RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 TMEM189A5PLL7 270 aa11.98□□□□□ -0.49
C9orf3-204ENST00000424143 C9orf118A6NHY6 69 aa11.98□□□□□ -0.49
C9orf3-204ENST00000424143 NDUFA3O95167 84 aa11.98□□□□□ -0.49
C9orf3-204ENST00000424143 HBDP02042 147 aa11.98□□□□□ -0.49
C9orf3-204ENST00000424143 RPEQ96AT9 228 aa11.98□□□□□ -0.49
C9orf3-204ENST00000424143 PRELID3AQ96N28 172 aa11.98□□□□□ -0.49
C9orf3-204ENST00000424143 DYNLRB1Q9NP97 96 aa11.98□□□□□ -0.49
C9orf3-204ENST00000424143 IGHV3-21A0A0B4J1V1 117 aa11.97□□□□□ -0.49
C9orf3-204ENST00000424143 C7orf71A4D174 169 aa11.97□□□□□ -0.49
C9orf3-204ENST00000424143 NPIPB5A8MRT5 1133 aa11.97□□□□□ -0.49
C9orf3-204ENST00000424143 CSN3P07498 182 aa11.97□□□□□ -0.49
C9orf3-204ENST00000424143 LHFPL4Q7Z7J7 247 aa11.97□□□□□ -0.49
C9orf3-204ENST00000424143 LY6G5BQ8NDX9 201 aa11.97□□□□□ -0.49
C9orf3-204ENST00000424143 CNFNQ9BYD5 112 aa11.97□□□□□ -0.49
C9orf3-204ENST00000424143 FREM2Q5SZK8 3169 aa11.97□□□□□ -0.49
C9orf3-204ENST00000424143 MALRD1Q5VYJ5 2156 aa11.97□□□□□ -0.49
C9orf3-204ENST00000424143 TRAV8-6A0A0B4J262 113 aa11.97□□□□□ -0.49
C9orf3-204ENST00000424143 E7EQL1 145 aa11.97□□□□□ -0.49
C9orf3-204ENST00000424143 SMAD7O15105 426 aaKnown RBP11.97□□□□□ -0.49
C9orf3-204ENST00000424143 BMI1P35226 326 aa11.97□□□□□ -0.49
C9orf3-204ENST00000424143 IFI27P40305 119 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-204ENST00000424143 C21orf62-AS1Q17RA5 79 aa11.97□□□□□ -0.49
C9orf3-204ENST00000424143 PLXNB1O43157 2135 aa11.96□□□□□ -0.49
C9orf3-204ENST00000424143 NCOR1O75376 2440 aa11.96□□□□□ -0.49
C9orf3-204ENST00000424143 GAGE12BA1L429 117 aa11.96□□□□□ -0.5
C9orf3-204ENST00000424143 CBY3A6NI87 242 aa11.96□□□□□ -0.5
C9orf3-204ENST00000424143 NCR2O95944 276 aa11.96□□□□□ -0.5
C9orf3-204ENST00000424143 FCGR2BP31994 310 aaPredicted RBP11.96□□□□□ -0.5
C9orf3-204ENST00000424143 MFAP4P55083 255 aa11.96□□□□□ -0.5
C9orf3-204ENST00000424143 LDLRAD2Q5SZI1 272 aa11.96□□□□□ -0.5
C9orf3-204ENST00000424143 LYZL1Q6UWQ5 148 aa11.96□□□□□ -0.5
C9orf3-204ENST00000424143 PIP4P2Q8N4L2 257 aa11.96□□□□□ -0.5
C9orf3-204ENST00000424143 OR11H6Q8NGC7 330 aa11.96□□□□□ -0.5
C9orf3-204ENST00000424143 C17orf77Q96MU5 243 aa11.96□□□□□ -0.5
C9orf3-204ENST00000424143 CUL9Q8IWT3 2517 aa11.95□□□□□ -0.5
C9orf3-204ENST00000424143 A1L4Q6 167 aa11.95□□□□□ -0.5
C9orf3-204ENST00000424143 D6R8Y8 96 aa11.95□□□□□ -0.5
C9orf3-204ENST00000424143 SH2D1AO60880 128 aa11.95□□□□□ -0.5
C9orf3-204ENST00000424143 IGLC6P0CF74 106 aa11.95□□□□□ -0.5
C9orf3-204ENST00000424143 RPL7P18124 248 aaKnown RBP11.95□□□□□ -0.5
C9orf3-204ENST00000424143 MRPL51Q4U2R6 128 aaKnown RBP11.95□□□□□ -0.5
C9orf3-204ENST00000424143 HIGD1BQ9P298 99 aa11.95□□□□□ -0.5
C9orf3-204ENST00000424143 RABAC1Q9UI14 185 aa11.95□□□□□ -0.5
C9orf3-204ENST00000424143 FRYQ5TBA9 3013 aa11.95□□□□□ -0.5
C9orf3-204ENST00000424143 IGLV11-55A0A075B6I3 123 aa11.94□□□□□ -0.5
C9orf3-204ENST00000424143 GAGE10A6NGK3 116 aa11.94□□□□□ -0.5
C9orf3-204ENST00000424143 NBR2O15453 112 aa11.94□□□□□ -0.5
C9orf3-204ENST00000424143 SCGB2A1O75556 95 aa11.94□□□□□ -0.5
C9orf3-204ENST00000424143 IL4P05112 153 aa11.94□□□□□ -0.5
C9orf3-204ENST00000424143 HLA-DRB4P13762 266 aa11.94□□□□□ -0.5
C9orf3-204ENST00000424143 TP73-AS1Q9UF72 201 aa11.94□□□□□ -0.5
C9orf3-204ENST00000424143 HLA-DRB4X5D2U9 266 aa11.94□□□□□ -0.5
C9orf3-204ENST00000424143 ARFGEF3Q5TH69 2177 aa11.94□□□□□ -0.5
C9orf3-204ENST00000424143 SVILO95425 2214 aa11.94□□□□□ -0.5
C9orf3-204ENST00000424143 PPIAL4CA0A0B4J2A2 164 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 CNIH1O95406 144 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 PPIAL4GP0DN37 164 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 KLK9Q2XQG4 91 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 ADAMTSL5Q6ZMM2 481 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 IFI27L1Q96BM0 104 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 PRR25Q96S07 402 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 ZMAT4Q9H898 229 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 KLK9Q9UKQ9 250 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 NHLH1Q02575 133 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 TTC9CQ8N5M4 171 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 OR5A1Q8NGJ0 315 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 CFHR4Q92496 578 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 AP1S3Q96PC3 154 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 PSMG3-AS1Q96PY0 264 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 DPM3Q9P2X0 92 aa11.93□□□□□ -0.5
C9orf3-204ENST00000424143 K7EP34 96 aa11.92□□□□□ -0.5
C9orf3-204ENST00000424143 APELAP0DMC3 54 aa11.92□□□□□ -0.5
C9orf3-204ENST00000424143 PRR31Q5SQ13 230 aa11.92□□□□□ -0.5
C9orf3-204ENST00000424143 GFRALQ6UXV0 394 aa11.92□□□□□ -0.5
C9orf3-204ENST00000424143 Q71RC1 249 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-204ENST00000424143 C8orf49Q96NF6 230 aa11.92□□□□□ -0.5
C9orf3-204ENST00000424143 SMPXQ9UHP9 88 aa11.92□□□□□ -0.5
C9orf3-204ENST00000424143 VPS13AQ96RL7 3174 aa11.91□□□□□ -0.5
C9orf3-204ENST00000424143 OOSP1A8MZH6 123 aa11.91□□□□□ -0.5
C9orf3-204ENST00000424143 GNG7O60262 68 aa11.91□□□□□ -0.5
C9orf3-204ENST00000424143 AMN1Q8IY45 258 aa11.91□□□□□ -0.5
C9orf3-204ENST00000424143 FER1L6-AS1Q8NA97 138 aa11.91□□□□□ -0.5
C9orf3-204ENST00000424143 OR8A1Q8NGG7 326 aa11.91□□□□□ -0.5
C9orf3-204ENST00000424143 FANCD2OSQ96PS1 177 aa11.91□□□□□ -0.5
C9orf3-204ENST00000424143 VPS25Q9BRG1 176 aa11.91□□□□□ -0.5
C9orf3-204ENST00000424143 MCRIP2Q9BUT9 160 aaKnown RBP11.91□□□□□ -0.5
C9orf3-204ENST00000424143 NXT2Q9NPJ8 142 aaKnown RBP11.91□□□□□ -0.5
C9orf3-204ENST00000424143 TMEM213A2RRL7 107 aa11.9□□□□□ -0.5
C9orf3-204ENST00000424143 PRSS47A8MTI9 375 aa11.9□□□□□ -0.5
C9orf3-204ENST00000424143 M0R1W7 72 aa11.9□□□□□ -0.5
C9orf3-204ENST00000424143 M0R3E3 92 aa11.9□□□□□ -0.5
C9orf3-204ENST00000424143 TIMM23O14925 209 aa11.9□□□□□ -0.5
C9orf3-204ENST00000424143 NDUFS7O75251 213 aa11.9□□□□□ -0.5
C9orf3-204ENST00000424143 FAM106CPP0CH98 169 aa11.9□□□□□ -0.5
C9orf3-204ENST00000424143 CKS2P33552 79 aa11.9□□□□□ -0.5
C9orf3-204ENST00000424143 RAB9AP51151 201 aa11.9□□□□□ -0.5
C9orf3-204ENST00000424143 LOXL1Q08397 574 aaPredicted RBP11.9□□□□□ -0.5
C9orf3-204ENST00000424143 C5orf64Q2M2E5 130 aa11.9□□□□□ -0.5
C9orf3-204ENST00000424143 FAM106AQ4KMX7 169 aa11.9□□□□□ -0.5
C9orf3-204ENST00000424143 ZNF562Q6V9R5 426 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms