RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 VSIG2Q96IQ7 327 aa8.76□□□□□ -1.01
TRAPPC12-216ENST00000469400 SHANK2-AS3Q9BTD1 123 aa8.76□□□□□ -1.01
TRAPPC12-216ENST00000469400 TMPRSS5Q9H3S3 457 aa8.76□□□□□ -1.01
TRAPPC12-216ENST00000469400 VCX3AQ9NNX9 186 aa8.76□□□□□ -1.01
TRAPPC12-216ENST00000469400 A0A087WTM6 91 aa8.75□□□□□ -1.01
TRAPPC12-216ENST00000469400 PRSS46E5RG02 174 aa8.75□□□□□ -1.01
TRAPPC12-216ENST00000469400 FAM229AH3BQW9 127 aa8.75□□□□□ -1.01
TRAPPC12-216ENST00000469400 PITX3O75364 302 aa8.75□□□□□ -1.01
TRAPPC12-216ENST00000469400 OR51S1Q8NGJ8 323 aa8.75□□□□□ -1.01
TRAPPC12-216ENST00000469400 RPUSD4Q96CM3 377 aaKnown RBP8.75□□□□□ -1.01
TRAPPC12-216ENST00000469400 PRRT1Q99946 306 aa8.75□□□□□ -1.01
TRAPPC12-216ENST00000469400 C20orf144Q9BQM9 153 aa8.75□□□□□ -1.01
TRAPPC12-216ENST00000469400 A0A087X0K7 114 aa8.74□□□□□ -1.01
TRAPPC12-216ENST00000469400 SNURFLB1AK76 121 aa8.74□□□□□ -1.01
TRAPPC12-216ENST00000469400 AKAIN1P0CW23 69 aa8.74□□□□□ -1.01
TRAPPC12-216ENST00000469400 HAMPP81172 84 aa8.74□□□□□ -1.01
TRAPPC12-216ENST00000469400 AKR1C1Q04828 323 aa8.74□□□□□ -1.01
TRAPPC12-216ENST00000469400 GFI1BQ5VTD9 330 aa8.74□□□□□ -1.01
TRAPPC12-216ENST00000469400 Q6ZSN1 163 aa8.74□□□□□ -1.01
TRAPPC12-216ENST00000469400 LRRC20Q8TCA0 184 aa8.74□□□□□ -1.01
TRAPPC12-216ENST00000469400 PARD6GQ9BYG4 376 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC12-216ENST00000469400 HIGD1AQ9Y241 93 aa8.74□□□□□ -1.01
TRAPPC12-216ENST00000469400 HYPMO75409 117 aa8.73□□□□□ -1.01
TRAPPC12-216ENST00000469400 NXPH4O95158 308 aa8.73□□□□□ -1.01
TRAPPC12-216ENST00000469400 GCSHP23434 173 aa8.73□□□□□ -1.01
TRAPPC12-216ENST00000469400 RAP2BP61225 183 aa8.73□□□□□ -1.01
TRAPPC12-216ENST00000469400 SRPXP78539 464 aa8.73□□□□□ -1.01
TRAPPC12-216ENST00000469400 MRPS10P82664 201 aaKnown RBP8.73□□□□□ -1.01
TRAPPC12-216ENST00000469400 Q6ZTI0 123 aa8.73□□□□□ -1.01
TRAPPC12-216ENST00000469400 TMED4Q7Z7H5 227 aa8.73□□□□□ -1.01
TRAPPC12-216ENST00000469400 NFE4Q86UQ8 179 aa8.73□□□□□ -1.01
TRAPPC12-216ENST00000469400 CLVS1Q8IUQ0 354 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC12-216ENST00000469400 UBR4Q5T4S7 5183 aa8.72□□□□□ -1.01
TRAPPC12-216ENST00000469400 A6NHS1 94 aa8.72□□□□□ -1.01
TRAPPC12-216ENST00000469400 IL5P05113 134 aa8.72□□□□□ -1.01
TRAPPC12-216ENST00000469400 ANXA3P12429 323 aa8.72□□□□□ -1.01
TRAPPC12-216ENST00000469400 RPP30P78346 268 aaKnown RBP8.72□□□□□ -1.01
TRAPPC12-216ENST00000469400 DAZ2Q13117 558 aaKnown RBP8.72□□□□□ -1.01
TRAPPC12-216ENST00000469400 CYP2G1PQ6ZSU1 146 aa8.72□□□□□ -1.01
TRAPPC12-216ENST00000469400 ACOT7LQ6ZUV0 252 aa8.72□□□□□ -1.01
TRAPPC12-216ENST00000469400 SMIM4Q8WVI0 70 aa8.72□□□□□ -1.01
TRAPPC12-216ENST00000469400 SCGB3A2Q96PL1 93 aa8.72□□□□□ -1.01
TRAPPC12-216ENST00000469400 CIB3Q96Q77 187 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC12-216ENST00000469400 MIXL1Q9H2W2 232 aa8.72□□□□□ -1.01
TRAPPC12-216ENST00000469400 NDUFA13Q9P0J0 144 aa8.72□□□□□ -1.01
TRAPPC12-216ENST00000469400 TRGV2A0A075B6R0 118 aa8.71□□□□□ -1.02
TRAPPC12-216ENST00000469400 MED6O75586 246 aa8.71□□□□□ -1.02
TRAPPC12-216ENST00000469400 OR5G3P0C626 314 aa8.71□□□□□ -1.02
TRAPPC12-216ENST00000469400 PLP1P60201 277 aa8.71□□□□□ -1.02
TRAPPC12-216ENST00000469400 SPANXN5Q5MJ07 72 aa8.71□□□□□ -1.02
TRAPPC12-216ENST00000469400 CCDC190Q86UF4 302 aa8.71□□□□□ -1.02
TRAPPC12-216ENST00000469400 SCP2D1Q9UJQ7 156 aa8.71□□□□□ -1.02
TRAPPC12-216ENST00000469400 DUXBA0A1W2PPF3 345 aa8.7□□□□□ -1.02
TRAPPC12-216ENST00000469400 PMS2P5A8MQ11 134 aa8.7□□□□□ -1.02
TRAPPC12-216ENST00000469400 PRAC2D3DTV9 90 aa8.7□□□□□ -1.02
TRAPPC12-216ENST00000469400 J3KRW8 73 aa8.7□□□□□ -1.02
TRAPPC12-216ENST00000469400 WRBO00258 174 aa8.7□□□□□ -1.02
TRAPPC12-216ENST00000469400 MRPS12O15235 138 aaKnown RBP8.7□□□□□ -1.02
TRAPPC12-216ENST00000469400 SYNGR2O43760 224 aa8.7□□□□□ -1.02
TRAPPC12-216ENST00000469400 LINC00869P0C866 280 aa8.7□□□□□ -1.02
TRAPPC12-216ENST00000469400 SLC25A6P12236 298 aa8.7□□□□□ -1.02
TRAPPC12-216ENST00000469400 ZNF331Q9NQX6 463 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC12-216ENST00000469400 TRAV12-3A0A0B4J271 114 aa8.69□□□□□ -1.02
TRAPPC12-216ENST00000469400 PIGBOS1A0A0B4J2F0 54 aa8.69□□□□□ -1.02
TRAPPC12-216ENST00000469400 ANKRD20A5PA0PJZ0 165 aa8.69□□□□□ -1.02
TRAPPC12-216ENST00000469400 SMCO3A2RU48 225 aa8.69□□□□□ -1.02
TRAPPC12-216ENST00000469400 H3BP45 60 aa8.69□□□□□ -1.02
TRAPPC12-216ENST00000469400 SNRPCP09234 159 aaKnown RBP8.69□□□□□ -1.02
TRAPPC12-216ENST00000469400 CXCL2P19875 107 aa8.69□□□□□ -1.02
TRAPPC12-216ENST00000469400 ANXA7P20073 488 aaKnown RBP8.69□□□□□ -1.02
TRAPPC12-216ENST00000469400 CTF1Q16619 201 aa8.69□□□□□ -1.02
TRAPPC12-216ENST00000469400 PYGO2Q9BRQ0 406 aa8.69□□□□□ -1.02
TRAPPC12-216ENST00000469400 NAA50Q9GZZ1 169 aaKnown RBP8.69□□□□□ -1.02
TRAPPC12-216ENST00000469400 GSN-AS1Q9NRJ2 163 aa8.69□□□□□ -1.02
TRAPPC12-216ENST00000469400 MCUBQ9NWR8 336 aa8.69□□□□□ -1.02
TRAPPC12-216ENST00000469400 ICOSQ9Y6W8 199 aa8.69□□□□□ -1.02
TRAPPC12-216ENST00000469400 TRAV9-2A0A087WT02 112 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 LINC00854A0A1B0GVQ3 168 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 CTDSP2O14595 271 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 CTDSPLO15194 276 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 RGS5O15539 181 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 PAX4O43316 350 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 ZNF324O75467 553 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 CT45A10P0DMU9 189 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 LYPD5Q6UWN5 251 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 LCN15Q6UWW0 184 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 PATE2Q6UY27 113 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 C11orf72Q8NBR9 251 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 ZNF431Q8TF32 576 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 SLC50A1Q9BRV3 221 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 ARV1Q9H2C2 271 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 MSRB1Q9NZV6 116 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 FUT9Q9Y231 359 aa8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 STRAPQ9Y3F4 350 aaKnown RBP8.68□□□□□ -1.02
TRAPPC12-216ENST00000469400 TRGV1A0A0A0MS02 117 aa8.67□□□□□ -1.02
TRAPPC12-216ENST00000469400 LEPP41159 167 aa8.67□□□□□ -1.02
TRAPPC12-216ENST00000469400 SELENOTP62341 195 aa8.67□□□□□ -1.02
TRAPPC12-216ENST00000469400 IL18Q14116 193 aa8.67□□□□□ -1.02
TRAPPC12-216ENST00000469400 S100A7AQ86SG5 101 aa8.67□□□□□ -1.02
TRAPPC12-216ENST00000469400 LRTM2Q8N967 370 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms