RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 J3KRW8 73 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 TMEM127O75204 238 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 FABP1P07148 127 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 SULT1A3P0DMM9 295 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 SULT1A4P0DMN0 295 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 ORM2P19652 201 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 RPS19P39019 145 aaKnown RBP6.53□□□□□ -1.36
GPNMB-211ENST00000479625 NEDD8Q15843 81 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 SCGB2B2Q4G0G5 96 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 GFI1BQ5VTD9 330 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 FAAP20Q6NZ36 180 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 WFDC10BQ8IUB3 73 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 THAP8Q8NA92 274 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 OR4D5Q8NGN0 318 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 ZFAND1Q8TCF1 268 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 DEFB104AQ8WTQ1 72 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 TRGV9Q99603 122 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 NAA60Q9H7X0 242 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 MSRB1Q9NZV6 116 aa6.53□□□□□ -1.36
GPNMB-211ENST00000479625 H3BRN7 92 aa6.52□□□□□ -1.37
GPNMB-211ENST00000479625 TNFAIP8O95379 198 aa6.52□□□□□ -1.37
GPNMB-211ENST00000479625 CXCL3P19876 107 aa6.52□□□□□ -1.37
GPNMB-211ENST00000479625 GPX4P36969 197 aaPredicted RBP6.52□□□□□ -1.37
GPNMB-211ENST00000479625 LSM3P62310 102 aaKnown RBP6.52□□□□□ -1.37
GPNMB-211ENST00000479625 CROCCP3Q8IVE0 287 aa6.52□□□□□ -1.37
GPNMB-211ENST00000479625 LINC00467Q9BRT7 94 aa6.52□□□□□ -1.37
GPNMB-211ENST00000479625 RTBDNQ9BSG5 229 aaPredicted RBP6.52□□□□□ -1.37
GPNMB-211ENST00000479625 COMMD3Q9UBI1 195 aa6.52□□□□□ -1.37
GPNMB-211ENST00000479625 HSPB7Q9UBY9 170 aa6.52□□□□□ -1.37
GPNMB-211ENST00000479625 ICOSQ9Y6W8 199 aa6.52□□□□□ -1.37
GPNMB-211ENST00000479625 U3KQ87 197 aa6.52□□□□□ -1.37
GPNMB-211ENST00000479625 TRGV2A0A075B6R0 118 aa6.51□□□□□ -1.37
GPNMB-211ENST00000479625 LRCOL1A6NCL2 159 aa6.51□□□□□ -1.37
GPNMB-211ENST00000479625 B3GALNT1O75752 331 aa6.51□□□□□ -1.37
GPNMB-211ENST00000479625 VAMP1P23763 118 aa6.51□□□□□ -1.37
GPNMB-211ENST00000479625 PSG3Q16557 428 aa6.51□□□□□ -1.37
GPNMB-211ENST00000479625 CCDC28AQ8IWP9 274 aa6.51□□□□□ -1.37
GPNMB-211ENST00000479625 OR52I2Q8NH67 350 aa6.51□□□□□ -1.37
GPNMB-211ENST00000479625 TERB2Q8NHR7 220 aa6.51□□□□□ -1.37
GPNMB-211ENST00000479625 ANAPC16Q96DE5 110 aa6.51□□□□□ -1.37
GPNMB-211ENST00000479625 GPR82Q96P67 336 aa6.51□□□□□ -1.37
GPNMB-211ENST00000479625 TMEM147Q9BVK8 224 aa6.51□□□□□ -1.37
GPNMB-211ENST00000479625 SLC45A2Q9UMX9 530 aa6.51□□□□□ -1.37
GPNMB-211ENST00000479625 C14orf166Q9Y224 244 aaKnown RBP6.51□□□□□ -1.37
GPNMB-211ENST00000479625 LY96Q9Y6Y9 160 aa6.51□□□□□ -1.37
GPNMB-211ENST00000479625 TNXBP22105 4242 aa6.51□□□□□ -1.37
GPNMB-211ENST00000479625 SMIM31A0A1B0GVY4 71 aa6.5□□□□□ -1.37
GPNMB-211ENST00000479625 CRYM-AS1A6NIL9 109 aa6.5□□□□□ -1.37
GPNMB-211ENST00000479625 HPGDSO60760 199 aa6.5□□□□□ -1.37
GPNMB-211ENST00000479625 IGHV3-53P01767 116 aa6.5□□□□□ -1.37
GPNMB-211ENST00000479625 APOA1P02647 267 aa6.5□□□□□ -1.37
GPNMB-211ENST00000479625 SNRPCP09234 159 aaKnown RBP6.5□□□□□ -1.37
GPNMB-211ENST00000479625 IAPPP10997 89 aa6.5□□□□□ -1.37
GPNMB-211ENST00000479625 LYPD5Q6UWN5 251 aa6.5□□□□□ -1.37
GPNMB-211ENST00000479625 CCDC190Q86UF4 302 aa6.5□□□□□ -1.37
GPNMB-211ENST00000479625 BPIFCQ8NFQ6 507 aa6.5□□□□□ -1.37
GPNMB-211ENST00000479625 RPUSD4Q96CM3 377 aaKnown RBP6.5□□□□□ -1.37
GPNMB-211ENST00000479625 C20orf144Q9BQM9 153 aa6.5□□□□□ -1.37
GPNMB-211ENST00000479625 PAIP2BQ9ULR5 123 aaKnown RBP6.5□□□□□ -1.37
GPNMB-211ENST00000479625 FUT9Q9Y231 359 aa6.5□□□□□ -1.37
GPNMB-211ENST00000479625 TMEM56-RWDD3S4R434 201 aa6.5□□□□□ -1.37
GPNMB-211ENST00000479625 TRGV1A0A0A0MS02 117 aa6.49□□□□□ -1.37
GPNMB-211ENST00000479625 TRAV12-3A0A0B4J271 114 aa6.49□□□□□ -1.37
GPNMB-211ENST00000479625 LINC00854A0A1B0GVQ3 168 aa6.49□□□□□ -1.37
GPNMB-211ENST00000479625 PRAC2D3DTV9 90 aa6.49□□□□□ -1.37
GPNMB-211ENST00000479625 KRTAP10-4P60372 401 aaPredicted RBP6.49□□□□□ -1.37
GPNMB-211ENST00000479625 DAZ2Q13117 558 aaKnown RBP6.49□□□□□ -1.37
GPNMB-211ENST00000479625 SMCO1Q147U7 214 aa6.49□□□□□ -1.37
GPNMB-211ENST00000479625 GPR107Q5VW38 600 aa6.49□□□□□ -1.37
GPNMB-211ENST00000479625 GGNBP1Q5YKI7 109 aa6.49□□□□□ -1.37
GPNMB-211ENST00000479625 LYZL2Q7Z4W2 148 aa6.49□□□□□ -1.37
GPNMB-211ENST00000479625 Q8N814 137 aa6.49□□□□□ -1.37
GPNMB-211ENST00000479625 NTN5Q8WTR8 489 aaPredicted RBP6.49□□□□□ -1.37
GPNMB-211ENST00000479625 SHANK2-AS3Q9BTD1 123 aa6.49□□□□□ -1.37
GPNMB-211ENST00000479625 GSN-AS1Q9NRJ2 163 aa6.49□□□□□ -1.37
GPNMB-211ENST00000479625 RAB26Q9ULW5 256 aa6.49□□□□□ -1.37
GPNMB-211ENST00000479625 TRAV9-2A0A087WT02 112 aa6.48□□□□□ -1.37
GPNMB-211ENST00000479625 A0A087X0K7 114 aa6.48□□□□□ -1.37
GPNMB-211ENST00000479625 PRSS46E5RG02 174 aa6.48□□□□□ -1.37
GPNMB-211ENST00000479625 PSCAO43653 123 aa6.48□□□□□ -1.37
GPNMB-211ENST00000479625 ZNF324O75467 553 aaPredicted RBP6.48□□□□□ -1.37
GPNMB-211ENST00000479625 RAB3DO95716 219 aa6.48□□□□□ -1.37
GPNMB-211ENST00000479625 CFDP00746 253 aaPredicted RBP6.48□□□□□ -1.37
GPNMB-211ENST00000479625 TBPP20226 339 aa6.48□□□□□ -1.37
GPNMB-211ENST00000479625 CCR6P51684 374 aa6.48□□□□□ -1.37
GPNMB-211ENST00000479625 Q6ZSA8 131 aa6.48□□□□□ -1.37
GPNMB-211ENST00000479625 C11orf72Q8NBR9 251 aa6.48□□□□□ -1.37
GPNMB-211ENST00000479625 OR1S1Q8NH92 325 aa6.48□□□□□ -1.37
GPNMB-211ENST00000479625 LRRC20Q8TCA0 184 aa6.48□□□□□ -1.37
GPNMB-211ENST00000479625 MTFP1Q9UDX5 166 aa6.48□□□□□ -1.37
GPNMB-211ENST00000479625 H3BTX0 84 aa6.47□□□□□ -1.37
GPNMB-211ENST00000479625 SLC17A3O00476 420 aa6.47□□□□□ -1.37
GPNMB-211ENST00000479625 OXTP01178 125 aa6.47□□□□□ -1.37
GPNMB-211ENST00000479625 CRYGDP07320 174 aa6.47□□□□□ -1.37
GPNMB-211ENST00000479625 RPL7P18124 248 aaKnown RBP6.47□□□□□ -1.37
GPNMB-211ENST00000479625 EVI2AP22794 236 aa6.47□□□□□ -1.37
GPNMB-211ENST00000479625 CRYBA4P53673 196 aa6.47□□□□□ -1.37
GPNMB-211ENST00000479625 RAB11AP62491 216 aa6.47□□□□□ -1.37
GPNMB-211ENST00000479625 AKR1C1Q04828 323 aa6.47□□□□□ -1.37
GPNMB-211ENST00000479625 STEAP1BQ6NZ63 245 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms