RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 PRB2P02812 416 aaPredicted RBP5□□□□□ -1.61
CLCN3-204ENST00000504131 CRYGAP11844 174 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 LAGE3Q14657 143 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 DAND5Q8N907 189 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 ARHGAP5-AS1Q96IT6 56 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 CSRP1P21291 193 aaKnown RBP5□□□□□ -1.61
CLCN3-204ENST00000504131 ZNF876PQ49A33 203 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 Q6ZS92 163 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 RFLNBQ8N5W9 214 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 WFDC9Q8NEX5 89 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 NDUFC1O43677 76 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 CFAP126Q5VTH2 177 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 ZCCHC24Q8N2G6 241 aaKnown RBP5□□□□□ -1.61
CLCN3-204ENST00000504131 RBM12B-AS1Q9P1G2 102 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 ABCA7Q8IZY2 2146 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 HMGN2P05204 90 aaKnown RBP4.99□□□□□ -1.61
CLCN3-204ENST00000504131 LMO1P25800 156 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 SLC48A1Q6P1K1 146 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 VN1R4Q7Z5H5 301 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 ZPLD1Q8TCW7 415 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 WFDC6Q9BQY6 131 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 TIMM9Q9Y5J7 89 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 C2orf83Q53S99 150 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 PAPPA-AS1Q5QFB9 102 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 FAM19A4Q96LR4 140 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 YPEL2Q96QA6 119 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 UBL5Q9BZL1 73 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 TRBV5-3A0A0A0MS03 114 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 TRBV10-2A0A0K0K1G8 114 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 HMGN4O00479 90 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 ZNF73O43830 326 aaPredicted RBP4.99□□□□□ -1.61
CLCN3-204ENST00000504131 HMGA2P52926 109 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 TEX49A0A1B0GTD5 131 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 P0DMU3 169 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 FAM231AP0DMU4 169 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 FAM231CP0DMU5 169 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 FAM216BQ8N7L0 139 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 PLA2G2FQ9BZM2 168 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 KLK15Q9H2R5 256 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 TOMM6Q96B49 74 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 DPH3P1Q9H4G8 78 aa4.99□□□□□ -1.61
CLCN3-204ENST00000504131 PRB1P04280 392 aa4.98□□□□□ -1.61
CLCN3-204ENST00000504131 PLNP26678 52 aa4.98□□□□□ -1.61
CLCN3-204ENST00000504131 GNB1P62873 340 aa4.98□□□□□ -1.61
CLCN3-204ENST00000504131 DKK2Q9UBU2 259 aa4.98□□□□□ -1.61
CLCN3-204ENST00000504131 TRBV7-6A0A0J9YX20 115 aa4.98□□□□□ -1.61
CLCN3-204ENST00000504131 C2CD4DB7Z1M9 353 aa4.98□□□□□ -1.61
CLCN3-204ENST00000504131 LGALS9O00182 355 aa4.98□□□□□ -1.61
CLCN3-204ENST00000504131 FFAR1O14842 300 aa4.98□□□□□ -1.61
CLCN3-204ENST00000504131 VSIG8P0DPA2 414 aa4.98□□□□□ -1.61
CLCN3-204ENST00000504131 CDSNQ15517 529 aa4.98□□□□□ -1.61
CLCN3-204ENST00000504131 SMRP1Q8NCR6 262 aa4.98□□□□□ -1.61
CLCN3-204ENST00000504131 SRXN1Q9BYN0 137 aa4.98□□□□□ -1.61
CLCN3-204ENST00000504131 LYPD3O95274 346 aa4.98□□□□□ -1.61
CLCN3-204ENST00000504131 ATP1A1-AS1Q5TC04 95 aa4.98□□□□□ -1.61
CLCN3-204ENST00000504131 SBF1O95248 1867 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 TRBV27A0A0K0K1C4 114 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 ETV2O00321 342 aaPredicted RBP4.97□□□□□ -1.61
CLCN3-204ENST00000504131 SDIM1Q6ZPB5 146 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 DEFB119Q8N690 84 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 TRBV25-1A0A075B6N4 114 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 IGHV3OR15-7A0A075B7D8 119 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 C5orf67F2Z3F1 127 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 C5orf38Q86SI9 138 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 LINC00482Q8N8I6 264 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 ADAMTSL1Q8N6G6 1762 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 TRAV23DV6A0A075B6W5 121 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 F8WEM9 126 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 RFPL3SP0C7P2 107 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 REG3AQ06141 175 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 SCGB3A1Q96QR1 104 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 SHROOM3Q8TF72 1996 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 RBBP6Q7Z6E9 1792 aaKnown RBP4.97□□□□□ -1.61
CLCN3-204ENST00000504131 GFRA3O60609 400 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 CSRP3P50461 194 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 ZNF625Q96I27 306 aaPredicted RBP4.97□□□□□ -1.61
CLCN3-204ENST00000504131 UPK3BQ9BT76 320 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 PTPRFP10586 1907 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 C5orf63A6NC05 138 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 C15orf61A6NNL5 157 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 TRBV12-3P01733 135 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 Q6ZSR3 168 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 SLC25A48Q6ZT89 311 aaKnown RBP4.97□□□□□ -1.61
CLCN3-204ENST00000504131 RPP21Q9H633 154 aaKnown RBP4.97□□□□□ -1.61
CLCN3-204ENST00000504131 CELA1Q9UNI1 258 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 HHLA3Q9XRX5 114 aa4.97□□□□□ -1.61
CLCN3-204ENST00000504131 TRGV5A0A0B4J1U4 118 aa4.96□□□□□ -1.61
CLCN3-204ENST00000504131 PSPHP1O15172 72 aa4.96□□□□□ -1.61
CLCN3-204ENST00000504131 NHLRC4P0CG21 123 aaPredicted RBP4.96□□□□□ -1.61
CLCN3-204ENST00000504131 FGF12P61328 243 aa4.96□□□□□ -1.61
CLCN3-204ENST00000504131 C20orf204Q6ZNR8 217 aa4.96□□□□□ -1.61
CLCN3-204ENST00000504131 PHIPQ8WWQ0 1821 aa4.96□□□□□ -1.62
CLCN3-204ENST00000504131 C15orf65H3BRN8 121 aa4.96□□□□□ -1.62
CLCN3-204ENST00000504131 FAM19A1Q7Z5A9 133 aa4.96□□□□□ -1.62
CLCN3-204ENST00000504131 TRAV3A0A0B4J244 114 aa4.96□□□□□ -1.62
CLCN3-204ENST00000504131 TRAV12-1A0A0B4J245 112 aa4.96□□□□□ -1.62
CLCN3-204ENST00000504131 LOXP28300 417 aaPredicted RBP4.96□□□□□ -1.62
CLCN3-204ENST00000504131 FXYD7P58549 80 aa4.96□□□□□ -1.62
CLCN3-204ENST00000504131 RHOHQ15669 191 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms