RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 PPIFP30405 207 aaKnown RBP11.67□□□□□ -0.54
HDAC6-220ENST00000477528 C18orf32Q8TCD1 76 aa11.67□□□□□ -0.54
HDAC6-220ENST00000477528 IGKV3-20P01619 116 aa11.67□□□□□ -0.54
HDAC6-220ENST00000477528 LEPP41159 167 aa11.67□□□□□ -0.54
HDAC6-220ENST00000477528 EIF4EBP1Q13541 118 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-220ENST00000477528 BRD3OSQ6XYD6 125 aa11.67□□□□□ -0.54
HDAC6-220ENST00000477528 Q8TAT8 98 aa11.67□□□□□ -0.54
HDAC6-220ENST00000477528 GAGE10A6NGK3 116 aa11.67□□□□□ -0.54
HDAC6-220ENST00000477528 GRNP28799 593 aaKnown RBP11.67□□□□□ -0.54
HDAC6-220ENST00000477528 DUX5Q96PT3 197 aa11.67□□□□□ -0.54
HDAC6-220ENST00000477528 ST20Q9HBF5 79 aa11.67□□□□□ -0.54
HDAC6-220ENST00000477528 IGHV2-70DA0A0C4DH43 119 aa11.66□□□□□ -0.54
HDAC6-220ENST00000477528 D6R8Y8 96 aa11.66□□□□□ -0.54
HDAC6-220ENST00000477528 H3BRN7 92 aa11.66□□□□□ -0.54
HDAC6-220ENST00000477528 DAZAP2Q15038 168 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-220ENST00000477528 FAM74A4Q5TZK3 123 aa11.66□□□□□ -0.54
HDAC6-220ENST00000477528 A8MWP6 167 aa11.66□□□□□ -0.54
HDAC6-220ENST00000477528 ZNF138P52744 262 aa11.66□□□□□ -0.54
HDAC6-220ENST00000477528 COA6Q5JTJ3 125 aaKnown RBP11.66□□□□□ -0.54
HDAC6-220ENST00000477528 TMEM160Q9NX00 188 aa11.66□□□□□ -0.54
HDAC6-220ENST00000477528 COL4A2P08572 1712 aa11.66□□□□□ -0.54
HDAC6-220ENST00000477528 FOXC2Q99958 501 aa11.66□□□□□ -0.54
HDAC6-220ENST00000477528 PRR14LQ5THK1 2151 aa11.66□□□□□ -0.54
HDAC6-220ENST00000477528 LOC102724200A0A096LPH7 203 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-220ENST00000477528 ZNF56Q15929 161 aa11.66□□□□□ -0.54
HDAC6-220ENST00000477528 C9orf139Q6ZV77 190 aa11.66□□□□□ -0.54
HDAC6-220ENST00000477528 FAM223BA6NKX1 122 aa11.65□□□□□ -0.54
HDAC6-220ENST00000477528 INS-IGF2F8WCM5 200 aa11.65□□□□□ -0.54
HDAC6-220ENST00000477528 H3BUX3 64 aa11.65□□□□□ -0.54
HDAC6-220ENST00000477528 FAM223AQ8IWN6 122 aa11.65□□□□□ -0.54
HDAC6-220ENST00000477528 RAX2Q96IS3 184 aa11.65□□□□□ -0.54
HDAC6-220ENST00000477528 C1orf122Q6ZSJ8 110 aa11.65□□□□□ -0.54
HDAC6-220ENST00000477528 POLR3KQ9Y2Y1 108 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-220ENST00000477528 EML5Q05BV3 1969 aa11.65□□□□□ -0.54
HDAC6-220ENST00000477528 B4DSR2 109 aa11.65□□□□□ -0.54
HDAC6-220ENST00000477528 ATP6V0E1O15342 81 aa11.65□□□□□ -0.54
HDAC6-220ENST00000477528 LINC00574Q9H8X3 128 aa11.65□□□□□ -0.54
HDAC6-220ENST00000477528 KMT2EQ8IZD2 1858 aa11.65□□□□□ -0.55
HDAC6-220ENST00000477528 IGFL4Q6B9Z1 124 aa11.65□□□□□ -0.55
HDAC6-220ENST00000477528 MUC6Q6W4X9 2439 aa11.64□□□□□ -0.55
HDAC6-220ENST00000477528 SNAI2O43623 268 aa11.64□□□□□ -0.55
HDAC6-220ENST00000477528 NCKAP5O14513 1909 aa11.64□□□□□ -0.55
HDAC6-220ENST00000477528 FABP2P12104 132 aa11.64□□□□□ -0.55
HDAC6-220ENST00000477528 C2orf88Q9BSF0 95 aa11.64□□□□□ -0.55
HDAC6-220ENST00000477528 PRSS22Q9GZN4 317 aa11.64□□□□□ -0.55
HDAC6-220ENST00000477528 SLAQ13239 276 aa11.64□□□□□ -0.55
HDAC6-220ENST00000477528 FBLN7Q53RD9 439 aa11.64□□□□□ -0.55
HDAC6-220ENST00000477528 OR11H6Q8NGC7 330 aa11.64□□□□□ -0.55
HDAC6-220ENST00000477528 USMG5Q96IX5 58 aa11.64□□□□□ -0.55
HDAC6-220ENST00000477528 SCGB3A1Q96QR1 104 aa11.64□□□□□ -0.55
HDAC6-220ENST00000477528 TMEM238LA0A1B0GVL6 79 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 A6NJY4 79 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 ARMS2P0C7Q2 107 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 RPL24P83731 157 aaKnown RBP11.63□□□□□ -0.55
HDAC6-220ENST00000477528 GLMPQ8WWB7 406 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 IFI27L1Q96BM0 104 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 MED13LQ71F56 2210 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 OR11H12B2RN74 326 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 OR11H1Q8NG94 326 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 OR11H2Q8NH07 326 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 HIST1H4GQ99525 98 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 MS4A6AQ9H2W1 248 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 NPIPB6E9PJ23 425 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 NDUFS8O00217 210 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 Q8NA96 180 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 C20orf144Q9BQM9 153 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 PEF1Q9UBV8 284 aaKnown RBP11.63□□□□□ -0.55
HDAC6-220ENST00000477528 A6NNC1 897 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-220ENST00000477528 OR1N2Q8NGR9 330 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 RAB37Q96AX2 223 aa11.63□□□□□ -0.55
HDAC6-220ENST00000477528 Q6ZWC4 215 aa11.62□□□□□ -0.55
HDAC6-220ENST00000477528 MRPL52Q86TS9 123 aaKnown RBP11.62□□□□□ -0.55
HDAC6-220ENST00000477528 SYS1-DBNDD2H3BUS1 97 aa11.62□□□□□ -0.55
HDAC6-220ENST00000477528 NDPQ00604 133 aa11.62□□□□□ -0.55
HDAC6-220ENST00000477528 ZNF491Q8N8L2 437 aa11.62□□□□□ -0.55
HDAC6-220ENST00000477528 RITA1Q96K30 269 aa11.62□□□□□ -0.55
HDAC6-220ENST00000477528 K7ERU9 68 aa11.62□□□□□ -0.55
HDAC6-220ENST00000477528 IGLV2-23P01705 113 aa11.62□□□□□ -0.55
HDAC6-220ENST00000477528 BDP1A6H8Y1 2624 aa11.62□□□□□ -0.55
HDAC6-220ENST00000477528 IGKV1OR2-108A0A075B7D4 117 aa11.62□□□□□ -0.55
HDAC6-220ENST00000477528 NCR2O95944 276 aa11.62□□□□□ -0.55
HDAC6-220ENST00000477528 SRSF1Q07955 248 aaKnown RBP eCLIP11.62□□□□□ -0.551e-10■■■□□ 15.3
HDAC6-220ENST00000477528 EXPH5Q8NEV8 1989 aa11.62□□□□□ -0.55
HDAC6-220ENST00000477528 CACNA1BQ00975 2339 aa11.61□□□□□ -0.55
HDAC6-220ENST00000477528 EVI2AP22794 236 aa11.61□□□□□ -0.55
HDAC6-220ENST00000477528 PATE2Q6UY27 113 aa11.61□□□□□ -0.55
HDAC6-220ENST00000477528 ERASQ7Z444 233 aa11.61□□□□□ -0.55
HDAC6-220ENST00000477528 TTC9CQ8N5M4 171 aa11.61□□□□□ -0.55
HDAC6-220ENST00000477528 ALKBH7Q9BT30 221 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-220ENST00000477528 TRAV8-6A0A0B4J262 113 aa11.61□□□□□ -0.55
HDAC6-220ENST00000477528 H3BVH4 76 aa11.61□□□□□ -0.55
HDAC6-220ENST00000477528 NUTF2P61970 127 aaKnown RBP11.61□□□□□ -0.55
HDAC6-220ENST00000477528 LTAP01374 205 aa11.61□□□□□ -0.55
HDAC6-220ENST00000477528 OR4X2Q8NGF9 303 aa11.61□□□□□ -0.55
HDAC6-220ENST00000477528 IGLV1-47P01700 117 aa11.61□□□□□ -0.55
HDAC6-220ENST00000477528 LINC00477Q96M19 166 aa11.61□□□□□ -0.55
HDAC6-220ENST00000477528 MORN5Q5VZ52 161 aa11.6□□□□□ -0.55
HDAC6-220ENST00000477528 AMN1Q8IY45 258 aa11.6□□□□□ -0.55
HDAC6-220ENST00000477528 FAM167A-AS1Q96KT0 104 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms