RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 FAM162BQ5T6X4 162 aa13.31□□□□□ -0.28
ACTB-207ENST00000462494 ZNF562Q6V9R5 426 aa13.31□□□□□ -0.28
ACTB-207ENST00000462494 LYPD1Q8N2G4 141 aa13.31□□□□□ -0.28
ACTB-207ENST00000462494 NEU4Q8WWR8 484 aaPredicted RBP13.31□□□□□ -0.28
ACTB-207ENST00000462494 MRPS12O15235 138 aaKnown RBP13.3□□□□□ -0.28
ACTB-207ENST00000462494 ARMS2P0C7Q2 107 aa13.3□□□□□ -0.28
ACTB-207ENST00000462494 ZNF138P52744 262 aa13.3□□□□□ -0.28
ACTB-207ENST00000462494 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.29□□□□□ -0.28
ACTB-207ENST00000462494 IGHV1-24A0A0C4DH33 117 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 TRBV6-1A0A0K0K1D8 114 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 NPIPB5A8MRT5 1133 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 APOHP02749 345 aaPredicted RBP13.29□□□□□ -0.28
ACTB-207ENST00000462494 SPATA12Q7Z6I5 190 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 TMEM70Q9BUB7 260 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 AAMDCQ9H7C9 122 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 A0A1B0GUT8 65 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 OR2T8A6NH00 312 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 LINC00614P0C842 121 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 TFPI2P48307 235 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 CCDC144NLQ6NUI1 221 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 C16orf54Q6UWD8 224 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 C8orf49Q96NF6 230 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 NDFIP1Q9BT67 221 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 LPAR2Q9HBW0 351 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 ASH1LQ9NR48 2969 aaKnown RBP13.29□□□□□ -0.28
ACTB-207ENST00000462494 C21orf62Q9NYP8 219 aa13.29□□□□□ -0.28
ACTB-207ENST00000462494 CSN3P07498 182 aa13.28□□□□□ -0.28
ACTB-207ENST00000462494 ZFP36P26651 326 aaKnown RBP13.28□□□□□ -0.28
ACTB-207ENST00000462494 CRIP1P50238 77 aa13.28□□□□□ -0.28
ACTB-207ENST00000462494 LINC00173Q6ZV60 143 aa13.28□□□□□ -0.28
ACTB-207ENST00000462494 S100A7AQ86SG5 101 aa13.28□□□□□ -0.28
ACTB-207ENST00000462494 CHCHD1Q96BP2 118 aaKnown RBP13.28□□□□□ -0.28
ACTB-207ENST00000462494 WNK2Q9Y3S1 2297 aa13.28□□□□□ -0.28
ACTB-207ENST00000462494 COL6A6A6NMZ7 2263 aa13.28□□□□□ -0.28
ACTB-207ENST00000462494 TRAV9-2A0A087WT02 112 aa13.28□□□□□ -0.28
ACTB-207ENST00000462494 F8W735 103 aaPredicted RBP13.28□□□□□ -0.28
ACTB-207ENST00000462494 NDUFB8O95169 186 aa13.28□□□□□ -0.28
ACTB-207ENST00000462494 FAM120AOSQ5T036 256 aa13.28□□□□□ -0.28
ACTB-207ENST00000462494 TTC9CQ8N5M4 171 aa13.28□□□□□ -0.28
ACTB-207ENST00000462494 TIMM8BQ9Y5J9 83 aaPredicted RBP13.28□□□□□ -0.28
ACTB-207ENST00000462494 NDUFS7O75251 213 aa13.27□□□□□ -0.28
ACTB-207ENST00000462494 LEPROTL1O95214 131 aa13.27□□□□□ -0.28
ACTB-207ENST00000462494 TMEM11P17152 192 aa13.27□□□□□ -0.28
ACTB-207ENST00000462494 UCNP55089 124 aa13.27□□□□□ -0.28
ACTB-207ENST00000462494 CT45A10P0DMU9 189 aa13.27□□□□□ -0.29
ACTB-207ENST00000462494 RIGQ13278 110 aa13.27□□□□□ -0.29
ACTB-207ENST00000462494 COL5A1-AS1Q5SY13 56 aa13.27□□□□□ -0.29
ACTB-207ENST00000462494 TMEM208Q9BTX3 173 aa13.27□□□□□ -0.29
ACTB-207ENST00000462494 THYN1Q9P016 225 aa13.27□□□□□ -0.29
ACTB-207ENST00000462494 IGHV3OR16-8A0A075B7F1 116 aa13.26□□□□□ -0.29
ACTB-207ENST00000462494 TMSB15BA0A087X1C1 80 aa13.26□□□□□ -0.29
ACTB-207ENST00000462494 OVOL3O00110 214 aa13.26□□□□□ -0.29
ACTB-207ENST00000462494 IGLL1P15814 213 aa13.26□□□□□ -0.29
ACTB-207ENST00000462494 CSN1S1P47710 185 aa13.26□□□□□ -0.29
ACTB-207ENST00000462494 MED13LQ71F56 2210 aa13.26□□□□□ -0.29
ACTB-207ENST00000462494 IGHV3-35A0A0C4DH35 117 aa13.25□□□□□ -0.29
ACTB-207ENST00000462494 LAMTOR2Q9Y2Q5 125 aa13.25□□□□□ -0.29
ACTB-207ENST00000462494 IGKV2-40A0A087WW87 121 aaPredicted RBP13.25□□□□□ -0.29
ACTB-207ENST00000462494 IGKV2D-40P01614 121 aaPredicted RBP13.25□□□□□ -0.29
ACTB-207ENST00000462494 PDE6HQ13956 83 aa13.25□□□□□ -0.29
ACTB-207ENST00000462494 ZNF124Q15973 351 aa13.25□□□□□ -0.29
ACTB-207ENST00000462494 OR4C46A6NHA9 309 aa13.24□□□□□ -0.29
ACTB-207ENST00000462494 H0Y8G0 127 aa13.24□□□□□ -0.29
ACTB-207ENST00000462494 SYS1-DBNDD2H3BUS1 97 aa13.24□□□□□ -0.29
ACTB-207ENST00000462494 TSPOP30536 169 aa13.24□□□□□ -0.29
ACTB-207ENST00000462494 Q8N6K4 173 aa13.24□□□□□ -0.29
ACTB-207ENST00000462494 TMEM190Q8WZ59 177 aa13.24□□□□□ -0.29
ACTB-207ENST00000462494 ZNF48Q96MX3 618 aaPredicted RBP13.24□□□□□ -0.29
ACTB-207ENST00000462494 TMUB1Q9BVT8 246 aa13.24□□□□□ -0.29
ACTB-207ENST00000462494 C1RLQ9NZP8 487 aa13.24□□□□□ -0.29
ACTB-207ENST00000462494 SPTBN1Q01082 2364 aaKnown RBP13.24□□□□□ -0.29
ACTB-207ENST00000462494 A0A1W2PPR1 153 aa13.24□□□□□ -0.29
ACTB-207ENST00000462494 IGFL4Q6B9Z1 124 aa13.24□□□□□ -0.29
ACTB-207ENST00000462494 C1orf122Q6ZSJ8 110 aa13.24□□□□□ -0.29
ACTB-207ENST00000462494 IGHV7-81A0A0B4J1V7 117 aa13.23□□□□□ -0.29
ACTB-207ENST00000462494 PSG9Q00887 426 aa13.23□□□□□ -0.29
ACTB-207ENST00000462494 MINOS1Q5TGZ0 78 aa13.23□□□□□ -0.29
ACTB-207ENST00000462494 STPG4Q8N801 248 aa13.23□□□□□ -0.29
ACTB-207ENST00000462494 MINOS1-NBL1R4GNA1 71 aa13.23□□□□□ -0.29
ACTB-207ENST00000462494 SERTM2A0A1B0GWG4 89 aa13.23□□□□□ -0.29
ACTB-207ENST00000462494 DLEU1O43261 78 aa13.23□□□□□ -0.29
ACTB-207ENST00000462494 CTSGP08311 255 aa13.23□□□□□ -0.29
ACTB-207ENST00000462494 EGR2P11161 476 aaPredicted RBP13.23□□□□□ -0.29
ACTB-207ENST00000462494 RPL7P18124 248 aaKnown RBP13.23□□□□□ -0.29
ACTB-207ENST00000462494 HINT1P49773 126 aaPredicted RBP13.23□□□□□ -0.29
ACTB-207ENST00000462494 C20orf202A1L168 122 aa13.22□□□□□ -0.29
ACTB-207ENST00000462494 TMEM189A5PLL7 270 aa13.22□□□□□ -0.29
ACTB-207ENST00000462494 OOSP1A8MZH6 123 aa13.22□□□□□ -0.29
ACTB-207ENST00000462494 DTX2Q86UW9 622 aa13.22□□□□□ -0.29
ACTB-207ENST00000462494 MCRIP2Q9BUT9 160 aaKnown RBP13.22□□□□□ -0.29
ACTB-207ENST00000462494 UBTD1Q9HAC8 227 aa13.22□□□□□ -0.29
ACTB-207ENST00000462494 RABAC1Q9UI14 185 aa13.22□□□□□ -0.29
ACTB-207ENST00000462494 MUC21A0A0G2JKD1 596 aa13.21□□□□□ -0.29
ACTB-207ENST00000462494 MUC21A0A140T8X8 626 aa13.21□□□□□ -0.29
ACTB-207ENST00000462494 CRXO43186 299 aaPredicted RBP13.21□□□□□ -0.29
ACTB-207ENST00000462494 SH2D1AO60880 128 aa13.21□□□□□ -0.29
ACTB-207ENST00000462494 SCGB2A1O75556 95 aa13.21□□□□□ -0.29
ACTB-207ENST00000462494 RELQ04864 619 aaPredicted RBP13.21□□□□□ -0.29
ACTB-207ENST00000462494 EBI3Q14213 229 aa13.21□□□□□ -0.29
ACTB-207ENST00000462494 ECSCRQ19T08 205 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms