RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 UBE2G1P62253 170 aa16.94■□□□□ 0.3
PDLIM2-216ENST00000464275 ANKRD17O75179 2603 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-216ENST00000464275 TRAV41A0A0B4J266 112 aa16.93■□□□□ 0.3
PDLIM2-216ENST00000464275 KRTAP10-9P60411 292 aa16.93■□□□□ 0.3
PDLIM2-216ENST00000464275 LOXL1Q08397 574 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-216ENST00000464275 C19orf54Q5BKX5 351 aa16.93■□□□□ 0.3
PDLIM2-216ENST00000464275 ATP5L2Q7Z4Y8 100 aa16.93■□□□□ 0.3
PDLIM2-216ENST00000464275 LRRC75A-AS1Q8N1F1 130 aa16.93■□□□□ 0.3
PDLIM2-216ENST00000464275 KCNS1Q96KK3 526 aa16.93■□□□□ 0.3
PDLIM2-216ENST00000464275 TRAV34A0A0B4J273 112 aa16.93■□□□□ 0.3
PDLIM2-216ENST00000464275 M0QZK8 103 aa16.93■□□□□ 0.3
PDLIM2-216ENST00000464275 MRPS12O15235 138 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-216ENST00000464275 IGLC2P0DOY2 106 aa16.93■□□□□ 0.3
PDLIM2-216ENST00000464275 LY6EQ16553 131 aa16.93■□□□□ 0.3
PDLIM2-216ENST00000464275 TRBV19A0A075B6N1 114 aa16.92■□□□□ 0.3
PDLIM2-216ENST00000464275 APCSP02743 223 aa16.92■□□□□ 0.3
PDLIM2-216ENST00000464275 GPX1P07203 203 aa16.92■□□□□ 0.3
PDLIM2-216ENST00000464275 S100A7P31151 101 aa16.92■□□□□ 0.3
PDLIM2-216ENST00000464275 EEF1AKMT3Q96AZ1 226 aa16.92■□□□□ 0.3
PDLIM2-216ENST00000464275 TCRAP04437 139 aa16.91■□□□□ 0.3
PDLIM2-216ENST00000464275 TCL1AP56279 114 aa16.91■□□□□ 0.3
PDLIM2-216ENST00000464275 DEFB113Q30KQ7 82 aa16.91■□□□□ 0.3
PDLIM2-216ENST00000464275 CT83Q5H943 113 aa16.91■□□□□ 0.3
PDLIM2-216ENST00000464275 TOMM20LQ6UXN7 152 aa16.91■□□□□ 0.3
PDLIM2-216ENST00000464275 LYPD1Q8N2G4 141 aa16.91■□□□□ 0.3
PDLIM2-216ENST00000464275 TSKUQ8WUA8 353 aa16.91■□□□□ 0.3
PDLIM2-216ENST00000464275 FMC1Q96HJ9 113 aa16.91■□□□□ 0.3
PDLIM2-216ENST00000464275 RPH3ALQ9UNE2 315 aa16.91■□□□□ 0.3
PDLIM2-216ENST00000464275 UTP20O75691 2785 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-216ENST00000464275 BMPR1BO00238 502 aa16.91■□□□□ 0.3
PDLIM2-216ENST00000464275 GPR183P32249 361 aa16.91■□□□□ 0.3
PDLIM2-216ENST00000464275 BCL6BQ8N143 479 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-216ENST00000464275 RABAC1Q9UI14 185 aa16.91■□□□□ 0.3
PDLIM2-216ENST00000464275 TRBV7-1A0A0A6YYK4 115 aa16.9■□□□□ 0.3
PDLIM2-216ENST00000464275 A0A1B0GV90 55 aa16.9■□□□□ 0.3
PDLIM2-216ENST00000464275 ZNF253O75346 499 aa16.9■□□□□ 0.3
PDLIM2-216ENST00000464275 FRMD6-AS1P0C7T7 363 aa16.9■□□□□ 0.3
PDLIM2-216ENST00000464275 MRPL54Q6P161 138 aaKnown RBP16.9■□□□□ 0.3
PDLIM2-216ENST00000464275 NUDT10Q8NFP7 164 aa16.9■□□□□ 0.3
PDLIM2-216ENST00000464275 NUDT11Q96G61 164 aa16.9■□□□□ 0.3
PDLIM2-216ENST00000464275 GPR82Q96P67 336 aa16.9■□□□□ 0.3
PDLIM2-216ENST00000464275 IGF1P05019 195 aa16.89■□□□□ 0.3
PDLIM2-216ENST00000464275 CLEC3BP05452 202 aa16.89■□□□□ 0.3
PDLIM2-216ENST00000464275 NHLRC2Q8NBF2 726 aa16.89■□□□□ 0.3
PDLIM2-216ENST00000464275 ZNF414Q96IQ9 312 aa16.89■□□□□ 0.3
PDLIM2-216ENST00000464275 ZNF492Q9P255 531 aa16.89■□□□□ 0.3
PDLIM2-216ENST00000464275 M0R143 59 aa16.89■□□□□ 0.29
PDLIM2-216ENST00000464275 IGHG2P01859 326 aa16.89■□□□□ 0.29
PDLIM2-216ENST00000464275 CCDC140Q96MF4 163 aa16.89■□□□□ 0.29
PDLIM2-216ENST00000464275 ATP6V0BQ99437 205 aa16.89■□□□□ 0.29
PDLIM2-216ENST00000464275 FAM223BA6NKX1 122 aa16.88■□□□□ 0.29
PDLIM2-216ENST00000464275 RNF223E7ERA6 249 aa16.88■□□□□ 0.29
PDLIM2-216ENST00000464275 TGFAP01135 160 aa16.88■□□□□ 0.29
PDLIM2-216ENST00000464275 SRIP30626 198 aa16.88■□□□□ 0.29
PDLIM2-216ENST00000464275 ATP5G2Q06055 141 aa16.88■□□□□ 0.29
PDLIM2-216ENST00000464275 FAM223AQ8IWN6 122 aa16.88■□□□□ 0.29
PDLIM2-216ENST00000464275 EXOC3-AS1Q8N2X6 119 aa16.88■□□□□ 0.29
PDLIM2-216ENST00000464275 SPINK4O60575 86 aa16.88■□□□□ 0.29
PDLIM2-216ENST00000464275 PDE6HQ13956 83 aa16.88■□□□□ 0.29
PDLIM2-216ENST00000464275 OR4B1Q8NGF8 309 aa16.88■□□□□ 0.29
PDLIM2-216ENST00000464275 C17orf77Q96MU5 243 aa16.88■□□□□ 0.29
PDLIM2-216ENST00000464275 VAMP8Q9BV40 100 aa16.88■□□□□ 0.29
PDLIM2-216ENST00000464275 ZNF324O75467 553 aaPredicted RBP16.87■□□□□ 0.29
PDLIM2-216ENST00000464275 RPL7P18124 248 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-216ENST00000464275 CLEC19AQ6UXS0 136 aa16.87■□□□□ 0.29
PDLIM2-216ENST00000464275 SIGLEC15Q6ZMC9 328 aa16.87■□□□□ 0.29
PDLIM2-216ENST00000464275 NUP35Q8NFH5 326 aa16.87■□□□□ 0.29
PDLIM2-216ENST00000464275 MLST8Q9BVC4 326 aa16.87■□□□□ 0.29
PDLIM2-216ENST00000464275 F2Z2F3 143 aa16.86■□□□□ 0.29
PDLIM2-216ENST00000464275 AMTP48728 403 aa16.86■□□□□ 0.29
PDLIM2-216ENST00000464275 SLC35B1P78383 322 aa16.86■□□□□ 0.29
PDLIM2-216ENST00000464275 KLF5Q13887 457 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-216ENST00000464275 LINC00527Q9UJ94 153 aa16.86■□□□□ 0.29
PDLIM2-216ENST00000464275 LRRK2Q5S007 2527 aa16.86■□□□□ 0.29
PDLIM2-216ENST00000464275 A0A1W2PS18 150 aa16.86■□□□□ 0.29
PDLIM2-216ENST00000464275 BRI3O95415 125 aa16.86■□□□□ 0.29
PDLIM2-216ENST00000464275 LTAP01374 205 aa16.86■□□□□ 0.29
PDLIM2-216ENST00000464275 FAM162BQ5T6X4 162 aa16.86■□□□□ 0.29
PDLIM2-216ENST00000464275 MAPK1IP1LQ8NDC0 245 aa16.86■□□□□ 0.29
PDLIM2-216ENST00000464275 MIEN1Q9BRT3 115 aa16.86■□□□□ 0.29
PDLIM2-216ENST00000464275 ZFAND3Q9H8U3 227 aa16.86■□□□□ 0.29
PDLIM2-216ENST00000464275 CRYBG3Q68DQ2 2970 aa16.85■□□□□ 0.29
PDLIM2-216ENST00000464275 TRBV6-1A0A0K0K1D8 114 aa16.85■□□□□ 0.29
PDLIM2-216ENST00000464275 FAM231BA6NCW3 169 aa16.85■□□□□ 0.29
PDLIM2-216ENST00000464275 H3BUA1 57 aa16.85■□□□□ 0.29
PDLIM2-216ENST00000464275 RAB4AP20338 218 aa16.85■□□□□ 0.29
PDLIM2-216ENST00000464275 Q5PR19 223 aa16.85■□□□□ 0.29
PDLIM2-216ENST00000464275 SGK494Q96LW2 274 aa16.85■□□□□ 0.29
PDLIM2-216ENST00000464275 GFRA4Q9GZZ7 299 aa16.85■□□□□ 0.29
PDLIM2-216ENST00000464275 NRN1Q9NPD7 142 aa16.85■□□□□ 0.29
PDLIM2-216ENST00000464275 VPS13CQ709C8 3753 aa16.84■□□□□ 0.29
PDLIM2-216ENST00000464275 A8MWL6 223 aa16.84■□□□□ 0.29
PDLIM2-216ENST00000464275 TRGV3P03979 118 aa16.84■□□□□ 0.29
PDLIM2-216ENST00000464275 IGHV4-31P0DP07 118 aa16.84■□□□□ 0.29
PDLIM2-216ENST00000464275 CHD6Q8TD26 2715 aa16.84■□□□□ 0.29
PDLIM2-216ENST00000464275 KMT2BQ9UMN6 2715 aaPredicted RBP16.84■□□□□ 0.29
PDLIM2-216ENST00000464275 CA1P00915 261 aaPredicted RBP16.84■□□□□ 0.29
PDLIM2-216ENST00000464275 RAB9AP51151 201 aa16.84■□□□□ 0.29
PDLIM2-216ENST00000464275 KIAA1644Q3SXP7 199 aa16.84■□□□□ 0.29
PDLIM2-216ENST00000464275 NEU1Q99519 415 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms