RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 CCDC88CQ9P219 2028 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 MYO9BQ13459 2157 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 IGLV3-9A0A075B6K5 115 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 TRGV5A0A0B4J1U4 118 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 TRAV1-1A0A0B4J248 108 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 IGKV6D-41A0A0C4DH26 115 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 RBAKDNA6NC62 111 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 APOC4-APOC2K7ER74 178 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 M0R2P5 195 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 NDUFB6O95139 128 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 NDUFB2O95178 105 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 TRACP01848 142 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 APOC2P02655 101 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 TPT1P13693 172 aaKnown RBP2.81□□□□□ -1.96
VPS41-212ENST00000482217 RPL18Q07020 188 aaKnown RBP2.81□□□□□ -1.96
VPS41-212ENST00000482217 MRPL51Q4U2R6 128 aaKnown RBP2.81□□□□□ -1.96
VPS41-212ENST00000482217 TMEM155Q4W5P6 130 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 SPRNQ5BIV9 151 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 CEND1Q8N111 149 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 ZFAND2AQ8N6M9 145 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 LINC00301Q8NCQ3 95 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 CIRBP-AS1Q8TBR5 109 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 OSTCQ9NRP0 149 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 GAPVD1Q14C86 1478 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 TOP2AP11388 1531 aaKnown RBP2.81□□□□□ -1.96
VPS41-212ENST00000482217 DIP2BQ9P265 1576 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 RGPD4Q7Z3J3 1758 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 PLXNA4Q9HCM2 1894 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 ARID1AO14497 2285 aa2.81□□□□□ -1.96
VPS41-212ENST00000482217 BRWD3Q6RI45 1802 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 ABCC3O15438 1527 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 DAPK1P53355 1430 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 IGHV3-66A0A0C4DH42 116 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 A0A0D9SG52 128 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 IGHV7-4-1A0A0J9YVY3 117 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 MDFIC2A0A1B0GVS7 189 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 A8MWP4 228 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 K7EP34 96 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 SERF1AO75920 110 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 SLC25A14O95258 325 aaPredicted RBP2.8□□□□□ -1.96
VPS41-212ENST00000482217 TRGV3P03979 118 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 HSPB1P04792 205 aaKnown RBP2.8□□□□□ -1.96
VPS41-212ENST00000482217 YPEL3P61236 119 aaPredicted RBP2.8□□□□□ -1.96
VPS41-212ENST00000482217 RPL26P61254 145 aaKnown RBP2.8□□□□□ -1.96
VPS41-212ENST00000482217 LPAL2Q16609 132 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 ZFP2Q6ZN57 461 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 TMEM256Q8N2U0 113 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 ZNF714Q96N38 554 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 HIST1H2BLQ99880 126 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 SPANXDQ9BXN6 97 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 C11orf1Q9H5F2 150 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 RPL26L1Q9UNX3 145 aaKnown RBP2.8□□□□□ -1.96
VPS41-212ENST00000482217 ARHGAP21Q5T5U3 1957 aa2.8□□□□□ -1.96
VPS41-212ENST00000482217 PLXNA3P51805 1871 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 DOCK2Q92608 1830 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 TMEM131LA2VDJ0 1609 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 TRPM1Q7Z4N2 1603 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 HMGXB3Q12766 1538 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 LMTK2Q8IWU2 1503 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 FYCO1Q9BQS8 1478 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 ABCC5O15440 1437 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 EEA1Q15075 1411 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 IGHV3-49A0A0A0MS15 119 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 IGHV5-51A0A0C4DH38 117 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 C19orf71A6NCJ1 209 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 ZNF737O75373 536 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 UBL3O95164 117 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 TCL1BO95988 128 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 RBP4P02753 201 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 SLC25A4P12235 298 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 SLC25A6P12236 298 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 FABP4P15090 132 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 NPPCP23582 126 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 OR2T2Q6IF00 324 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 C10orf111Q8N326 155 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 C15orf56Q8N910 161 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 TSLPQ969D9 159 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 RMI2Q96E14 147 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 HYLS1Q96M11 299 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 SMCO4Q9NRQ5 59 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 PTPRSQ13332 1948 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 GREB1Q4ZG55 1949 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 RGPD3A6NKT7 1758 aaPredicted RBP2.79□□□□□ -1.96
VPS41-212ENST00000482217 STRCQ7RTU9 1775 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 KNDC1Q76NI1 1749 aa2.79□□□□□ -1.96
VPS41-212ENST00000482217 MAGI3Q5TCQ9 1506 aa2.78□□□□□ -1.96
VPS41-212ENST00000482217 CASKIN1Q8WXD9 1431 aa2.78□□□□□ -1.96
VPS41-212ENST00000482217 KIAA1549Q9HCM3 1950 aa2.78□□□□□ -1.96
VPS41-212ENST00000482217 PTPRFP10586 1907 aa2.78□□□□□ -1.96
VPS41-212ENST00000482217 PTPRDP23468 1912 aa2.78□□□□□ -1.96
VPS41-212ENST00000482217 IGLV1-50A0A075B6I6 118 aa2.78□□□□□ -1.96
VPS41-212ENST00000482217 IGHV5-10-1A0A0J9YXX1 117 aa2.78□□□□□ -1.96
VPS41-212ENST00000482217 IGLC7A0M8Q6 106 aa2.78□□□□□ -1.96
VPS41-212ENST00000482217 A6NED7 52 aa2.78□□□□□ -1.96
VPS41-212ENST00000482217 G3V3Q6 166 aa2.78□□□□□ -1.96
VPS41-212ENST00000482217 C3orf84H3BNL1 204 aa2.78□□□□□ -1.96
VPS41-212ENST00000482217 SOD1P00441 154 aa2.78□□□□□ -1.96
VPS41-212ENST00000482217 IGKV1D-33P01593 117 aa2.78□□□□□ -1.96
VPS41-212ENST00000482217 IGKV1-33P01594 117 aa2.78□□□□□ -1.96
VPS41-212ENST00000482217 APCSP02743 223 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms