RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 PRR31Q5SQ13 230 aa12.09□□□□□ -0.47
C9orf3-218ENST00000482056 ZNF562Q6V9R5 426 aa12.09□□□□□ -0.47
C9orf3-218ENST00000482056 GATD1Q8NB37 220 aa12.09□□□□□ -0.47
C9orf3-218ENST00000482056 KLRD1Q13241 179 aa12.09□□□□□ -0.47
C9orf3-218ENST00000482056 TTC9CQ8N5M4 171 aa12.09□□□□□ -0.47
C9orf3-218ENST00000482056 KIR3DL3Q8N743 410 aa12.09□□□□□ -0.47
C9orf3-218ENST00000482056 ABCA1O95477 2261 aa12.08□□□□□ -0.47
C9orf3-218ENST00000482056 BSNQ9UPA5 3926 aa12.08□□□□□ -0.48
C9orf3-218ENST00000482056 SMG1Q96Q15 3661 aaKnown RBP12.08□□□□□ -0.48
C9orf3-218ENST00000482056 FBLL1A6NHQ2 334 aaKnown RBP12.08□□□□□ -0.48
C9orf3-218ENST00000482056 ARMS2P0C7Q2 107 aa12.08□□□□□ -0.48
C9orf3-218ENST00000482056 TFPI2P48307 235 aa12.08□□□□□ -0.48
C9orf3-218ENST00000482056 KLF17Q5JT82 389 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-218ENST00000482056 PET117Q6UWS5 81 aa12.08□□□□□ -0.48
C9orf3-218ENST00000482056 C1orf122Q6ZSJ8 110 aa12.08□□□□□ -0.48
C9orf3-218ENST00000482056 C21orf62Q9NYP8 219 aa12.08□□□□□ -0.48
C9orf3-218ENST00000482056 NCBP2LA6PVI3 153 aaKnown RBP12.07□□□□□ -0.48
C9orf3-218ENST00000482056 RPL7P18124 248 aaKnown RBP12.07□□□□□ -0.48
C9orf3-218ENST00000482056 ARL6IP6Q8N6S5 226 aa12.07□□□□□ -0.48
C9orf3-218ENST00000482056 STPG4Q8N801 248 aa12.07□□□□□ -0.48
C9orf3-218ENST00000482056 IGFBPL1Q8WX77 278 aa12.07□□□□□ -0.48
C9orf3-218ENST00000482056 FANCD2OSQ96PS1 177 aa12.07□□□□□ -0.48
C9orf3-218ENST00000482056 ANKHD1Q8IWZ3 2542 aaKnown RBP12.07□□□□□ -0.48
C9orf3-218ENST00000482056 ATMQ13315 3056 aa12.07□□□□□ -0.48
C9orf3-218ENST00000482056 LY6HO94772 140 aa12.07□□□□□ -0.48
C9orf3-218ENST00000482056 TPRP12270 2363 aaKnown RBP12.06□□□□□ -0.48
C9orf3-218ENST00000482056 ZNF785A8K8V0 405 aa12.06□□□□□ -0.48
C9orf3-218ENST00000482056 NPSP0C0P6 89 aa12.06□□□□□ -0.48
C9orf3-218ENST00000482056 UCNP55089 124 aa12.06□□□□□ -0.48
C9orf3-218ENST00000482056 MINOS1Q5TGZ0 78 aa12.06□□□□□ -0.48
C9orf3-218ENST00000482056 SPATA12Q7Z6I5 190 aa12.06□□□□□ -0.48
C9orf3-218ENST00000482056 MINOS1-NBL1R4GNA1 71 aa12.06□□□□□ -0.48
C9orf3-218ENST00000482056 S4R3C0 116 aa12.06□□□□□ -0.48
C9orf3-218ENST00000482056 ADGRG4Q8IZF6 3080 aa12.06□□□□□ -0.48
C9orf3-218ENST00000482056 A0A1W2PRD5 423 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 A0A1W2PRF3 423 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 A0A1W2PRM7 423 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 TMEM189A5PLL7 270 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 M0R3E3 92 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 HINT1P49773 126 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-218ENST00000482056 KLRB1Q12918 225 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 SAPCD1Q5SSQ6 148 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 FA2HQ7L5A8 372 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 VMO1Q7Z5L0 202 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 TMUB1Q9BVT8 246 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 TPPP3Q9BW30 176 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 AP5S1Q9NUS5 200 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 CSN3P07498 182 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 C11orf71Q6IPW1 123 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 Q71RC1 249 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-218ENST00000482056 PRSS3P2Q8NHM4 247 aa12.05□□□□□ -0.48
C9orf3-218ENST00000482056 KALRNO60229 2985 aa12.04□□□□□ -0.48
C9orf3-218ENST00000482056 OVOL3O00110 214 aa12.04□□□□□ -0.48
C9orf3-218ENST00000482056 CRIP1P50238 77 aa12.04□□□□□ -0.48
C9orf3-218ENST00000482056 ZNF493Q6ZR52 646 aa12.04□□□□□ -0.48
C9orf3-218ENST00000482056 LINC00173Q6ZV60 143 aa12.04□□□□□ -0.48
C9orf3-218ENST00000482056 ORAOV1Q8WV07 137 aa12.04□□□□□ -0.48
C9orf3-218ENST00000482056 C8orf49Q96NF6 230 aa12.04□□□□□ -0.48
C9orf3-218ENST00000482056 RABAC1Q9UI14 185 aa12.04□□□□□ -0.48
C9orf3-218ENST00000482056 TLN1Q9Y490 2541 aaKnown RBP12.04□□□□□ -0.48
C9orf3-218ENST00000482056 TMEM11P17152 192 aa12.03□□□□□ -0.48
C9orf3-218ENST00000482056 RPS20P60866 119 aaKnown RBP12.03□□□□□ -0.48
C9orf3-218ENST00000482056 EBI3Q14213 229 aa12.03□□□□□ -0.48
C9orf3-218ENST00000482056 Q8N6K4 173 aa12.03□□□□□ -0.48
C9orf3-218ENST00000482056 MUC6Q6W4X9 2439 aa12.03□□□□□ -0.48
C9orf3-218ENST00000482056 ZNF138P52744 262 aa12.03□□□□□ -0.48
C9orf3-218ENST00000482056 ADORA2A-AS1P86434 159 aa12.03□□□□□ -0.48
C9orf3-218ENST00000482056 OR10AG1Q8NH19 301 aa12.03□□□□□ -0.48
C9orf3-218ENST00000482056 ASCL2Q99929 193 aa12.03□□□□□ -0.48
C9orf3-218ENST00000482056 MS4A6AQ9H2W1 248 aa12.03□□□□□ -0.48
C9orf3-218ENST00000482056 F8W735 103 aaPredicted RBP12.02□□□□□ -0.49
C9orf3-218ENST00000482056 SH2D1AO60880 128 aa12.02□□□□□ -0.49
C9orf3-218ENST00000482056 SLC25A34Q6PIV7 304 aa12.02□□□□□ -0.49
C9orf3-218ENST00000482056 COX8CQ7Z4L0 72 aa12.02□□□□□ -0.49
C9orf3-218ENST00000482056 PTPRQQ9UMZ3 2332 aa12.02□□□□□ -0.49
C9orf3-218ENST00000482056 OR2T8A6NH00 312 aa12.01□□□□□ -0.49
C9orf3-218ENST00000482056 NDUFB8O95169 186 aa12.01□□□□□ -0.49
C9orf3-218ENST00000482056 BMI1P35226 326 aa12.01□□□□□ -0.49
C9orf3-218ENST00000482056 NDPQ00604 133 aa12.01□□□□□ -0.49
C9orf3-218ENST00000482056 RELQ04864 619 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-218ENST00000482056 LYZL1Q6UWQ5 148 aa12.01□□□□□ -0.49
C9orf3-218ENST00000482056 MSRB2Q9Y3D2 182 aa12.01□□□□□ -0.49
C9orf3-218ENST00000482056 SPTBN2O15020 2390 aa12.01□□□□□ -0.49
C9orf3-218ENST00000482056 FAM106CPP0CH98 169 aa12.01□□□□□ -0.49
C9orf3-218ENST00000482056 BCL6BQ8N143 479 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-218ENST00000482056 ZNF738Q8NE65 137 aa12.01□□□□□ -0.49
C9orf3-218ENST00000482056 ARHGAP32A7KAX9 2087 aa12□□□□□ -0.49
C9orf3-218ENST00000482056 hDV102S1A0JD36 115 aa12□□□□□ -0.49
C9orf3-218ENST00000482056 IGHV3-23P01764 117 aa12□□□□□ -0.49
C9orf3-218ENST00000482056 FBLN7Q53RD9 439 aa12□□□□□ -0.49
C9orf3-218ENST00000482056 LINC01545Q5VT33 79 aa12□□□□□ -0.49
C9orf3-218ENST00000482056 TIMM8BQ9Y5J9 83 aaPredicted RBP12□□□□□ -0.49
C9orf3-218ENST00000482056 PTPRZ1P23471 2315 aaPredicted RBP12□□□□□ -0.49
C9orf3-218ENST00000482056 IGKV2-40A0A087WW87 121 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-218ENST00000482056 TMSB15BA0A087X1C1 80 aa11.99□□□□□ -0.49
C9orf3-218ENST00000482056 H0Y8G0 127 aa11.99□□□□□ -0.49
C9orf3-218ENST00000482056 IGKV2D-40P01614 121 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-218ENST00000482056 RAB9AP51151 201 aa11.99□□□□□ -0.49
C9orf3-218ENST00000482056 DTX2Q86UW9 622 aa11.99□□□□□ -0.49
C9orf3-218ENST00000482056 DYNAPQ8N1N2 210 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms