RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 CHAC1Q9BUX1 264 aa3.77□□□□□ -1.81
PTCD3-212ENST00000477520 RTL8AQ9BWD3 113 aa3.77□□□□□ -1.81
PTCD3-212ENST00000477520 ZMAT4Q9H898 229 aa3.77□□□□□ -1.81
PTCD3-212ENST00000477520 NGBQ9NPG2 151 aa3.77□□□□□ -1.81
PTCD3-212ENST00000477520 ZNF355PQ9NSJ1 428 aa3.77□□□□□ -1.81
PTCD3-212ENST00000477520 ONECUT1Q9UBC0 465 aa3.77□□□□□ -1.81
PTCD3-212ENST00000477520 HILPDAQ9Y5L2 63 aa3.77□□□□□ -1.81
PTCD3-212ENST00000477520 MPC1Q9Y5U8 109 aa3.77□□□□□ -1.81
PTCD3-212ENST00000477520 IGKV3D-11A0A0A0MRZ8 115 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 A0A1B0GUT8 65 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 OOEPA6NGQ2 149 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 LINC01546A6NGU7 62 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 SMIM9A6NGZ8 99 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 PRSS29PA6NIE9 313 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 SRRM4A7MD48 611 aaKnown RBP3.76□□□□□ -1.81
PTCD3-212ENST00000477520 NPIPB5A8MRT5 1133 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 PEX7O00628 323 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 RRHO14718 337 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 APOHP02749 345 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-212ENST00000477520 FRMD6-AS1P0C7T7 363 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 NHLRC4P0CG21 123 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-212ENST00000477520 CCL4P13236 92 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 CAMPP49913 170 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 SUB1P53999 127 aaKnown RBP eCLIP3.76□□□□□ -1.81
PTCD3-212ENST00000477520 EIF4EBP1Q13541 118 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-212ENST00000477520 FXYD3Q14802 87 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 OR1C1Q15619 314 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 TWIST1Q15672 202 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 RSPO1Q2MKA7 263 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-212ENST00000477520 GDF5OSQ5U4N7 250 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 MIC13Q5XKP0 118 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 ZNF493Q6ZR52 646 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 SH2D6Q7Z4S9 175 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 RBMXL3Q8N7X1 1067 aaKnown RBP3.76□□□□□ -1.81
PTCD3-212ENST00000477520 ZNRF2Q8NHG8 242 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 NABP1Q96AH0 204 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 RASL11BQ9BPW5 248 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 NABP2Q9BQ15 211 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 EMC6Q9BV81 110 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 FBXL15Q9H469 300 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 ENY2Q9NPA8 101 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 NHP2Q9NX24 153 aaKnown RBP3.76□□□□□ -1.81
PTCD3-212ENST00000477520 B4GALT7Q9UBV7 327 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 CSDC2Q9Y534 153 aaKnown RBP3.76□□□□□ -1.81
PTCD3-212ENST00000477520 U3KQK5 164 aa3.76□□□□□ -1.81
PTCD3-212ENST00000477520 SDK2Q58EX2 2172 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 ANKRD11Q6UB99 2663 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-212ENST00000477520 ACACBO00763 2458 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 TRBV25-1A0A075B6N4 114 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 MYMXA0A1B0GTQ4 84 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 FAM240AA0A1B0GVK7 77 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 C19orf71A6NCJ1 209 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 LINC01549A6NIU2 74 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 SNAI2O43623 268 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 CRYGBP07316 175 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 CDAP32320 146 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 DUTP33316 252 aaKnown RBP3.75□□□□□ -1.81
PTCD3-212ENST00000477520 FXYD2P54710 66 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 MEIG1Q5JSS6 88 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 UTF1Q5T230 341 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 AMTNQ6UX39 209 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 ZNF497Q6ZNH5 498 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 TMEM219Q86XT9 240 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 OR4C13Q8NGP0 309 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 OSR1Q8TAX0 266 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-212ENST00000477520 MYOZ3Q8TDC0 251 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 ZNF524Q96C55 264 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 MMABQ96EY8 250 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-212ENST00000477520 SGK494Q96LW2 274 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 ZNF488Q96MN9 340 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 ZNF714Q96N38 554 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 SCNM1Q9BWG6 230 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 TCF19Q9Y242 345 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 CHD8Q9HCK8 2581 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 FER1L5A0AVI2 2057 aa3.75□□□□□ -1.81
PTCD3-212ENST00000477520 COL27A1Q8IZC6 1860 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-212ENST00000477520 KIAA2026Q5HYC2 2103 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 USP34Q70CQ2 3546 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 A4D1N5 150 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 NCBP2LA6PVI3 153 aaKnown RBP3.74□□□□□ -1.81
PTCD3-212ENST00000477520 F8WDY8 70 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 DPM2O94777 84 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 ACTL6BO94805 426 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 TGFAP01135 160 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 NPYP01303 97 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 IGKCP01834 107 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 ACYP1P07311 99 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 IGF2RP11717 2491 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 ORM2P19652 201 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 GATA3P23771 443 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 PLNP26678 52 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 RPL13AP40429 203 aaKnown RBP3.74□□□□□ -1.81
PTCD3-212ENST00000477520 NMUP48645 174 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 UCNP55089 124 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 RPS16P62249 146 aaKnown RBP3.74□□□□□ -1.81
PTCD3-212ENST00000477520 EDDM3AQ14507 147 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 DAZAP2Q15038 168 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-212ENST00000477520 IZUMO4Q1ZYL8 232 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 ZNF766Q5HY98 468 aa3.74□□□□□ -1.81
PTCD3-212ENST00000477520 LINC00696Q6ZRV3 163 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms