RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 IGHV1-3A0A0C4DH29 117 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 C19orf71A6NCJ1 209 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 NDUFA3O95167 84 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 BRWD1-AS2P59051 145 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 GTSCR1Q86UQ5 136 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 KIR3DL3Q8N743 410 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 OR11H6Q8NGC7 330 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 FAM57AQ8TBR7 257 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 MRPL51Q4U2R6 128 aaKnown RBP6.91□□□□□ -1.3
GABRA1-202ENST00000393943 NPFFR1Q9GZQ6 430 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 USF3Q68DE3 2245 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 ZNF815PA8K554 130 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 TNFRSF6BO95407 300 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 GP9P14770 177 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 LHBP01229 141 aa6.9□□□□□ -1.3
GABRA1-202ENST00000393943 DAZAP2Q15038 168 aaPredicted RBP6.9□□□□□ -1.3
GABRA1-202ENST00000393943 TMEM158Q8WZ71 300 aa6.9□□□□□ -1.3
GABRA1-202ENST00000393943 CACNA1EQ15878 2313 aa6.9□□□□□ -1.3
GABRA1-202ENST00000393943 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.9□□□□□ -1.3
GABRA1-202ENST00000393943 HLA-DRB4P13762 266 aa6.9□□□□□ -1.3
GABRA1-202ENST00000393943 Q6ZVH6 145 aa6.9□□□□□ -1.3
GABRA1-202ENST00000393943 HLA-DRB4X5D2U9 266 aa6.9□□□□□ -1.3
GABRA1-202ENST00000393943 TRAV21A0A0B4J279 112 aa6.9□□□□□ -1.31
GABRA1-202ENST00000393943 ZNF418Q8TF45 676 aaPredicted RBP6.9□□□□□ -1.31
GABRA1-202ENST00000393943 ZNF503Q96F45 646 aa6.9□□□□□ -1.31
GABRA1-202ENST00000393943 LINC00310P59036 64 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 ECSCRQ19T08 205 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 ZNF493Q6ZR52 646 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 WFDC3Q8IUB2 231 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 PPDPFLQ8WWR9 84 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 ZC2HC1AQ96GY0 325 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 NAA38Q9BRA0 125 aaKnown RBP6.89□□□□□ -1.31
GABRA1-202ENST00000393943 LINC00574Q9H8X3 128 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 TSSC4Q9Y5U2 329 aaPredicted RBP6.89□□□□□ -1.31
GABRA1-202ENST00000393943 SRRM4A7MD48 611 aaKnown RBP6.89□□□□□ -1.31
GABRA1-202ENST00000393943 NPIPB6E9PJ23 425 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 Q8N7P7 452 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 NEU4Q8WWR8 484 aaPredicted RBP6.89□□□□□ -1.31
GABRA1-202ENST00000393943 NPIPB5A8MRT5 1133 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 NDUFS7O75251 213 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 CEACAM4O75871 244 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 TMEM155Q4W5P6 130 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 Q8N976 141 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 AZU1P20160 251 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 ATP5G2Q06055 141 aa6.89□□□□□ -1.31
GABRA1-202ENST00000393943 NCR2O95944 276 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 SLC25A16P16260 332 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 PATE2Q6UY27 113 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 MCRIP2Q9BUT9 160 aaKnown RBP6.88□□□□□ -1.31
GABRA1-202ENST00000393943 MLST8Q9BVC4 326 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 BUB1B-PAK6H3BSN5 160 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 OVOL1O14753 267 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 FRMD6-AS1P0C7T7 363 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 BSPH1Q075Z2 132 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 CIRBPQ14011 172 aaKnown RBP6.88□□□□□ -1.31
GABRA1-202ENST00000393943 ATP1A1-AS1Q5TC04 95 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 GTSF1Q8WW33 167 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 PRR25Q96S07 402 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 IGKV1OR2-108A0A075B7D4 117 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 TMEM8BA6NDV4 472 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 SPINK8P0C7L1 97 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 EVI2AP22794 236 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 SRSF2Q01130 221 aaKnown RBP6.88□□□□□ -1.31
GABRA1-202ENST00000393943 FAM27E3Q08E93 113 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 GAGE2BQ13066 116 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 GAGE2EQ4V326 116 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 TMEM170BQ5T4T1 132 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 RNASE6Q93091 150 aaKnown RBP6.88□□□□□ -1.31
GABRA1-202ENST00000393943 KLK15Q9H2R5 256 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 GAGE2DQ9UEU5 116 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 BRWD1Q9NSI6 2320 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 VKORC1Q9BQB6 163 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 DPH3P1Q9H4G8 78 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 KAAG1Q9UBP8 84 aa6.88□□□□□ -1.31
GABRA1-202ENST00000393943 IGKV2-40A0A087WW87 121 aaPredicted RBP6.87□□□□□ -1.31
GABRA1-202ENST00000393943 TMEM213A2RRL7 107 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 IGKV2D-40P01614 121 aaPredicted RBP6.87□□□□□ -1.31
GABRA1-202ENST00000393943 DEFB124Q8NES8 71 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 HEATR1Q9H583 2144 aaKnown RBP6.87□□□□□ -1.31
GABRA1-202ENST00000393943 PGPEP1Q9NXJ5 209 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 A0A1W2PRD5 423 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 A0A1W2PRF3 423 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 A0A1W2PRM7 423 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 KLK10O43240 276 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 CRYGCP07315 174 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 EXPH5Q8NEV8 1989 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 PTPRSQ13332 1948 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 TRAV8-2A0A0B4J237 113 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 F8VRH5 84 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 CGB3P0DN86 165 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 CGB7P0DN87 165 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 FAM159AQ6UWV7 190 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 FOXI2Q6ZQN5 318 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 C9orf139Q6ZV77 190 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 ATP6V0E2Q8NHE4 81 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 YAE1D1Q9NRH1 226 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 ZNF407Q9C0G0 2248 aa6.87□□□□□ -1.31
GABRA1-202ENST00000393943 MINOS1Q5TGZ0 78 aa6.86□□□□□ -1.31
GABRA1-202ENST00000393943 ZNF48Q96MX3 618 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms