RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 J3QR89 54 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 OR2H2O95918 312 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 CSN2P05814 226 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 ZNF14P17017 642 aaPredicted RBP2.73□□□□□ -1.97
CCL20-204ENST00000489160 RPL7P18124 248 aaKnown RBP2.73□□□□□ -1.97
CCL20-204ENST00000489160 RPS4Y1P22090 263 aaKnown RBP2.73□□□□□ -1.97
CCL20-204ENST00000489160 RPS3P23396 243 aaKnown RBP eCLIP2.73□□□□□ -1.974e-14■■■■■ 33
CCL20-204ENST00000489160 YPEL3P61236 119 aaPredicted RBP2.73□□□□□ -1.97
CCL20-204ENST00000489160 HIST1H1AQ02539 215 aaPredicted RBP2.73□□□□□ -1.97
CCL20-204ENST00000489160 KRTAP25-1Q3LHN0 102 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 FAM229BQ4G0N7 80 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 PYDC2Q56P42 97 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
CCL20-204ENST00000489160 TCTE3Q8IZS6 198 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 LYPD1Q8N2G4 141 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 Q8NAQ8 132 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 C1orf64Q8NEQ6 169 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 SMCR5Q8TEV8 140 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 TMEM106AQ96A25 262 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 ADAT3Q96EY9 351 aaPredicted RBP2.73□□□□□ -1.97
CCL20-204ENST00000489160 OR2H1Q9GZK4 316 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 LPAR5Q9H1C0 372 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 METTL1Q9UBP6 276 aaKnown RBP2.73□□□□□ -1.97
CCL20-204ENST00000489160 CKLFQ9UBR5 152 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 MARCOQ9UEW3 520 aaPredicted RBP2.73□□□□□ -1.97
CCL20-204ENST00000489160 NAT8Q9UHE5 227 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 HIGD1AQ9Y241 93 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 TIMM9Q9Y5J7 89 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 COL18A1P39060 1754 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 RBBP6Q7Z6E9 1792 aaKnown RBP2.73□□□□□ -1.97
CCL20-204ENST00000489160 NAIPQ13075 1403 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 MYH3P11055 1940 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 BRCA2P51587 3418 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 UBR3Q6ZT12 1888 aa2.73□□□□□ -1.97
CCL20-204ENST00000489160 TRIOBPQ9H2D6 2365 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 A0A0J9YW62 118 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 IFITM5A6NNB3 132 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 IGHV3-7P01780 117 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 RPS25P62851 125 aaKnown RBP2.72□□□□□ -1.97
CCL20-204ENST00000489160 CDK6Q00534 326 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 KRTAP13-2Q52LG2 175 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 PABPC1L2AQ5JQF8 200 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.72□□□□□ -1.97
CCL20-204ENST00000489160 BCL2L15Q5TBC7 163 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 MYOM3Q5VTT5 1437 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 LYPD6Q86Y78 171 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 OR10D4PQ8NGN7 298 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 PRUNE2Q8WUY3 3088 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 OR2J1Q9GZK6 312 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 OR8D2Q9GZM6 311 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 CACYBPQ9HB71 228 aaKnown RBP2.72□□□□□ -1.97
CCL20-204ENST00000489160 TP73-AS1Q9UF72 201 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 MED31Q9Y3C7 131 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 AMMECR1Q9Y4X0 333 aaPredicted RBP2.72□□□□□ -1.97
CCL20-204ENST00000489160 DICER1Q9UPY3 1922 aaKnown RBP2.72□□□□□ -1.97
CCL20-204ENST00000489160 BAHCC1Q9P281 2608 aa2.72□□□□□ -1.97
CCL20-204ENST00000489160 TRPM7Q96QT4 1865 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 IGHV3-15A0A0B4J1V0 119 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 IGKV1D-43A0A0B4J1Z2 117 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 TRAV41A0A0B4J266 112 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 MDFIC2A0A1B0GVS7 189 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 IGLV3-19P01714 112 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 APODP05090 189 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 CD24P25063 80 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 PSMB8P28062 276 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 CCR2P41597 374 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 GNG4P50150 75 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 COL5A1-AS1Q5SY13 56 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 Q6ZS52 159 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 LCA10Q71F78 164 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 C4orf33Q8N1A6 199 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 C9orf62Q8N4C0 152 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 OR52R1Q8NGF1 315 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 OR51T1Q8NGJ9 327 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 OR5C1Q8NGR4 320 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 CMTM2Q8TAZ6 248 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 SLAMF6Q96DU3 332 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 SCGB3A1Q96QR1 104 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 IMMP2LQ96T52 175 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 PRADC1Q9BSG0 188 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 C16orf95Q9H693 158 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 V9GYS6 101 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 LAMA2P24043 3122 aaKnown RBP2.71□□□□□ -1.98
CCL20-204ENST00000489160 ADAMTSL1Q8N6G6 1762 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 MUC3AQ02505 3323 aa2.71□□□□□ -1.98
CCL20-204ENST00000489160 ATAD5Q96QE3 1844 aa2.7□□□□□ -1.98
CCL20-204ENST00000489160 H3BT86 120 aa2.7□□□□□ -1.98
CCL20-204ENST00000489160 ZNF73O43830 326 aaPredicted RBP2.7□□□□□ -1.98
CCL20-204ENST00000489160 DPM2O94777 84 aa2.7□□□□□ -1.98
CCL20-204ENST00000489160 CPSF4O95639 269 aaKnown RBP2.7□□□□□ -1.98
CCL20-204ENST00000489160 MSMBP08118 114 aa2.7□□□□□ -1.98
CCL20-204ENST00000489160 BCL2P10415 239 aa2.7□□□□□ -1.98
CCL20-204ENST00000489160 COL8A2P25067 703 aa2.7□□□□□ -1.98
CCL20-204ENST00000489160 SRP14P37108 136 aaKnown RBP2.7□□□□□ -1.98
CCL20-204ENST00000489160 RAB5CP51148 216 aa2.7□□□□□ -1.98
CCL20-204ENST00000489160 COPZ1P61923 177 aa2.7□□□□□ -1.98
CCL20-204ENST00000489160 EIF5AP63241 154 aaKnown RBP2.7□□□□□ -1.98
CCL20-204ENST00000489160 DEFB134Q4QY38 66 aa2.7□□□□□ -1.98
CCL20-204ENST00000489160 NCMAPQ5T1S8 102 aa2.7□□□□□ -1.98
CCL20-204ENST00000489160 SLC35E3Q7Z769 313 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms