RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 TMEM241Q24JQ0 296 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 VMA21Q3ZAQ7 101 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 CT83Q5H943 113 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 RBMS3Q6XE24 437 aaKnown RBP3.72□□□□□ -1.81
RIF1-207ENST00000454583 SFRP2Q96HF1 295 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 SHANK2-AS3Q9BTD1 123 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 CNFNQ9BYD5 112 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 EIF5A2Q9GZV4 153 aaKnown RBP3.72□□□□□ -1.81
RIF1-207ENST00000454583 PLEKHA3Q9HB20 300 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 OSTCQ9NRP0 149 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 RNF114Q9Y508 228 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 KMT2CQ8NEZ4 4911 aaKnown RBP3.72□□□□□ -1.81
RIF1-207ENST00000454583 TRBV7-1A0A0A6YYK4 115 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 CEBPZOSA8MTT3 80 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 BUB3O43684 328 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 NUPR1O60356 82 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 OR2J3O76001 311 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 PRH1P02810 166 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 GIG44P09565 113 aaPredicted RBP3.72□□□□□ -1.81
RIF1-207ENST00000454583 GATA2P23769 480 aaPredicted RBP3.72□□□□□ -1.81
RIF1-207ENST00000454583 PQLC2Q6ZP29 291 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 TMEM136Q6ZRR5 245 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 NECAP1Q8NC96 275 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 C20orf24Q9BUV8 137 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 NPFFR1Q9GZQ6 430 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 U3KQK5 164 aa3.72□□□□□ -1.81
RIF1-207ENST00000454583 PGPEP1LA6NFU8 196 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 ZNF98A6NK75 572 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 MT-CO2P00403 227 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 LGALS1P09382 135 aaKnown RBP3.71□□□□□ -1.82
RIF1-207ENST00000454583 OR10J1P30954 320 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 RPL35P42766 123 aaKnown RBP3.71□□□□□ -1.82
RIF1-207ENST00000454583 TAS2R60P59551 318 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 RAB4BP61018 213 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 RHOBP62745 196 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 PYY3Q5JQD4 70 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 GFI1BQ5VTD9 330 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 TEX29Q8N6K0 151 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 POM121L12Q8N7R1 296 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 SCGB1C1Q8TD33 95 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 RNF2Q99496 336 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 AP4M1O00189 453 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 CORTO00230 105 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 TGOLN2O43493 480 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 REG1AP05451 166 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 TRGC1P0CF51 173 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 SMIM6P0DI80 62 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 CD28P10747 220 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 ERVK-16P61578 105 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 Q0VG73 95 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 OR5I1Q13606 314 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 MMDQ15546 238 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 BEAN1Q3B7T3 259 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 RASL11AQ6T310 242 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 DEFB125Q8N687 156 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.71□□□□□ -1.82
RIF1-207ENST00000454583 TMEM75Q8N9X5 138 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 GTSF1Q8WW33 167 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 USMG5Q96IX5 58 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 IL36BQ9NZH7 164 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 TRAV2A0A0B4J234 112 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 FAM181BA6NEQ2 426 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 SMAD7O15105 426 aaKnown RBP3.71□□□□□ -1.82
RIF1-207ENST00000454583 HIST1H1BP16401 226 aaKnown RBP3.71□□□□□ -1.82
RIF1-207ENST00000454583 BRS3P32247 399 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 OR1L6Q8NGR2 347 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 DNAJC4Q9NNZ3 241 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 RPS10P5Q9NQ39 176 aa3.71□□□□□ -1.82
RIF1-207ENST00000454583 RP1L1Q8IWN7 2480 aaPredicted RBP3.7□□□□□ -1.82
RIF1-207ENST00000454583 TRBV19A0A075B6N1 114 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 SLC17A3O00476 420 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 TRGC2P03986 189 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 TCF24Q7RTU0 167 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 LYPD1Q8N2G4 141 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 HIST1H2BLQ99880 126 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 IGHV4OR15-8A0A075B7B6 117 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 A0A087WW49 117 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 NDUFA4O00483 81 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 ATF4P18848 351 aaPredicted RBP3.7□□□□□ -1.82
RIF1-207ENST00000454583 MEOX2P50222 304 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 FAM3BP58499 235 aaPredicted RBP3.7□□□□□ -1.82
RIF1-207ENST00000454583 SNRPEP62304 92 aaKnown RBP3.7□□□□□ -1.82
RIF1-207ENST00000454583 C20orf173Q96LM9 149 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 GFRA4Q9GZZ7 299 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 BIN3Q9NQY0 253 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 TMEM167BQ9NRX6 74 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 ABCA1O95477 2261 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 VPS13BQ7Z7G8 4022 aa3.7□□□□□ -1.82
RIF1-207ENST00000454583 A8MZ25 164 aa3.69□□□□□ -1.82
RIF1-207ENST00000454583 HMGB3O15347 200 aaKnown RBP3.69□□□□□ -1.82
RIF1-207ENST00000454583 IFNA17P01571 189 aa3.69□□□□□ -1.82
RIF1-207ENST00000454583 PSG1P11464 419 aa3.69□□□□□ -1.82
RIF1-207ENST00000454583 TNXAQ16473 311 aa3.69□□□□□ -1.82
RIF1-207ENST00000454583 PRR31Q5SQ13 230 aa3.69□□□□□ -1.82
RIF1-207ENST00000454583 AMTNQ6UX39 209 aa3.69□□□□□ -1.82
RIF1-207ENST00000454583 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.69□□□□□ -1.82
RIF1-207ENST00000454583 ZNF493Q6ZR52 646 aa3.69□□□□□ -1.82
RIF1-207ENST00000454583 TMEM183AQ8IXX5 376 aa3.69□□□□□ -1.82
RIF1-207ENST00000454583 NPIPB3Q92617 1050 aa3.69□□□□□ -1.82
RIF1-207ENST00000454583 FAM110AQ9BQ89 295 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms