RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.76□□□□□ -1.17
PTPRD-207ENST00000463477 CMTM2Q8TAZ6 248 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 OTORQ9NRC9 128 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 TP53TG3Q9ULZ0 132 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 TMEM89A2RUT3 159 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 PGPA6NDG6 321 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 HOXA3O43365 443 aaPredicted RBP7.75□□□□□ -1.17
PTPRD-207ENST00000463477 CNIH1O95406 144 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 LTAP01374 205 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 SAA4P35542 130 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 LINC00310P59036 64 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 FXYD3Q14802 87 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 ZNF562Q6V9R5 426 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 ZNF600Q6ZNG1 722 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 ATP5L2Q7Z4Y8 100 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 LYPD1Q8N2G4 141 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 NUDT10Q8NFP7 164 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 TSKUQ8WUA8 353 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 NUDT11Q96G61 164 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 SLC25A39Q9BZJ4 359 aaPredicted RBP7.75□□□□□ -1.17
PTPRD-207ENST00000463477 NAT8BQ9UHF3 227 aa7.75□□□□□ -1.17
PTPRD-207ENST00000463477 FAM231BA6NCW3 169 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 H3BRN7 92 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 TCRAP04437 139 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 RD3LP0DJH9 198 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 DDTP30046 118 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 DEFA6Q01524 100 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 USF2Q15853 346 aaPredicted RBP7.74□□□□□ -1.17
PTPRD-207ENST00000463477 KLK9Q2XQG4 91 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 C19orf35Q6ZS72 473 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 TTC9CQ8N5M4 171 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 AJUBAQ96IF1 538 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 LINC00479Q96M42 142 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 DUX5Q96PT3 197 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 SHANK2-AS3Q9BTD1 123 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 PRSS22Q9GZN4 317 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 MEGF9Q9H1U4 602 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 Q9H3A6 140 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 KLK9Q9UKQ9 250 aa7.74□□□□□ -1.17
PTPRD-207ENST00000463477 TBL2Q9Y4P3 447 aaKnown RBP7.74□□□□□ -1.17
PTPRD-207ENST00000463477 IGLV11-55A0A075B6I3 123 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 A0A1W2PRD5 423 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 A0A1W2PRF3 423 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 A0A1W2PRM7 423 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 WI2-2373I1.2A0A1W2PRP0 233 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 C19orf71A6NCJ1 209 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 NUPR1O60356 82 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 APELAP0DMC3 54 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 LYZP61626 148 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 FAM209BQ5JX69 171 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 REC114Q7Z4M0 266 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 LHFPL4Q7Z7J7 247 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 ARL6IP6Q8N6S5 226 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 BLNKQ8WV28 456 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 MS4A10Q96PG2 267 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 GFRA4Q9GZZ7 299 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 ZNF331Q9NQX6 463 aaPredicted RBP7.73□□□□□ -1.17
PTPRD-207ENST00000463477 SERTAD4Q9NUC0 356 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 TRAV34A0A0B4J273 112 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 GRIFINA4D1Z8 144 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 SERF1AO75920 110 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 OR2J3O76001 311 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 FCGR2BP31994 310 aaPredicted RBP7.73□□□□□ -1.17
PTPRD-207ENST00000463477 BRS3P32247 399 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 GNG5P63218 68 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 C9orf152Q5JTZ5 239 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 BPIFA4PQ86YQ2 179 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 ZNF491Q8N8L2 437 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 NUP35Q8NFH5 326 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 ARPC1AQ92747 370 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 ZNF586Q9NXT0 402 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 HILPDAQ9Y5L2 63 aa7.73□□□□□ -1.17
PTPRD-207ENST00000463477 IGHV3-21A0A0B4J1V1 117 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 A0A1B0GUS0 222 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 A0A1B0GXF2 115 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 A8MWL6 223 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 A8MWP6 167 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 NPIPB6E9PJ23 425 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 BMPR1BO00238 502 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 IGHV4-59P01825 116 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 FRMD6-AS1P0C7T7 363 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 IGLC2P0DOY2 106 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 MFAP4P55083 255 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 PDE6HQ13956 83 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 ASPHD1Q5U4P2 390 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 BAGE3Q86Y29 109 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 ZNF664Q8N3J9 261 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 NHLRC2Q8NBF2 726 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 OR4B1Q8NGF8 309 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 FANCD2OSQ96PS1 177 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 RPP21Q9H633 154 aaKnown RBP7.72□□□□□ -1.17
PTPRD-207ENST00000463477 GNB4Q9HAV0 340 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 THYN1Q9P016 225 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 NAGKQ9UJ70 344 aa7.72□□□□□ -1.17
PTPRD-207ENST00000463477 TENM1Q9UKZ4 2725 aa7.71□□□□□ -1.17
PTPRD-207ENST00000463477 TRBV19A0A075B6N1 114 aa7.71□□□□□ -1.18
PTPRD-207ENST00000463477 FAM181BA6NEQ2 426 aa7.71□□□□□ -1.18
PTPRD-207ENST00000463477 MRPS12O15235 138 aaKnown RBP7.71□□□□□ -1.18
PTPRD-207ENST00000463477 SCGB2A1O75556 95 aa7.71□□□□□ -1.18
PTPRD-207ENST00000463477 APCSP02743 223 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms