q5T653 305 aaKnown RBP3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 Q6ZS52 159 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 ATP5L2Q7Z4Y8 100 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 MRPL55Q7Z7F7 128 aaKnown RBP3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 RPS19BP1Q86WX3 136 aaKnown RBP3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 SBSPONQ8IVN8 264 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 CEND1Q8N111 149 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM19A2Q8N3H0 131 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 THAP8Q8NA92 274 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 DPH3Q96FX2 82 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 SMIM14Q96QK8 99 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 SLC25A2Q9BXI2 301 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 PRRG4Q9BZD6 226 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZNF442Q9H7R0 627 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 CACNG5Q9UF02 275 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 KLF13Q9Y2Y9 288 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 F5P12259 2224 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 CPAMD8Q8IZJ3 1885 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 SCN2AQ99250 2005 aa3.6□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRAV27A0A087WT01 109 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRAV2A0A0B4J234 112 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 TRAV4A0A0B4J268 109 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM236AA0A1B0GUQ0 79 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM236BA0A1B0GV22 79 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 C15orf61A6NNL5 157 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 H7C1H1 209 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 CCL22O00626 93 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 CDK2AP2O75956 126 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 PYYP10082 97 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 COX5AP20674 150 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 HLA-DMBP28068 263 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 INSL3P51460 131 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms