RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CREBL2O60519 120 aaPredicted RBP2.23□□□□□ -2.05
ITGB1-208ENST00000464001 SHBGP04278 402 aa2.23□□□□□ -2.05
ITGB1-208ENST00000464001 GZMBP10144 247 aa2.23□□□□□ -2.05
ITGB1-208ENST00000464001 CRYGAP11844 174 aa2.23□□□□□ -2.05
ITGB1-208ENST00000464001 AQP4P55087 323 aa2.23□□□□□ -2.05
ITGB1-208ENST00000464001 SNRPD3P62318 126 aaKnown RBP2.23□□□□□ -2.05
ITGB1-208ENST00000464001 QRFPP83859 136 aa2.23□□□□□ -2.05
ITGB1-208ENST00000464001 KPRPQ5T749 579 aaPredicted RBP2.23□□□□□ -2.05
ITGB1-208ENST00000464001 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.23□□□□□ -2.05
ITGB1-208ENST00000464001 APCDD1LQ8NCL9 501 aa2.23□□□□□ -2.05
ITGB1-208ENST00000464001 OR5D14Q8NGL3 314 aa2.23□□□□□ -2.05
ITGB1-208ENST00000464001 DEDD2Q8WXF8 326 aa2.23□□□□□ -2.05
ITGB1-208ENST00000464001 AQP3Q92482 292 aa2.23□□□□□ -2.05
ITGB1-208ENST00000464001 MAGOHBQ96A72 148 aaKnown RBP2.23□□□□□ -2.05
ITGB1-208ENST00000464001 PSMG3Q9BT73 122 aaPredicted RBP2.23□□□□□ -2.05
ITGB1-208ENST00000464001 SOX21Q9Y651 276 aaPredicted RBP2.23□□□□□ -2.05
ITGB1-208ENST00000464001 MINOS1-NBL1R4GNA1 71 aa2.23□□□□□ -2.05
ITGB1-208ENST00000464001 STRCQ7RTU9 1775 aa2.23□□□□□ -2.05
ITGB1-208ENST00000464001 TTC37Q6PGP7 1564 aa2.23□□□□□ -2.05
ITGB1-208ENST00000464001 RB1CC1Q8TDY2 1594 aa2.23□□□□□ -2.05
ITGB1-208ENST00000464001 SLIT3O75094 1523 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 NISCHQ9Y2I1 1504 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 USP54Q70EL1 1684 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 COL1A1P02452 1464 aaPredicted RBP2.22□□□□□ -2.05
ITGB1-208ENST00000464001 TRAV27A0A087WT01 109 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 OR2T8A6NH00 312 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 C11orf86A6NJI1 115 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 CLPSP04118 112 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 APODP05090 189 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 CD24P25063 80 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 GUCA1AP43080 201 aaPredicted RBP2.22□□□□□ -2.05
ITGB1-208ENST00000464001 PLGLB1Q02325 96 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 FAM27BQ5VT28 67 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 LCN15Q6UWW0 184 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 RPS19BP1Q86WX3 136 aaKnown RBP2.22□□□□□ -2.05
ITGB1-208ENST00000464001 LYPD6Q86Y78 171 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 DYNAPQ8N1N2 210 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 LINC00311Q8N616 119 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 OR5D16Q8NGK9 328 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 COMMD3Q9UBI1 195 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 BOKQ9UMX3 212 aaPredicted RBP2.22□□□□□ -2.05
ITGB1-208ENST00000464001 S4R3C0 116 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 KDM6AO15550 1401 aaPredicted RBP2.22□□□□□ -2.05
ITGB1-208ENST00000464001 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.22□□□□□ -2.05
ITGB1-208ENST00000464001 SCN3AQ9NY46 2000 aa2.22□□□□□ -2.05
ITGB1-208ENST00000464001 COL11A1P12107 1806 aaPredicted RBP2.21□□□□□ -2.05
ITGB1-208ENST00000464001 MYOM2P54296 1465 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 RAPGEF2Q9Y4G8 1499 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 IGKV1D-17A0A075B6S4 117 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 TRAV7A0A075B6U4 112 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 A0A1B0GU33 70 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 H3BPC8 53 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 CCDC179H3BU77 68 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 SNAPC5O75971 98 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 TCL1BO95988 128 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 TRGC1P0CF51 173 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 HLA-DRB4P13762 266 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 GNG2P59768 71 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 PPP3R1P63098 170 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 RELAQ04206 551 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 KRTAP25-1Q3LHN0 102 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 LYZL1Q6UWQ5 148 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 RNF182Q8N6D2 247 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 OR10AC1Q8NH08 325 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 PP6455Q8WZ26 134 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 DIRC1Q969H9 104 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 MRPS24Q96EL2 167 aaKnown RBP2.21□□□□□ -2.06
ITGB1-208ENST00000464001 TMEM191AQ9H0A3 160 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 TXNL4BQ9NX01 149 aaKnown RBP2.21□□□□□ -2.06
ITGB1-208ENST00000464001 HLA-DRB4X5D2U9 266 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 COL1A2P08123 1366 aa2.21□□□□□ -2.06
ITGB1-208ENST00000464001 PZPP20742 1482 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 PLXNA4Q9HCM2 1894 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 RGS12O14924 1447 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 IGHV3OR16-8A0A075B7F1 116 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 TRGV5A0A0B4J1U4 118 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 A0A0G2JMM0 328 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 A0A1B0GVG6 124 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 A0A1W2PPB8 328 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 C7orf66A4D0T2 115 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 TMEM235A6NFC5 223 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 KIR3DP1A8MWS1 328 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 SDCBPO00560 298 aaPredicted RBP2.2□□□□□ -2.06
ITGB1-208ENST00000464001 UQCRQO14949 82 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 TIMM17BO60830 172 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 HBDP02042 147 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 AKAIN1P0CW23 69 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 COL8A2P25067 703 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 GNG4P50150 75 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 MYL5Q02045 173 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 KLRD1Q13241 179 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 CDK5R1Q15078 307 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 TMEM155Q4W5P6 130 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 MEIG1Q5JSS6 88 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 TEX261Q6UWH6 196 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 TMEM91Q6ZNR0 172 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 TEN1Q86WV5 123 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 OR4C12Q96R67 309 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 FKBP11Q9NYL4 201 aa2.2□□□□□ -2.06
ITGB1-208ENST00000464001 ZFP30Q9Y2G7 519 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms