RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 CASC2Q6XLA1 102 aa-0.36□□□□□ -2.47
RNU2-54P-201ENST00000410299 ARL17AQ8IVW1 177 aa-0.36□□□□□ -2.47
RNU2-54P-201ENST00000410299 CLDN22Q8N7P3 220 aa-0.36□□□□□ -2.47
RNU2-54P-201ENST00000410299 OR51A2Q8NGJ7 313 aa-0.36□□□□□ -2.47
RNU2-54P-201ENST00000410299 OR5D16Q8NGK9 328 aa-0.36□□□□□ -2.47
RNU2-54P-201ENST00000410299 POP5Q969H6 163 aaKnown RBP-0.36□□□□□ -2.47
RNU2-54P-201ENST00000410299 PLEKHB2Q96CS7 222 aa-0.36□□□□□ -2.47
RNU2-54P-201ENST00000410299 TEX37Q96LM6 180 aa-0.36□□□□□ -2.47
RNU2-54P-201ENST00000410299 HYLS1Q96M11 299 aa-0.36□□□□□ -2.47
RNU2-54P-201ENST00000410299 NKIRAS1Q9NYS0 192 aa-0.36□□□□□ -2.47
RNU2-54P-201ENST00000410299 GLTPQ9NZD2 209 aa-0.36□□□□□ -2.47
RNU2-54P-201ENST00000410299 ARL5AQ9Y689 179 aa-0.36□□□□□ -2.47
RNU2-54P-201ENST00000410299 NCOR1O75376 2440 aa-0.36□□□□□ -2.47
RNU2-54P-201ENST00000410299 PTPRDP23468 1912 aa-0.36□□□□□ -2.47
RNU2-54P-201ENST00000410299 ZANQ9Y493 2812 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 RBBP6Q7Z6E9 1792 aaKnown RBP-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 PIK3C2GO75747 1445 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 A0A096LPI6 279 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 FAM159BA6NKW6 160 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 M0QX08 132 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 KPNA3O00505 521 aaPredicted RBP-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 HLA-EP13747 358 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 HIST1H3AP68431 136 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 H3F3AP84243 136 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 TMED1Q13445 227 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 XAF1Q6GPH4 301 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 TMEM14EPQ6UXP3 125 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 PATE2Q6UY27 113 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 S100A7AQ86SG5 101 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 FAM213BQ8TBF2 198 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 LIMD2Q9BT23 127 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 IMUPQ9GZP8 106 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 PARVBQ9HBI1 364 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 UQCC1Q9NVA1 299 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 LRP2P98164 4655 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 PTPN13Q12923 2485 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 CHD9Q3L8U1 2897 aa-0.37□□□□□ -2.47
RNU2-54P-201ENST00000410299 KIF1BO60333 1816 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 FAM208BQ5VWN6 2430 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 TRBV19A0A075B6N1 114 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 A0A087WUJ7 227 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 TRAV4A0A0B4J268 109 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 hDV103S1A0JD37 113 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 C9orf170A2RU37 121 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 TAX1BP3O14907 124 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 PDE6DO43924 150 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 SULT1C4O75897 302 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 IGHV3-30P01768 117 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 IGHV3-30-5P0DP03 117 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 EVI2AP22794 236 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 MYL6P60660 151 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 EDDM3AQ14507 147 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 FOXI2Q6ZQN5 318 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 LRRC18Q8N456 261 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 C5orf17Q8NAS9 161 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 PPTC7Q8NI37 304 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 CHCHD1Q96BP2 118 aaKnown RBP-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 ZHX1-C8orf76Q96EF9 292 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 NPCDR1Q9BY65 106 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 TRIM4Q9C037 500 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 RNASE7Q9H1E1 156 aaKnown RBP-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 POPDC3Q9HBV1 291 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 ATP6V1DQ9Y5K8 247 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 AHCTF1Q8WYP5 2266 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 NUP98P52948 1817 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 HSPG2P98160 4391 aa-0.38□□□□□ -2.47
RNU2-54P-201ENST00000410299 TMEM256-PLSCR3K7ERE1 68 aa-0.39□□□□□ -2.47
RNU2-54P-201ENST00000410299 PIAS1O75925 651 aa-0.39□□□□□ -2.47
RNU2-54P-201ENST00000410299 TPM3P06753 285 aa-0.39□□□□□ -2.47
RNU2-54P-201ENST00000410299 DYNLT3P51808 116 aa-0.39□□□□□ -2.47
RNU2-54P-201ENST00000410299 DEFA3P59666 94 aa-0.39□□□□□ -2.47
RNU2-54P-201ENST00000410299 MIR22HGQ0VDD5 57 aa-0.39□□□□□ -2.47
RNU2-54P-201ENST00000410299 IMPG1Q17R60 797 aa-0.39□□□□□ -2.47
RNU2-54P-201ENST00000410299 OR4K15Q8NH41 348 aa-0.39□□□□□ -2.47
RNU2-54P-201ENST00000410299 MALSU1Q96EH3 234 aa-0.39□□□□□ -2.47
RNU2-54P-201ENST00000410299 SRRM2Q9UQ35 2752 aaKnown RBP-0.39□□□□□ -2.47
RNU2-54P-201ENST00000410299 TRPM1Q7Z4N2 1603 aa-0.39□□□□□ -2.47
RNU2-54P-201ENST00000410299 NISCHQ9Y2I1 1504 aa-0.39□□□□□ -2.47
RNU2-54P-201ENST00000410299 CEP164Q9UPV0 1460 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 IFNA7P01567 189 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 TCRBP04435 133 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 RPS3P23396 243 aaKnown RBP eCLIP-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 ERP29P30040 261 aaKnown RBP-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 ATP5G3P48201 142 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 KLRD1Q13241 179 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 TMEM97Q5BJF2 176 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 DEFB132Q7Z7B7 95 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 OTUD6BQ8N6M0 293 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 GRPEL2Q8TAA5 225 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 GNPDA2Q8TDQ7 276 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 ARL5BQ96KC2 179 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 LLPHQ9BRT6 129 aaKnown RBP-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 PARD6GQ9BYG4 376 aaPredicted RBP-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 CST11Q9H112 138 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 CACYBPQ9HB71 228 aaKnown RBP-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 PRELID3BQ9Y3B1 194 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 CTTNBP2Q8WZ74 1663 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 UNC13BO14795 1591 aa-0.4□□□□□ -2.47
RNU2-54P-201ENST00000410299 NCAPD3P42695 1498 aa-0.41□□□□□ -2.47
RNU2-54P-201ENST00000410299 MYO5AQ9Y4I1 1855 aaKnown RBP-0.41□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms