RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 FAM168AQ92567 244 aa6.12□□□□□ -1.43
HDAC9-218ENST00000456174 HEYLQ9NQ87 328 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-218ENST00000456174 RNF7Q9UBF6 113 aa6.12□□□□□ -1.43
HDAC9-218ENST00000456174 SLC25A10Q9UBX3 287 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-218ENST00000456174 SOX21Q9Y651 276 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-218ENST00000456174 ATRXP46100 2492 aa6.12□□□□□ -1.43
HDAC9-218ENST00000456174 SPTA1P02549 2419 aa6.12□□□□□ -1.43
HDAC9-218ENST00000456174 DIDO1Q9BTC0 2240 aaKnown RBP6.12□□□□□ -1.43
HDAC9-218ENST00000456174 OOEPA6NGQ2 149 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 C12orf77C9JDV5 145 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 IGLV2-14P01704 120 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 SLC25A5P05141 298 aaKnown RBP6.11□□□□□ -1.43
HDAC9-218ENST00000456174 ADORA2A-AS1P86434 159 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 PSMG4Q5JS54 123 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 Q6Q795 121 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 BCL6BQ8N143 479 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-218ENST00000456174 OR9G1Q8NH87 305 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 RNASE6Q93091 150 aaKnown RBP6.11□□□□□ -1.43
HDAC9-218ENST00000456174 PLPPR2Q96GM1 343 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 TPPP3Q9BW30 176 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 TCRBV4S1A1TA0A5B7 111 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 C15orf62A8K5M9 175 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 C17orf100A8MU93 164 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 SHISA9B4DS77 424 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 FNDC10F2Z333 226 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 K7ERJ3 54 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 HBBP68871 147 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 CCL8P80075 99 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 SRSF1Q07955 248 aaKnown RBP eCLIP6.11□□□□□ -1.43
HDAC9-218ENST00000456174 FAM201AQ5SY85 155 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 TREML4Q6UXN2 200 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 LINC01560Q8TB33 94 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 PPDPFLQ8WWR9 84 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 TANC2Q9HCD6 1990 aa6.11□□□□□ -1.43
HDAC9-218ENST00000456174 TMEM213A2RRL7 107 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 A8MWL6 223 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 MGST3O14880 152 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 TNFRSF1AP19438 455 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 GCSHP23434 173 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 EDDM3AQ14507 147 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 TMEM78Q5T7P6 136 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 CFAP126Q5VTH2 177 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 NFE4Q86UQ8 179 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 ZCCHC24Q8N2G6 241 aaKnown RBP6.1□□□□□ -1.43
HDAC9-218ENST00000456174 FGFRL1Q8N441 504 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 RNF152Q8N8N0 203 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 OR13A1Q8NGR1 328 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 MGST2Q99735 147 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 SSBP3Q9BWW4 388 aaPredicted RBP6.1□□□□□ -1.43
HDAC9-218ENST00000456174 MAP1LC3AQ9H492 121 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 TMEM167BQ9NRX6 74 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 DSCAML1Q8TD84 2053 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 CACNA1AO00555 2505 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.1□□□□□ -1.43
HDAC9-218ENST00000456174 E7EQL1 145 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 TMEM262E9PQX1 116 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 ZG16O60844 167 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 RBP4P02753 201 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 CD3EP07766 207 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 SMCPP49901 116 aaPredicted RBP6.1□□□□□ -1.43
HDAC9-218ENST00000456174 CDSNQ15517 529 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 ZNRF1Q8ND25 227 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 DEFB108BQ8NET1 73 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 RPEQ96AT9 228 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 DNAJC30Q96LL9 226 aa6.1□□□□□ -1.43
HDAC9-218ENST00000456174 COL6A6A6NMZ7 2263 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 HCFC1P51610 2035 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 SMIM9A6NGZ8 99 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 TNFRSF6BO95407 300 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 CAMPP49913 170 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 FOXA3P55318 350 aaPredicted RBP6.09□□□□□ -1.43
HDAC9-218ENST00000456174 EFNB3Q15768 340 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 RRN3P1Q2M238 152 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 MIC13Q5XKP0 118 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 PCP2Q8IVA1 136 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 CEND1Q8N111 149 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 TMEM116Q8NCL8 245 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 DCTN5Q9BTE1 182 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 TRAV5A0A0B4J249 113 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 HIGD1CA8MV81 97 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 SPINT2O43291 252 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 PLAUP00749 431 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 CSN1S1P47710 185 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 RFESDQ8TAC1 157 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 CARD19Q96LW7 228 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 SRSF8Q9BRL6 282 aaKnown RBP6.09□□□□□ -1.43
HDAC9-218ENST00000456174 CHAC1Q9BUX1 264 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 RAB9BQ9NP90 201 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 ZNF355PQ9NSJ1 428 aa6.09□□□□□ -1.43
HDAC9-218ENST00000456174 NHP2Q9NX24 153 aaKnown RBP6.09□□□□□ -1.43
HDAC9-218ENST00000456174 ROS1P08922 2347 aa6.08□□□□□ -1.44
HDAC9-218ENST00000456174 ARFGEF3Q5TH69 2177 aa6.08□□□□□ -1.44
HDAC9-218ENST00000456174 NPIPB6E9PJ23 425 aa6.08□□□□□ -1.44
HDAC9-218ENST00000456174 C15orf65H3BRN8 121 aa6.08□□□□□ -1.44
HDAC9-218ENST00000456174 IFITM1P13164 125 aa6.08□□□□□ -1.44
HDAC9-218ENST00000456174 TAL2Q16559 108 aa6.08□□□□□ -1.44
HDAC9-218ENST00000456174 FAM53AQ6NSI3 398 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-218ENST00000456174 AMTNQ6UX39 209 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms