RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 AP1S3Q96PC3 154 aa10.66□□□□□ -0.7
USP42-203ENST00000426246 CRYBG3Q68DQ2 2970 aa10.65□□□□□ -0.7
USP42-203ENST00000426246 TMEM213A2RRL7 107 aa10.65□□□□□ -0.7
USP42-203ENST00000426246 FAM90A9PA6NNJ1 464 aa10.65□□□□□ -0.7
USP42-203ENST00000426246 ZNF785A8K8V0 405 aa10.65□□□□□ -0.7
USP42-203ENST00000426246 IGHV1-3A0A0C4DH29 117 aa10.65□□□□□ -0.7
USP42-203ENST00000426246 TSPOP30536 169 aa10.65□□□□□ -0.7
USP42-203ENST00000426246 GTSF1Q8WW33 167 aa10.65□□□□□ -0.7
USP42-203ENST00000426246 MRPL32Q9BYC8 188 aaKnown RBP10.65□□□□□ -0.7
USP42-203ENST00000426246 SIGLEC9Q9Y336 463 aa10.65□□□□□ -0.7
USP42-203ENST00000426246 SHISA9B4DS77 424 aa10.65□□□□□ -0.71
USP42-203ENST00000426246 M0QZK8 103 aa10.65□□□□□ -0.71
USP42-203ENST00000426246 EVI2AP22794 236 aa10.65□□□□□ -0.71
USP42-203ENST00000426246 TWIST1Q15672 202 aa10.65□□□□□ -0.71
USP42-203ENST00000426246 TMEM167AQ8TBQ9 72 aa10.65□□□□□ -0.71
USP42-203ENST00000426246 SLC25A39Q9BZJ4 359 aaPredicted RBP10.65□□□□□ -0.71
USP42-203ENST00000426246 KLK15Q9H2R5 256 aa10.65□□□□□ -0.71
USP42-203ENST00000426246 VPS13CQ709C8 3753 aa10.64□□□□□ -0.71
USP42-203ENST00000426246 IGKV1D-37A0A075B6S9 117 aa10.64□□□□□ -0.71
USP42-203ENST00000426246 K7EMI3 77 aa10.64□□□□□ -0.71
USP42-203ENST00000426246 Q0VG73 95 aa10.64□□□□□ -0.71
USP42-203ENST00000426246 ALKBH7Q9BT30 221 aaPredicted RBP10.64□□□□□ -0.71
USP42-203ENST00000426246 PRSS57Q6UWY2 283 aa10.64□□□□□ -0.71
USP42-203ENST00000426246 ZNF833PQ6ZTB9 187 aa10.64□□□□□ -0.71
USP42-203ENST00000426246 SPATA12Q7Z6I5 190 aa10.64□□□□□ -0.71
USP42-203ENST00000426246 MAP1LC3CQ9BXW4 147 aa10.64□□□□□ -0.71
USP42-203ENST00000426246 UFC1Q9Y3C8 167 aa10.64□□□□□ -0.71
USP42-203ENST00000426246 MC5RP33032 325 aa10.64□□□□□ -0.71
USP42-203ENST00000426246 WFDC12Q8WWY7 111 aa10.64□□□□□ -0.71
USP42-203ENST00000426246 IGF2BP2-AS1Q96M15 143 aa10.64□□□□□ -0.71
USP42-203ENST00000426246 AAMDCQ9H7C9 122 aa10.64□□□□□ -0.71
USP42-203ENST00000426246 SMIM27A0A1W2PRY6 76 aa10.63□□□□□ -0.71
USP42-203ENST00000426246 IGLC7A0M8Q6 106 aa10.63□□□□□ -0.71
USP42-203ENST00000426246 LINC00614P0C842 121 aa10.63□□□□□ -0.71
USP42-203ENST00000426246 FAM106CPP0CH98 169 aa10.63□□□□□ -0.71
USP42-203ENST00000426246 COMPP49747 757 aaPredicted RBP10.63□□□□□ -0.71
USP42-203ENST00000426246 FAM106AQ4KMX7 169 aa10.63□□□□□ -0.71
USP42-203ENST00000426246 TRBV9A0A0B4J1U6 114 aa10.63□□□□□ -0.71
USP42-203ENST00000426246 K7EQM0 130 aa10.63□□□□□ -0.71
USP42-203ENST00000426246 CSN1S1P47710 185 aa10.63□□□□□ -0.71
USP42-203ENST00000426246 BPIFA4PQ86YQ2 179 aa10.63□□□□□ -0.71
USP42-203ENST00000426246 AMN1Q8IY45 258 aa10.63□□□□□ -0.71
USP42-203ENST00000426246 C20orf144Q9BQM9 153 aa10.63□□□□□ -0.71
USP42-203ENST00000426246 UBTD1Q9HAC8 227 aa10.63□□□□□ -0.71
USP42-203ENST00000426246 OR10J3Q5JRS4 329 aa10.62□□□□□ -0.71
USP42-203ENST00000426246 AP5S1Q9NUS5 200 aa10.62□□□□□ -0.71
USP42-203ENST00000426246 NAV2Q8IVL1 2488 aa10.62□□□□□ -0.71
USP42-203ENST00000426246 TRAV9-2A0A087WT02 112 aa10.62□□□□□ -0.71
USP42-203ENST00000426246 GPR183P32249 361 aa10.62□□□□□ -0.71
USP42-203ENST00000426246 CHRDL1Q9BU40 450 aa10.62□□□□□ -0.71
USP42-203ENST00000426246 TMEM191AQ9H0A3 160 aa10.62□□□□□ -0.71
USP42-203ENST00000426246 PAX1P15863 534 aa10.61□□□□□ -0.71
USP42-203ENST00000426246 IFI27P40305 119 aaPredicted RBP10.61□□□□□ -0.71
USP42-203ENST00000426246 RELQ04864 619 aaPredicted RBP10.61□□□□□ -0.71
USP42-203ENST00000426246 RBPMS2Q6ZRY4 209 aaKnown RBP10.61□□□□□ -0.71
USP42-203ENST00000426246 ZNF738Q8NE65 137 aa10.61□□□□□ -0.71
USP42-203ENST00000426246 IGHV1-24A0A0C4DH33 117 aa10.61□□□□□ -0.71
USP42-203ENST00000426246 LGALS7P47929 136 aa10.61□□□□□ -0.71
USP42-203ENST00000426246 USP24Q9UPU5 2620 aa10.61□□□□□ -0.71
USP42-203ENST00000426246 HLA-DRB1P01911 266 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 PRSS1P07477 247 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 MEF2CQ06413 473 aaPredicted RBP10.6□□□□□ -0.71
USP42-203ENST00000426246 RNF182Q8N6D2 247 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 STXBP6Q8NFX7 210 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 C19orf24Q9BVV8 132 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 MTORP42345 2549 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 A0A1B0GUT8 65 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 D6R8Y8 96 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 ZNF672Q499Z4 452 aaPredicted RBP10.6□□□□□ -0.71
USP42-203ENST00000426246 RNF125Q96EQ8 232 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 PSG8Q9UQ74 426 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 BUB1B-PAK6H3BSN5 160 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 IGLV2-23P01705 113 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 CKS2P33552 79 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 SLC25A34Q6PIV7 304 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 TTTY13Q9BZ97 58 aa10.6□□□□□ -0.71
USP42-203ENST00000426246 TMEM189A5PLL7 270 aa10.59□□□□□ -0.71
USP42-203ENST00000426246 CCL25O15444 150 aa10.59□□□□□ -0.71
USP42-203ENST00000426246 NDPQ00604 133 aa10.59□□□□□ -0.71
USP42-203ENST00000426246 LOXL1Q08397 574 aaPredicted RBP10.59□□□□□ -0.71
USP42-203ENST00000426246 ERCC8Q13216 396 aa10.59□□□□□ -0.71
USP42-203ENST00000426246 CR1LQ2VPA4 569 aa10.59□□□□□ -0.71
USP42-203ENST00000426246 TMEM219Q86XT9 240 aa10.59□□□□□ -0.71
USP42-203ENST00000426246 C8orf46Q8TAG6 207 aa10.59□□□□□ -0.71
USP42-203ENST00000426246 AMMECR1LQ6DCA0 310 aa10.59□□□□□ -0.71
USP42-203ENST00000426246 LYZL1Q6UWQ5 148 aa10.59□□□□□ -0.71
USP42-203ENST00000426246 SFTPCP11686 197 aa10.59□□□□□ -0.71
USP42-203ENST00000426246 APOBEC3AP31941 199 aaPredicted RBP10.59□□□□□ -0.71
USP42-203ENST00000426246 CACNG7P62955 275 aa10.59□□□□□ -0.71
USP42-203ENST00000426246 TMEM155Q4W5P6 130 aa10.59□□□□□ -0.71
USP42-203ENST00000426246 OR4A5Q8NH83 315 aa10.59□□□□□ -0.71
USP42-203ENST00000426246 MSRB1Q9NZV6 116 aa10.59□□□□□ -0.71
USP42-203ENST00000426246 SYS1-DBNDD2H3BUS1 97 aa10.58□□□□□ -0.72
USP42-203ENST00000426246 JMJD1CQ15652 2540 aa10.58□□□□□ -0.72
USP42-203ENST00000426246 GLMPQ8WWB7 406 aa10.58□□□□□ -0.72
USP42-203ENST00000426246 THYN1Q9P016 225 aa10.58□□□□□ -0.72
USP42-203ENST00000426246 DEFB1P60022 68 aa10.58□□□□□ -0.72
USP42-203ENST00000426246 TEX36Q5VZQ5 186 aa10.58□□□□□ -0.72
USP42-203ENST00000426246 SFTA2Q6UW10 78 aa10.58□□□□□ -0.72
USP42-203ENST00000426246 TIMD4Q96H15 378 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms