RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 CA7P43166 264 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 NUDT2P50583 147 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 RBM11P57052 281 aaKnown RBP2.43□□□□□ -2.02
NUP54-209ENST00000510569 HOXC5Q00444 222 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 HSD52Q0P140 79 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 ELOCQ15369 112 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 C6orf52Q5T4I8 152 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 C1orf140Q5VVS0 124 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 XAF1Q6GPH4 301 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 LAIR2Q6ISS4 152 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 RPL22L1Q6P5R6 122 aaKnown RBP2.43□□□□□ -2.02
NUP54-209ENST00000510569 SLC25A34Q6PIV7 304 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 DEFB106AQ8N104 65 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 ZNF555Q8NEP9 628 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 OR4K5Q8NGD3 323 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 C15orf40Q8WUR7 153 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 C1QTNF6Q9BXI9 259 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 PRO3102Q9H379 93 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 CBLN4Q9NTU7 201 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 CCDC167Q9P0B6 97 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 ZNF706Q9Y5V0 76 aaPredicted RBP2.43□□□□□ -2.02
NUP54-209ENST00000510569 OBSL1O75147 1896 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 COL5A1P20908 1838 aaPredicted RBP2.42□□□□□ -2.02
NUP54-209ENST00000510569 ATG2AQ2TAZ0 1938 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 NUP214P35658 2090 aaPredicted RBP2.42□□□□□ -2.02
NUP54-209ENST00000510569 A0A087WXM4 84 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 TRAV19A0A0A6YYK7 116 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 PNMA8CA0A1B0GUJ8 204 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 TMEM72A0PK05 275 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 CD5LO43866 347 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 SNAPC5O75971 98 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 LTAP01374 205 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 HLA-DPB1P04440 258 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 ZNF286BP0CG31 522 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 SDC2P34741 201 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 ZNF83P51522 516 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 KRTAP12-4P60329 112 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 PLGLB1Q02325 96 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 RRN3P1Q2M238 152 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 ZNF678Q5SXM1 525 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 HES3Q5TGS1 186 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 EBLN2Q6P2I7 272 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 LCN15Q6UWW0 184 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 MARCH3Q86UD3 253 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 GKN2Q86XP6 184 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 C10orf126Q8N4M7 172 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 OR1J4Q8NGS1 313 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 OR10AC1Q8NH08 325 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 SGMS2Q8NHU3 365 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 TIMM17AQ99595 171 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 TBL1YQ9BQ87 522 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 GGTLC1Q9BX51 225 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 GABARAPL1Q9H0R8 117 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 TCEAL2Q9H3H9 227 aaPredicted RBP2.42□□□□□ -2.02
NUP54-209ENST00000510569 TUBA4BQ9H853 241 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 PLEKHF2Q9H8W4 249 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 OTORQ9NRC9 128 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 RPRMQ9NS64 109 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 ZNF492Q9P255 531 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 TAC3Q9UHF0 121 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 AP4S1Q9Y587 144 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 IER3IP1Q9Y5U9 82 aa2.42□□□□□ -2.02
NUP54-209ENST00000510569 RANBP2P49792 3224 aaKnown RBP2.42□□□□□ -2.02
NUP54-209ENST00000510569 KIAA0100Q14667 2235 aaKnown RBP2.41□□□□□ -2.02
NUP54-209ENST00000510569 CEP290O15078 2479 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 PTPRSQ13332 1948 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 TRAV41A0A0B4J266 112 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 C7orf71A4D174 169 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 C1orf196B1AJZ1 125 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 FNDC10F2Z333 226 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 ZNF73O43830 326 aaPredicted RBP2.41□□□□□ -2.02
NUP54-209ENST00000510569 LYZL6O75951 148 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 GABARAPO95166 117 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 TNFP01375 233 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 LINC00869P0C866 280 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 S100A2P29034 98 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 DAPP51397 102 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 INSL3P51460 131 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 TPPP2P59282 170 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 PYY3Q5JQD4 70 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 TMEM244Q5VVB8 128 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 ZNF880Q6PDB4 577 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 FOXI2Q6ZQN5 318 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 LCA10Q71F78 164 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 TRAPPC6BQ86SZ2 158 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 C3orf22Q8N5N4 141 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 ZDHHC22Q8N966 263 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 PLPP5Q8NEB5 264 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 OR8A1Q8NGG7 326 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 OR2T10Q8NGZ9 312 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 FAM57AQ8TBR7 257 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 SDF2Q99470 211 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 MRPL32Q9BYC8 188 aaKnown RBP2.41□□□□□ -2.02
NUP54-209ENST00000510569 MED9Q9NWA0 146 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 TAS2R8Q9NYW2 309 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 CKLFQ9UBR5 152 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 FUT9Q9Y231 359 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 MRPS16Q9Y3D3 137 aaKnown RBP2.41□□□□□ -2.02
NUP54-209ENST00000510569 DNAJC15Q9Y5T4 150 aa2.41□□□□□ -2.02
NUP54-209ENST00000510569 MPC1Q9Y5U8 109 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms